Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20045X
(339 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-P... 29 1.2
AY095514-1|AAM12248.1| 274|Drosophila melanogaster GH01508p pro... 28 3.6
AE014296-1050|AAF50713.1| 274|Drosophila melanogaster CG6483-PA... 28 3.6
X75886-1|CAA53480.1| 621|Drosophila melanogaster nuclear lamin ... 27 6.2
Z29361-1|CAA82545.1| 644|Drosophila melanogaster BTD protein. 27 8.2
AY752571-1|AAW32017.1| 262|Drosophila melanogaster Cyp9f2 protein. 27 8.2
AY089586-1|AAL90324.1| 434|Drosophila melanogaster RE12242p pro... 27 8.2
AY084183-1|AAL89921.1| 315|Drosophila melanogaster RE62247p pro... 27 8.2
AE014298-1363|AAF46518.1| 644|Drosophila melanogaster CG12653-P... 27 8.2
AE014134-1913|AAF52971.1| 434|Drosophila melanogaster CG6113-PA... 27 8.2
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ... 27 8.2
>AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-PA
protein.
Length = 3539
Score = 29.5 bits (63), Expect = 1.2
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +2
Query: 53 ACSPPARASLNYPRTLLTKTSRRNCTTASSPATTTVLS 166
+CSP + ++ T T+TS N T SS ATTTV S
Sbjct: 747 SCSPSSSSASTLLSTA-TRTSMSNSTCTSSAATTTVSS 783
>AY095514-1|AAM12248.1| 274|Drosophila melanogaster GH01508p
protein.
Length = 274
Score = 27.9 bits (59), Expect = 3.6
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 25 MKLLVVFAMCMLAASAGVVELSADTSNQDL 114
MK+LVVFA+ + ASAG++ +DL
Sbjct: 1 MKVLVVFALALATASAGLLPQQVPIHPRDL 30
>AE014296-1050|AAF50713.1| 274|Drosophila melanogaster CG6483-PA
protein.
Length = 274
Score = 27.9 bits (59), Expect = 3.6
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 25 MKLLVVFAMCMLAASAGVVELSADTSNQDL 114
MK+LVVFA+ + ASAG++ +DL
Sbjct: 1 MKVLVVFALALATASAGLLPQQVPIHPRDL 30
>X75886-1|CAA53480.1| 621|Drosophila melanogaster nuclear lamin C
protein protein.
Length = 621
Score = 27.1 bits (57), Expect = 6.2
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 82 ELSADTSNQDLEEKLYNSILTGDYDSAVRQSLEYESQGKGSIIEN 216
E + +N L E YN + G Y+ A+ ++E Q K +EN
Sbjct: 141 EATVAENNARLYENRYNEV-NGKYNQALADRKKFEDQAKELALEN 184
>Z29361-1|CAA82545.1| 644|Drosophila melanogaster BTD protein.
Length = 644
Score = 26.6 bits (56), Expect = 8.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 62 PPARASLNYPRTLLTKTSRRNCTTASSPATTTV 160
PP + L YP+ T T+ N + S+P++ +V
Sbjct: 123 PPMKLELPYPQASSTGTASPNSSIQSAPSSASV 155
>AY752571-1|AAW32017.1| 262|Drosophila melanogaster Cyp9f2 protein.
Length = 262
Score = 26.6 bits (56), Expect = 8.2
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +1
Query: 103 NQDLEEKLYNSILTGDYDSAVRQSLEYESQGKGSIIENVVNNLI 234
NQD++++LY + D D ++ L YE+ ++ VVN ++
Sbjct: 214 NQDVQQRLYEEVQQVDQDLEGKE-LTYEAIMXMKYLDQVVNEVL 256
>AY089586-1|AAL90324.1| 434|Drosophila melanogaster RE12242p
protein.
Length = 434
Score = 26.6 bits (56), Expect = 8.2
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 267 YKLWVGNGTGNCYKVLPIKL*THH 338
Y +W+ N GN Y +K THH
Sbjct: 139 YDVWMANVRGNTYSRKHVKYSTHH 162
>AY084183-1|AAL89921.1| 315|Drosophila melanogaster RE62247p
protein.
Length = 315
Score = 26.6 bits (56), Expect = 8.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 62 PPARASLNYPRTLLTKTSRRNCTTASSPATTTV 160
PP + L YP+ T T+ N + S+P++ +V
Sbjct: 123 PPMKLELPYPQASSTGTASPNSSIQSAPSSASV 155
>AE014298-1363|AAF46518.1| 644|Drosophila melanogaster CG12653-PA
protein.
Length = 644
Score = 26.6 bits (56), Expect = 8.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 62 PPARASLNYPRTLLTKTSRRNCTTASSPATTTV 160
PP + L YP+ T T+ N + S+P++ +V
Sbjct: 123 PPMKLELPYPQASSTGTASPNSSIQSAPSSASV 155
>AE014134-1913|AAF52971.1| 434|Drosophila melanogaster CG6113-PA
protein.
Length = 434
Score = 26.6 bits (56), Expect = 8.2
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 267 YKLWVGNGTGNCYKVLPIKL*THH 338
Y +W+ N GN Y +K THH
Sbjct: 139 YDVWMANVRGNTYSRKHVKYSTHH 162
>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
protein.
Length = 1286
Score = 26.6 bits (56), Expect = 8.2
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +2
Query: 50 CACSPPARASLNYPR-TLLTKTSRRNCTTASSPATTT 157
C CSP PR T T TSR TT S TTT
Sbjct: 551 CTCSPTTTT----PRSTTTTSTSRPTTTTPRSTTTTT 583
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,578,441
Number of Sequences: 53049
Number of extensions: 311698
Number of successful extensions: 1226
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1223
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 777358641
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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