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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20045X
         (339 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_33125| Best HMM Match : Pkinase (HMM E-Value=0)                     30   0.55 
SB_39434| Best HMM Match : JmjC (HMM E-Value=0.12)                     29   1.3  
SB_3889| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   1.7  
SB_42815| Best HMM Match : rve (HMM E-Value=0.00022)                   28   2.2  
SB_23517| Best HMM Match : WD40 (HMM E-Value=0)                        27   2.9  
SB_3171| Best HMM Match : No HMM Matches (HMM E-Value=.)               27   3.9  
SB_58599| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   5.1  
SB_51512| Best HMM Match : Abhydro_lipase (HMM E-Value=9.8e-06)        26   6.8  
SB_53067| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   6.8  
SB_20049| Best HMM Match : 7tm_1 (HMM E-Value=6.2e-05)                 26   6.8  
SB_48991| Best HMM Match : Rad52_Rad22 (HMM E-Value=5.2e-12)           26   9.0  
SB_41261| Best HMM Match : Metallothio_11 (HMM E-Value=0.74)           26   9.0  
SB_8246| Best HMM Match : No HMM Matches (HMM E-Value=.)               26   9.0  
SB_3503| Best HMM Match : Rad52_Rad22 (HMM E-Value=1e-24)              26   9.0  
SB_50904| Best HMM Match : NACHT (HMM E-Value=2.3e-05)                 26   9.0  
SB_8486| Best HMM Match : Granulin (HMM E-Value=0)                     26   9.0  
SB_1049| Best HMM Match : No HMM Matches (HMM E-Value=.)               26   9.0  

>SB_33125| Best HMM Match : Pkinase (HMM E-Value=0)
          Length = 937

 Score = 29.9 bits (64), Expect = 0.55
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 312 VLCNNFLCRCRPTACSSTPC 253
           V+C+ F+C+CR + C  T C
Sbjct: 765 VVCHRFICQCRMSLCCVTTC 784


>SB_39434| Best HMM Match : JmjC (HMM E-Value=0.12)
          Length = 672

 Score = 28.7 bits (61), Expect = 1.3
 Identities = 17/76 (22%), Positives = 31/76 (40%)
 Frame = -1

Query: 258 PCVPSLVNDQVVNYILDDGXXXXXLIFQALTDSTVVVAGEDAVVQFLLEVLVRSVRG*FN 79
           PC   L+N + +N  L DG     L F    +    ++G+  V+ +      R       
Sbjct: 446 PCAAGLLNRKHLNIWLSDGNTLGKLHFDPFENFLCQISGKKQVILYEPHDNTRLYEAHIQ 505

Query: 78  DARAGGEHAHRKYNEK 31
           ++     HAH+++  K
Sbjct: 506 ESMLEYNHAHKEFRRK 521


>SB_3889| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 250

 Score = 28.3 bits (60), Expect = 1.7
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = -2

Query: 224 LTTFSMMEPLPWLSYSKL*RTALS*SPVRMLLYSFSSRSWLEVSA 90
           +  F  ++PL  L+YS+  RTA+   P    ++ +  R+W E  A
Sbjct: 185 VVNFEPLKPLFMLAYSRS-RTAIPAGPALPNIFGYPHRNWKEAGA 228


>SB_42815| Best HMM Match : rve (HMM E-Value=0.00022)
          Length = 1514

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = +2

Query: 59   SPPARASLNYPRTLLTKTSRRNCTTASSPATTTVLSVRAWNMRAKAR 199
            +PP+R S    R+     SR    T S+P T +  S RA + R KA+
Sbjct: 1359 APPSRTSTPRSRSTPRSRSRSRTRTPSTPFTPSTTSSRA-SSRGKAK 1404


>SB_23517| Best HMM Match : WD40 (HMM E-Value=0)
          Length = 860

 Score = 27.5 bits (58), Expect = 2.9
 Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 6/38 (15%)
 Frame = +2

Query: 110 TSRRNCTTASSPATTTVLS------VRAWNMRAKARAP 205
           TSR NC   + P +T ++S      +R W+ R++++ P
Sbjct: 655 TSRVNCVKFNQPDSTVIISGSYDSTIRCWDCRSRSQEP 692


>SB_3171| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 851

 Score = 27.1 bits (57), Expect = 3.9
 Identities = 8/24 (33%), Positives = 18/24 (75%)
 Frame = +1

Query: 223 NNLIIDKRRNTWSTATSCGSATAQ 294
           NN++++K+R  W+ +   G++TA+
Sbjct: 813 NNVVVEKKRMRWTRSKEDGNSTAE 836


>SB_58599| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 616

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
 Frame = -1

Query: 306 CNNFLCR---CRPTACSSTPCVPSL 241
           C   LC+   C PT C  T CVP+L
Sbjct: 359 CVPTLCKHTICVPTLCEHTACVPTL 383



 Score = 25.8 bits (54), Expect = 9.0
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 285 CRPTACSSTPCVPSL 241
           C PT C  T CVP+L
Sbjct: 339 CLPTLCEHTVCVPTL 353



 Score = 25.8 bits (54), Expect = 9.0
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 285 CRPTACSSTPCVPSL 241
           C PT C  T CVP+L
Sbjct: 349 CVPTLCEHTACVPTL 363



 Score = 25.8 bits (54), Expect = 9.0
 Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 3/26 (11%)
 Frame = -1

Query: 309 LCNNFLCR---CRPTACSSTPCVPSL 241
           +C   LC    C PT C  T CVP+L
Sbjct: 368 ICVPTLCEHTACVPTLCKHTICVPTL 393


>SB_51512| Best HMM Match : Abhydro_lipase (HMM E-Value=9.8e-06)
          Length = 226

 Score = 26.2 bits (55), Expect = 6.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 258 EYCYKLWVGNGTGNCYKVLPIKL 326
           + C+ +W+GN  GN Y    +KL
Sbjct: 49  DQCFDVWLGNVRGNTYGKRHVKL 71


>SB_53067| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 668

 Score = 26.2 bits (55), Expect = 6.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 258 EYCYKLWVGNGTGNCYKVLPIKL 326
           + C+ +W+GN  GN Y    +KL
Sbjct: 372 DQCFDVWLGNVRGNTYGKRHVKL 394


>SB_20049| Best HMM Match : 7tm_1 (HMM E-Value=6.2e-05)
          Length = 1023

 Score = 26.2 bits (55), Expect = 6.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 225 QPDH*QETEHMEYCYKLWVGNG 290
           +P H   T  ++Y Y+LW G G
Sbjct: 753 RPRHPSSTSTVKYRYRLWTGKG 774


>SB_48991| Best HMM Match : Rad52_Rad22 (HMM E-Value=5.2e-12)
          Length = 353

 Score = 25.8 bits (54), Expect = 9.0
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 59  SPPARASLNYPRTLLTKTSRRNCTTASSPATTTV 160
           +P A  +    RT    +S RNCTT  + +TTTV
Sbjct: 124 APTASVTTEKSRTS-EDSSNRNCTTPINQSTTTV 156


>SB_41261| Best HMM Match : Metallothio_11 (HMM E-Value=0.74)
          Length = 328

 Score = 25.8 bits (54), Expect = 9.0
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -1

Query: 312 VLCNNFLCRCRPTACSSTPCVPSLV 238
           V C   +C C P  C+   C P +V
Sbjct: 228 VTCRCSVCTCCPCDCTCLQCAPCIV 252


>SB_8246| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 267

 Score = 25.8 bits (54), Expect = 9.0
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +1

Query: 10  KAPNKMKLLVVFAMCMLAASAGVVELSADTSN 105
           +AP K+   V  A CM  A+A  V  SADT+N
Sbjct: 44  QAP-KVLAAVSSASCMWTANAATVSPSADTAN 74


>SB_3503| Best HMM Match : Rad52_Rad22 (HMM E-Value=1e-24)
          Length = 398

 Score = 25.8 bits (54), Expect = 9.0
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 59  SPPARASLNYPRTLLTKTSRRNCTTASSPATTTV 160
           +P A  +    RT    +S RNCTT  + +TTTV
Sbjct: 169 APTASVTTEKSRTS-EDSSNRNCTTPINQSTTTV 201


>SB_50904| Best HMM Match : NACHT (HMM E-Value=2.3e-05)
          Length = 1122

 Score = 25.8 bits (54), Expect = 9.0
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +2

Query: 32  FSLYLRCACSPPARASLNYPRTLLTKTSRRNCTTASSPAT 151
           + L+ R    PP+  S  +  TLLT   R NC T + P T
Sbjct: 256 YQLFSRPPLLPPS--SEPFDITLLTILLRNNCPTLTEPVT 293


>SB_8486| Best HMM Match : Granulin (HMM E-Value=0)
          Length = 878

 Score = 25.8 bits (54), Expect = 9.0
 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
 Frame = -3

Query: 196 CLGSHIPSSDGQHCRSRR*G--CCCTV 122
           C GSH+   DG  C  +R G   CC +
Sbjct: 551 CEGSHLACPDGTTCCKKRSGGYACCPI 577


>SB_1049| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 411

 Score = 25.8 bits (54), Expect = 9.0
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 116 SRSWLEVSADSSTTPALAASM 54
           + SW+E  A+  T PAL AS+
Sbjct: 242 ANSWIESDANQPTKPALTASL 262


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,689,587
Number of Sequences: 59808
Number of extensions: 204783
Number of successful extensions: 659
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 658
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 485763447
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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