Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20045X
(339 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g59210.2 68418.m07421 myosin heavy chain-related contains wea... 32 0.11
At5g59210.1 68418.m07420 myosin heavy chain-related contains wea... 32 0.11
At1g69390.1 68414.m07966 chloroplast division protein, putative ... 30 0.45
At2g33860.1 68415.m04157 auxin-responsive factor (ARF3) / ETTIN ... 28 1.8
At3g43890.1 68416.m04698 DC1 domain-containing protein contains ... 27 2.4
At4g13310.2 68417.m02080 cytochrome P450 71A20, putative (CYP71A... 27 3.2
At4g13310.1 68417.m02081 cytochrome P450 71A20, putative (CYP71A... 27 3.2
At2g15490.1 68415.m01772 UDP-glucoronosyl/UDP-glucosyl transfera... 27 3.2
At3g25590.1 68416.m03186 expressed protein 27 4.2
At5g10290.1 68418.m01194 leucine-rich repeat family protein / pr... 26 5.6
At4g02180.1 68417.m00290 DC1 domain-containing protein contains ... 26 5.6
At1g78570.1 68414.m09157 NAD-dependent epimerase/dehydratase fam... 26 5.6
At3g14790.1 68416.m01869 NAD-dependent epimerase/dehydratase fam... 26 7.4
At1g64530.1 68414.m07315 RWP-RK domain-containing protein simila... 26 7.4
At1g53500.1 68414.m06066 NAD-dependent epimerase/dehydratase fam... 26 7.4
At1g23770.1 68414.m02999 F-box family protein contains Pfam PF00... 26 7.4
At5g66720.2 68418.m08411 5-azacytidine resistance protein -relat... 25 9.7
At5g66720.1 68418.m08410 5-azacytidine resistance protein -relat... 25 9.7
At5g46130.1 68418.m05673 hypothetical protein contains Pfam prof... 25 9.7
At4g37690.1 68417.m05332 galactosyl transferase GMA12/MNN10 fami... 25 9.7
At4g17330.1 68417.m02600 agenet domain-containing protein contai... 25 9.7
At4g01930.1 68417.m00257 DC1 domain-containing protein contains ... 25 9.7
At1g67310.1 68414.m07661 calmodulin-binding protein similar to a... 25 9.7
>At5g59210.2 68418.m07421 myosin heavy chain-related contains weak
similarity to Myosin heavy chain, gizzard smooth muscle
(Swiss-Prot:P10587) [Gallus gallus]
Length = 433
Score = 31.9 bits (69), Expect = 0.11
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +1
Query: 82 ELSADTSNQDLE-EKLY--NSILTGDYDSAVRQSLEYESQGKGSIIENVVNNLIIDKRRN 252
+L + NQ E EKL+ NS L+ Y ++ S ++E+Q K + +NV ++DK R
Sbjct: 285 KLLMEIDNQSSEIEKLFEENSNLSASYQESINISNQWENQVKECLKQNVELREVLDKLRT 344
Query: 253 TWSTATSCG 279
+ + S G
Sbjct: 345 EQAGSFSRG 353
>At5g59210.1 68418.m07420 myosin heavy chain-related contains weak
similarity to Myosin heavy chain, gizzard smooth muscle
(Swiss-Prot:P10587) [Gallus gallus]
Length = 434
Score = 31.9 bits (69), Expect = 0.11
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +1
Query: 82 ELSADTSNQDLE-EKLY--NSILTGDYDSAVRQSLEYESQGKGSIIENVVNNLIIDKRRN 252
+L + NQ E EKL+ NS L+ Y ++ S ++E+Q K + +NV ++DK R
Sbjct: 286 KLLMEIDNQSSEIEKLFEENSNLSASYQESINISNQWENQVKECLKQNVELREVLDKLRT 345
Query: 253 TWSTATSCG 279
+ + S G
Sbjct: 346 EQAGSFSRG 354
>At1g69390.1 68414.m07966 chloroplast division protein, putative
(MinE1) identical to chloroplast division protein
homolog MinE1 GI:17511220 from [Arabidopsis thaliana]
Length = 229
Score = 29.9 bits (64), Expect = 0.45
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 55 MLAASAGVVELSADTSNQDLEEKLYNSILTGDYD 156
+LA + G ELS + Q++E LYN+I G +D
Sbjct: 70 VLARNTGDYELSPSPAEQEIESFLYNAINMGFFD 103
>At2g33860.1 68415.m04157 auxin-responsive factor (ARF3) / ETTIN
protein (ETT) identical to ETTIN GB:AF007788 from
[Arabidopsis thaliana]
Length = 608
Score = 27.9 bits (59), Expect = 1.8
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Frame = -1
Query: 300 NFLCRCRPTACSSTPCVPSLVNDQVVNYILDD--GXXXXXLIFQ-ALTDSTVVVAGEDAV 130
NF R P + SS+P L N N L+D G +F LTD T VA AV
Sbjct: 511 NFSTRILPPSVSSSPSSVLLTNSNSPNGRLEDHHGGSGRCRLFGFPLTDETTAVASATAV 570
>At3g43890.1 68416.m04698 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 661
Score = 27.5 bits (58), Expect = 2.4
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
Frame = +2
Query: 29 NFSLYLRCACSPPAR--ASLN---YPRTLLTKTSRRNCTT 133
NFSL L+C PP + LN +P TL+ K+ CTT
Sbjct: 228 NFSLDLQCVFHPPKQNPHDLNIHDHPLTLMPKSISFTCTT 267
>At4g13310.2 68417.m02080 cytochrome P450 71A20, putative (CYP71A20)
Identical to Cytochrome P450 (SP:Q9T0K2) [Arabidopsis
thaliana]; similar to cytochrome P450 71A4, Solanum
melongena, PIR2:S36805
Length = 390
Score = 27.1 bits (57), Expect = 3.2
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 121 KLYNSILTGDYDSAVRQSLEYESQGKGSIIENVVNNLII 237
K+ + IL+G D A EY Q K I+N++NN ++
Sbjct: 103 KVVDKILSGGRDVAFAPYGEYWRQMKSICIQNLLNNKMV 141
>At4g13310.1 68417.m02081 cytochrome P450 71A20, putative (CYP71A20)
Identical to Cytochrome P450 (SP:Q9T0K2) [Arabidopsis
thaliana]; similar to cytochrome P450 71A4, Solanum
melongena, PIR2:S36805
Length = 497
Score = 27.1 bits (57), Expect = 3.2
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 121 KLYNSILTGDYDSAVRQSLEYESQGKGSIIENVVNNLII 237
K+ + IL+G D A EY Q K I+N++NN ++
Sbjct: 103 KVVDKILSGGRDVAFAPYGEYWRQMKSICIQNLLNNKMV 141
>At2g15490.1 68415.m01772 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 484
Score = 27.1 bits (57), Expect = 3.2
Identities = 15/64 (23%), Positives = 28/64 (43%)
Frame = +1
Query: 130 NSILTGDYDSAVRQSLEYESQGKGSIIENVVNNLIIDKRRNTWSTATSCGSATAQEIVTK 309
N + TG+ + + + E ++GKG II ++I + T CG + E +
Sbjct: 326 NQVGTGENEDWLPKGFEERNKGKGLIIRGWAPQVLILDHKAIGGFVTHCGWNSTLEGIAA 385
Query: 310 YFPL 321
P+
Sbjct: 386 GLPM 389
>At3g25590.1 68416.m03186 expressed protein
Length = 423
Score = 26.6 bits (56), Expect = 4.2
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -1
Query: 303 NNFLCRCRPTACSSTPCVPSLVNDQVVNYILDD 205
+ F CR P+ S P +ND++VN + +
Sbjct: 25 SEFTCRKHPSVSSGVGICPYCLNDRLVNLVCSE 57
>At5g10290.1 68418.m01194 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 613
Score = 26.2 bits (55), Expect = 5.6
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +1
Query: 121 KLYNSILTGDYDSAVRQSLEYESQGKGSIIENVVNNLIIDKRRNTWSTATSCGSATAQEI 300
K+Y +L + AV++ ++ES G + + V + + RN C + T + +
Sbjct: 303 KVYKGVLPDNTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTQTERLL 362
Query: 301 V 303
V
Sbjct: 363 V 363
>At4g02180.1 68417.m00290 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 989
Score = 26.2 bits (55), Expect = 5.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 29 NFSLYLRCACSPPARASLN 85
NF+L LRC +PP ++ LN
Sbjct: 252 NFTLDLRCVLNPPQQSLLN 270
Score = 26.2 bits (55), Expect = 5.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 29 NFSLYLRCACSPPARASLN 85
NF+L LRC +PP ++ LN
Sbjct: 556 NFTLDLRCVLNPPPQSLLN 574
>At1g78570.1 68414.m09157 NAD-dependent epimerase/dehydratase family
protein similar to dTDP-glucose 4,6-dehydratase from
Aneurinibacillus thermoaerophilus GI:16357461, RmlB from
Leptospira borgpetersenii GI:4234803; contains Pfam
profile PF01370 NAD dependent epimerase/dehydratase
family
Length = 669
Score = 26.2 bits (55), Expect = 5.6
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 65 PARASLNYPRTLLTKTSRRNCTTASSPATTTVL 163
P + LN PR +TK SR N + P + TVL
Sbjct: 541 PISSDLNNPRNFITKISRYN-KVVNIPNSMTVL 572
>At3g14790.1 68416.m01869 NAD-dependent epimerase/dehydratase family
protein similar to dTDP-glucose 4,6-dehydratase from
Aneurinibacillus thermoaerophilus GI:16357461,
Saccharopolyspora spinosa GI:15077647, RmlB from
Leptospira borgpetersenii GI:4234803; contains Pfam
profile PF01370 NAD dependent epimerase/dehydratase
family
Length = 664
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 65 PARASLNYPRTLLTKTSRRNCTTASSPATTTVL 163
P + LN PR +TK SR N + P + T+L
Sbjct: 536 PISSDLNNPRNFITKISRYN-KVVNIPNSMTIL 567
>At1g64530.1 68414.m07315 RWP-RK domain-containing protein similar
to nodule inception protein [Lotus japonicus]
GI:6448579; contains Pfam profile: PF02042 RWP-RK domain
Length = 841
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -2
Query: 134 LLYSFSSRSWLEVSADSSTTPALAASMHIANTTR 33
L Y R W+ VS D+ + L S ANT R
Sbjct: 784 LKYLDDDREWVSVSCDADLSECLDTSAAKANTLR 817
>At1g53500.1 68414.m06066 NAD-dependent epimerase/dehydratase family
protein low similarity to dTDP-D-glucose-4,6-dehydratase
from Aneurinibacillus thermoaerophilus GI:16357461,
Sphingomonas sp. GI:1314581; contains Pfam profile
PF01370: NAD dependent epimerase/dehydratase family;
putative NDP-rhamnose synthase (rhm2 gene) GI:31559258
Length = 667
Score = 25.8 bits (54), Expect = 7.4
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 65 PARASLNYPRTLLTKTSRRNCTTASSPATTTVL 163
P + LN PR +TK SR N P + TVL
Sbjct: 539 PISSDLNNPRNFITKISRYN-KVVDIPNSMTVL 570
>At1g23770.1 68414.m02999 F-box family protein contains Pfam
PF00646: F-box domain; similar to F-box only protein 7
(SP:Q9Y3I1) {Homo sapiens} ; similar to SKP1 interacting
partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 350
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 104 LEVSADSSTTPALAASMHIANTTRSFILL 18
LE S D+S ALA S+H F+LL
Sbjct: 54 LEKSGDTSDLTALALSVHAVMLESGFVLL 82
>At5g66720.2 68418.m08411 5-azacytidine resistance protein -related
contains weak similarity to 5-azacytidine resistance
protein azr1 (Swiss-Prot:Q09189) [Schizosaccharomyces
pombe]
Length = 411
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 118 EKLYNSILTGDYDSAVRQSLEYESQGKGSIIENVVNNLIIDKRRNT 255
+ LYN +TG S+VR L + +G I + +DK+R +
Sbjct: 337 DNLYNEEITGVVVSSVRAGL--DPKGTAQKIAELARQRAVDKKRQS 380
>At5g66720.1 68418.m08410 5-azacytidine resistance protein -related
contains weak similarity to 5-azacytidine resistance
protein azr1 (Swiss-Prot:Q09189) [Schizosaccharomyces
pombe]
Length = 414
Score = 25.4 bits (53), Expect = 9.7
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 118 EKLYNSILTGDYDSAVRQSLEYESQGKGSIIENVVNNLIIDKRRNT 255
+ LYN +TG S+VR L + +G I + +DK+R +
Sbjct: 340 DNLYNEEITGVVVSSVRAGL--DPKGTAQKIAELARQRAVDKKRQS 383
>At5g46130.1 68418.m05673 hypothetical protein contains Pfam profile
PF03478: Protein of unknown function (DUF295)
Length = 376
Score = 25.4 bits (53), Expect = 9.7
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +1
Query: 46 AMCMLAASAGV-VELSADTSNQDLEEKLYNSILTGDYDSAVRQSLEYESQGKGSIIENVV 222
AM M +GV + + +TS +D++ N + S+ KGS I+N+
Sbjct: 80 AMSMGLNQSGVNIHMKENTSLRDMDNVRLNIYYKPSDPKSKSVSVHLPPLPKGSQIQNIA 139
Query: 223 NNLIIDKRRNTWSTA 267
+ D + + W A
Sbjct: 140 MTSLPDLKNDDWVVA 154
>At4g37690.1 68417.m05332 galactosyl transferase GMA12/MNN10 family
protein low similarity to
alpha-1,2-galactosyltransferase, Schizosaccharomyces
pombe [SP|Q09174]
Length = 432
Score = 25.4 bits (53), Expect = 9.7
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -3
Query: 199 PCLGSHIPSSDGQHC 155
PC G H PS DG C
Sbjct: 374 PCSGDHNPSYDGDTC 388
>At4g17330.1 68417.m02600 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 1058
Score = 25.4 bits (53), Expect = 9.7
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 122 NCTTASSPATTTVLSVRAWNMR 187
N T PA L+++AWN+R
Sbjct: 713 NTVTVHFPAEEETLTIKAWNLR 734
>At4g01930.1 68417.m00257 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 652
Score = 25.4 bits (53), Expect = 9.7
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2
Query: 29 NFSLYLRCACSPPARASLN 85
NF+L +RC +PP ++ LN
Sbjct: 219 NFTLDMRCVLNPPQQSLLN 237
>At1g67310.1 68414.m07661 calmodulin-binding protein similar to
anther ethylene-upregulated calmodulin-binding protein
ER1 GI:11612392 from[Nicotiana tabacum]
Length = 1035
Score = 25.4 bits (53), Expect = 9.7
Identities = 22/88 (25%), Positives = 42/88 (47%)
Frame = +1
Query: 13 APNKMKLLVVFAMCMLAASAGVVELSADTSNQDLEEKLYNSILTGDYDSAVRQSLEYESQ 192
+PN++ LLV F +L+ + + + ++ N L KL D V ++ S
Sbjct: 571 SPNELILLVRFVQTLLSDRSSERKSNLESGNDKLLTKLK---ADDDQWRHVIGTIIDGSA 627
Query: 193 GKGSIIENVVNNLIIDKRRNTWSTATSC 276
S ++ ++ L+ DK +TW ++ SC
Sbjct: 628 SSTSTVDWLLQELLKDK-LDTWLSSRSC 654
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,270,072
Number of Sequences: 28952
Number of extensions: 136385
Number of successful extensions: 420
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 420
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 399440640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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