Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20044
(595 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10683| Best HMM Match : Stathmin (HMM E-Value=0.0011) 36 0.019
SB_14299| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.17
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_42034| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_12374| Best HMM Match : SlyX (HMM E-Value=1.2) 29 2.1
SB_46938| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_32051| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15) 29 3.7
SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098) 28 4.9
SB_44118| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 28 4.9
SB_56390| Best HMM Match : CHASE3 (HMM E-Value=0.042) 28 6.5
SB_37659| Best HMM Match : Motilin_ghrelin (HMM E-Value=3.2) 28 6.5
SB_21209| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_7677| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_18775| Best HMM Match : DUF1409 (HMM E-Value=0.78) 27 8.6
SB_58439| Best HMM Match : L15 (HMM E-Value=1e-05) 27 8.6
SB_50620| Best HMM Match : Lectin_C (HMM E-Value=2.1e-14) 27 8.6
SB_45490| Best HMM Match : zf-U1 (HMM E-Value=0.51) 27 8.6
SB_21190| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
>SB_10683| Best HMM Match : Stathmin (HMM E-Value=0.0011)
Length = 299
Score = 36.3 bits (80), Expect = 0.019
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +2
Query: 314 IRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQ 478
I EQ +E + KME +EKR++Y+ L++RL + VE+ R T+E+
Sbjct: 189 IAQEQIEQQSKLIEEKIMQKMEMTKEKRDSYMEALKTRLHEKSLDVEQKRQTMEE 243
>SB_14299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 347 ATKEALDAKMETHEEKREAYINELRSRLKDHLEG-VEKTRLTLEQQTAEVYKAIEI 511
A ++AL+A +E R+ + ELR ++ + E +E+ R+ E+Q AE+ EI
Sbjct: 52 AIRDALNAAEAKAQEDRKQALEELRKKMNEEREQCLEQARIRAEEQMAEIRYRCEI 107
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 483 PRKCTRPSK*DDHSCRQAXREPQEDDRASARNMR 584
PRK R + DD + R+ R+P+ DDR ++ R
Sbjct: 282 PRKVDREPRRDDRATRKDDRQPRGDDRGQMKDDR 315
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +3
Query: 474 NSRPRKCTRPSK*DDHSCRQAXREPQEDDRASARNMR 584
+S+ RK + + DD R+ REP+ DDRA+ ++ R
Sbjct: 321 DSKLRKDNKGPRKDDREPRRDDREPRRDDRATRKDDR 357
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +3
Query: 471 WNSRPRKCTRPSK*DDHSCRQAXREPQEDDRASARNMR 584
W+ R R R K D R+ REP+ DDRA+ ++ R
Sbjct: 265 WD-RQRFGERTEKHQDREPRKVDREPRRDDRATRKDDR 301
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 483 PRKCTRPSK*DDHSCRQAXREPQEDDRASARNMR 584
PR+ R + DD + R+ R+P+ DDR ++ R
Sbjct: 338 PRRDDREPRRDDRATRKDDRQPRGDDRGQMKDDR 371
>SB_42034| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 504
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 66 EVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKT--PSVEEIQEKLKAXEE 239
E E TE + ++ G + + LA +GV P ADS E+ P +EK E
Sbjct: 285 EEENSETEEQPRKPVGGPINFAAELASKIGVAPPPAADSDEEAAEPGAWSDEEKKPQQPE 344
Query: 240 RRRS 251
++RS
Sbjct: 345 KQRS 348
>SB_12374| Best HMM Match : SlyX (HMM E-Value=1.2)
Length = 157
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +3
Query: 51 KVEAMEVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQEKLKA 230
++E + KSTE+R QE YE +E + +T +E ++EK +
Sbjct: 46 ELEPLAEMLKSTELRLQEAQDRLFTYERRASEHTKLIAELTQKVESQTDQLEHMREKYRL 105
Query: 231 XEERRRSLK 257
++ RSL+
Sbjct: 106 TQDEYRSLQ 114
>SB_46938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 143
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +3
Query: 51 KVEAMEVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQEKLKA 230
++E + KSTE+R QE YE +E + +T +E ++EK +
Sbjct: 67 ELEPLAEMLKSTELRLQEAQDRLFTYERRASEHTKLIAELTQKVESQTDQLEHMREKYRL 126
Query: 231 XEERRRSLK 257
++ RSL+
Sbjct: 127 TQDEYRSLQ 135
>SB_32051| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1090
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 66 EVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKT--PSVEEIQEKLKAXEE 239
E E TE + ++ G + + LA +GV P ADS E+ P +EK E
Sbjct: 149 EEENSETEEQPRKPVGGPINFAAELASKIGVAPPPAADSDEEAAEPGAWSDEEKKPQQPE 208
Query: 240 RRRS 251
++RS
Sbjct: 209 KQRS 212
>SB_12752| Best HMM Match : Borrelia_orfA (HMM E-Value=0.15)
Length = 1774
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +2
Query: 353 KEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTA 487
K+ D+ E H+E ++ + E K H+E ++ T + +EQQ A
Sbjct: 1422 KKVQDSSNEIHKENQD--LREELKMAKRHIESLKSTLIQVEQQAA 1464
>SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098)
Length = 1177
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +2
Query: 347 ATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIE 508
+ KE +M T +EK + + ++L+D L K++ Q+ +E Y+A++
Sbjct: 423 SNKEKEYKRMATEQEKESKSLRKKNNQLEDELTNQGKSKEQEAQEHSEKYEALK 476
>SB_44118| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 611
Score = 28.3 bits (60), Expect = 4.9
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -3
Query: 305 PPRSWPSSEQWRPSY 261
PP ++PSS+QW P+Y
Sbjct: 508 PPGAYPSSDQWIPAY 522
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +2
Query: 308 SRIRSEQTNNFIVATK-EALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQT 484
SR+ SE + I K + +A +E ++K + INE R +L++ ++ ++ +
Sbjct: 1455 SRLNSELEDALIDLEKAQTNNANLEKKQKKIDIQINEWRVKLEEVQADLDNSQKEARNYS 1514
Query: 485 AEVYK 499
E+YK
Sbjct: 1515 TEMYK 1519
>SB_56390| Best HMM Match : CHASE3 (HMM E-Value=0.042)
Length = 440
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/45 (26%), Positives = 25/45 (55%)
Frame = +2
Query: 359 ALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEV 493
AL K + + +N+ +L + +EG++ T +TL+QQ ++
Sbjct: 235 ALQKKYSDELKSSQDELNDFVIQLDEEVEGMQSTIMTLQQQIKDI 279
>SB_37659| Best HMM Match : Motilin_ghrelin (HMM E-Value=3.2)
Length = 468
Score = 27.9 bits (59), Expect = 6.5
Identities = 20/61 (32%), Positives = 25/61 (40%)
Frame = +3
Query: 75 TKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQEKLKAXEERRRSL 254
T T R QE G +A P V V +ADS P +E+ +A E SL
Sbjct: 237 TSETTERDQEHDTGDIALPQYKGAPPLVVVAEQADSVASAPETLAAREEGEAVVESNSSL 296
Query: 255 K 257
K
Sbjct: 297 K 297
>SB_21209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 390
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 189 KTPSVEEIQEKLKAXEERRR 248
K P + E+QEKLKA +E RR
Sbjct: 281 KDPKLLELQEKLKAKKEERR 300
>SB_7677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 27.9 bits (59), Expect = 6.5
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +2
Query: 326 QTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEK--TRLTLEQQTAEVYK 499
QT I+ E ME + + E EL +L+ K T+L L Q+TAE YK
Sbjct: 401 QTQILILQVHEDYRKLMEQKQAEEERCRKELEEKLQTLERDSHKYRTKLELAQKTAETYK 460
>SB_18775| Best HMM Match : DUF1409 (HMM E-Value=0.78)
Length = 356
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/67 (25%), Positives = 35/67 (52%)
Frame = +3
Query: 48 LKVEAMEVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQEKLK 227
+ +E +++ K+ I ++K ++++ + +P AD K P EEI EKLK
Sbjct: 162 ITMEQSQIQLKTINIPLDGINKSPA--QLMIGRRLKTSLPATADLL-KPPGQEEITEKLK 218
Query: 228 AXEERRR 248
+E+++
Sbjct: 219 KIKEKQK 225
>SB_58439| Best HMM Match : L15 (HMM E-Value=1e-05)
Length = 203
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 69 VETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEK 191
+E + +I C +K GL + + G P+PRRA P K
Sbjct: 127 IERQGGKITCAHYNKLGLRVLLKPEKFEGKPIPRRAHPPSK 167
>SB_50620| Best HMM Match : Lectin_C (HMM E-Value=2.1e-14)
Length = 620
Score = 27.5 bits (58), Expect = 8.6
Identities = 11/29 (37%), Positives = 21/29 (72%), Gaps = 2/29 (6%)
Frame = +3
Query: 78 KSTEIRCQEMSKGGLAYEVI--LAEPVGV 158
K+TE++CQ +++GG+A + + E +GV
Sbjct: 202 KNTELQCQSINRGGVAKASVMYIVEDIGV 230
>SB_45490| Best HMM Match : zf-U1 (HMM E-Value=0.51)
Length = 477
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +3
Query: 87 EIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQEKLKAXEERRRSLK 257
E+ E+ K A A P AD P + S E EK+ A ++ R+LK
Sbjct: 328 EVESVEVKKEEDATAQASATPATTEAKEEADKPAEAASENEGSEKMDAKQQPPRALK 384
>SB_21190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 687
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +3
Query: 87 EIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQEKLKAXEERRRSLK 257
E+ E+ K A A P AD P + S E EK+ A ++ R+LK
Sbjct: 328 EVESVEVKKEEDATAQASATPATTEAKEEADKPAEAASENEGSEKMDAKQQPPRALK 384
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,837,981
Number of Sequences: 59808
Number of extensions: 246978
Number of successful extensions: 1058
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1055
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1427401750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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