Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20045X
         (339 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    25   0.25 
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   1.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   4.1  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    21   5.4  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   5.4  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    20   9.4  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    20   9.4  

>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 25.0 bits (52), Expect = 0.25
 Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
 Frame = +1

Query: 40  VFAMCMLAASAGVVELSADTSNQDLEEKLYNS----ILTGDYDSAVRQSLEYESQGKGSI 207
           +FA CM   ++  +++  D     + + L  S    I++ D+D +     EY +  +   
Sbjct: 37  LFARCMGGINSRNMDIEHDPGLAAVLQYLIRSGQLNIISSDHDDSDE---EYAANSQPPR 93

Query: 208 IENVVNNLIIDKRRNTWSTATSCG 279
           I +V N   +DK   + +T  +CG
Sbjct: 94  ITSVPNTSRLDKSEISLATKQACG 117


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -2

Query: 92  ADSSTTPALAASMHIANTTRSFILLGAFQI 3
           A+   +  +A  +HI+N T SF L G F++
Sbjct: 396 ANKMESSGMAGRVHISNATLSF-LNGEFEV 424


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 13/50 (26%)
 Frame = +1

Query: 70   AGVVELSADTSN-----------QDLEEKLYN-SILTGDY-DSAVRQSLE 180
            AG+ E SA TSN           +D+ E +Y+ S   G + D+ +R SLE
Sbjct: 1244 AGIAETSAGTSNSRGAAQMSKVPRDVSEGIYDGSGANGSFLDNLIRSSLE 1293


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -2

Query: 104 LEVSADSSTTPALAASMHIANTTRSFIL 21
           LE S   S +P      + +NT+++FIL
Sbjct: 80  LERSKTKSKSPESRDRSNTSNTSKTFIL 107


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = -1

Query: 135 AVVQFLLEVLVRSVRG*FNDARAGGEHAHRKYN 37
           A V+  ++V++  + G  NDA   G      YN
Sbjct: 107 AGVRIYVDVIMNHMSGDRNDAHGTGNSRANTYN 139


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 73  GVVELSADTSNQDLEEKLYNSILTGD 150
           G+VEL   T N+ + E L  ++  GD
Sbjct: 147 GIVELIMFTVNKYVGEHLLMTVDAGD 172


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 19.8 bits (39), Expect = 9.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 115 EEKLYNSILTGDYD 156
           + +LY  I TG YD
Sbjct: 117 QHRLYAQIKTGSYD 130


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,677
Number of Sequences: 438
Number of extensions: 2040
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7715466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)