Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20044
(595 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical p... 32 0.35
Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical p... 32 0.35
U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromos... 32 0.35
AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical ... 32 0.35
U41009-1|AAA82278.3| 501|Caenorhabditis elegans Hypothetical pr... 29 1.9
AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical ... 29 1.9
AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical ... 29 2.5
U32275-1|AAA75370.1| 982|Caenorhabditis elegans serine-threonin... 29 3.3
U11280-5|AAA19437.1| 982|Caenorhabditis elegans Protein kinase ... 29 3.3
Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 28 5.8
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 28 5.8
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 28 5.8
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 28 5.8
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 28 5.8
AL132877-17|CAB60849.2| 269|Caenorhabditis elegans Hypothetical... 28 5.8
U29082-4|AAT92084.1| 279|Caenorhabditis elegans Troponin t prot... 27 7.6
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 27 7.6
U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t prot... 27 7.6
>Z46935-10|CAA87054.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 31.9 bits (69), Expect = 0.35
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +2
Query: 323 EQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQT 484
EQ N + +E LDAK + HE+ + A +++S+ D V K R LE T
Sbjct: 331 EQINKSLSKDREVLDAKRKEHEDSKAANSKDIQSQSDDEAL-VTKYRNDLESLT 383
>Z46794-13|CAA86786.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 31.9 bits (69), Expect = 0.35
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +2
Query: 323 EQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQT 484
EQ N + +E LDAK + HE+ + A +++S+ D V K R LE T
Sbjct: 331 EQINKSLSKDREVLDAKRKEHEDSKAANSKDIQSQSDDEAL-VTKYRNDLESLT 383
>U96387-1|AAC47834.1| 1244|Caenorhabditis elegans mitotic chromosome
and X-chromosomeassociated MIX-1 protein protein.
Length = 1244
Score = 31.9 bits (69), Expect = 0.35
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +2
Query: 323 EQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQT 484
EQ N + +E LDAK + HE+ + A +++S+ D V K R LE T
Sbjct: 331 EQINKSLSKDREVLDAKRKEHEDSKAANSKDIQSQSDDEAL-VTKYRNDLESLT 383
>AL031266-2|CAA20330.1| 1244|Caenorhabditis elegans Hypothetical
protein M106.1 protein.
Length = 1244
Score = 31.9 bits (69), Expect = 0.35
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +2
Query: 323 EQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQT 484
EQ N + +E LDAK + HE+ + A +++S+ D V K R LE T
Sbjct: 331 EQINKSLSKDREVLDAKRKEHEDSKAANSKDIQSQSDDEAL-VTKYRNDLESLT 383
>U41009-1|AAA82278.3| 501|Caenorhabditis elegans Hypothetical
protein C06E7.2 protein.
Length = 501
Score = 29.5 bits (63), Expect = 1.9
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +2
Query: 320 SEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEV 493
SE +++ + +D + EEK E +NE+ LK E V+ + E +T EV
Sbjct: 392 SEINEKILISNEIPVDEISKEEEEKAEKELNEIIKELKSDEEAVDGEKDVGELKTREV 449
>AL132895-3|CAC14400.1| 676|Caenorhabditis elegans Hypothetical
protein Y59A8A.3 protein.
Length = 676
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 377 ETHEEKR--EAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEIR 514
E HE K+ E +NEL R K HL+ +E+ R EQ + E K E++
Sbjct: 422 EFHEYKKQQEVIVNELNHREKAHLDTIEQLR---EQISIEKSKLAELQ 466
>AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical
protein M151.4 protein.
Length = 591
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Frame = +2
Query: 371 KMETHEEK-REAYINELRS---RLKDHLEGVEKTRLTLEQQTAEV 493
K++T ++K E Y+N++R LKD+ EG+EK ++ + E+
Sbjct: 204 KLQTDKDKLEEEYMNDMRDLKKALKDNQEGLEKIAKDVKNKEGEI 248
>U32275-1|AAA75370.1| 982|Caenorhabditis elegans serine-threonine
kinase protein.
Length = 982
Score = 28.7 bits (61), Expect = 3.3
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +2
Query: 371 KMETHEEKREAYINE-LRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEIR 514
K+E+ +E + ++E L L++ + +KTR TLE+Q + A+E R
Sbjct: 862 KLESWQEDEQRVLSEKLEKELEELIAYQKKTRATLEEQIKKERTALEER 910
>U11280-5|AAA19437.1| 982|Caenorhabditis elegans Protein kinase
protein 18, isoforma protein.
Length = 982
Score = 28.7 bits (61), Expect = 3.3
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +2
Query: 371 KMETHEEKREAYINE-LRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEIR 514
K+E+ +E + ++E L L++ + +KTR TLE+Q + A+E R
Sbjct: 862 KLESWQEDEQRVLSEKLEKELEELIAYQKKTRATLEEQIKKERTALEER 910
>Z46812-5|CAA86847.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 28.3 bits (60), Expect = 4.4
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +2
Query: 323 EQTNNFIVATKEALDAKMETHEEKREAYINE---LRSRLKDHLEGVEKTRLTLEQQTAEV 493
E T + EALDA+ + H+ R A E L D E EK+++TL + +
Sbjct: 87 ETTEHLKDRVVEALDARRKEHDTVRNALKVEWTKATKSLHDCEESYEKSKITLRMREEAL 146
Query: 494 YKAIE 508
KA E
Sbjct: 147 KKARE 151
>Z37093-7|CAA85468.2| 775|Caenorhabditis elegans Hypothetical
protein ZK669.1a protein.
Length = 775
Score = 28.3 bits (60), Expect = 4.4
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +2
Query: 323 EQTNNFIVATKEALDAKMETHEEKREAYINE---LRSRLKDHLEGVEKTRLTLEQQTAEV 493
E T + EALDA+ + H+ R A E L D E EK+++TL + +
Sbjct: 87 ETTEHLKDRVVEALDARRKEHDTVRNALKVEWTKATKSLHDCEESYEKSKITLRMREEAL 146
Query: 494 YKAIE 508
KA E
Sbjct: 147 KKARE 151
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +2
Query: 371 KMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIE 508
K + H+E+ +NE +D + +EK R LEQQ E+ + I+
Sbjct: 1007 KEKKHQEESNRKLNEDLQSEEDKVNHLEKIRNKLEQQMDELEENID 1052
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +2
Query: 371 KMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIE 508
K + H+E+ +NE +D + +EK R LEQQ E+ + I+
Sbjct: 1007 KEKKHQEESNRKLNEDLQSEEDKVNHLEKIRNKLEQQMDELEENID 1052
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 27.9 bits (59), Expect = 5.8
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +3
Query: 123 AYEVILAEPVGVPVPR---RADSPEKTPSVEEIQEKLKAXEERRRSLKL 260
++E +L E V V + + + P+K + E +E K EERR + KL
Sbjct: 32 SFEEVLPEGVEVETKKGMKKKNKPKKVENTERPEEDAKCVEERRLAKKL 80
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 472 GTADRGSVQGHRNKMTTAADKRXENLKKMIER 567
G+ R S GHRN ++ +++R K +ER
Sbjct: 1481 GSKHRDSYHGHRNGSSSVSERRMREFKHELER 1512
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 472 GTADRGSVQGHRNKMTTAADKRXENLKKMIER 567
G+ R S GHRN ++ +++R K +ER
Sbjct: 1495 GSKHRDSYHGHRNGSSSVSERRMREFKHELER 1526
>AL132877-17|CAB60849.2| 269|Caenorhabditis elegans Hypothetical
protein Y105E8B.7 protein.
Length = 269
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 153 GVPVPRRADSPEKTPSVEEIQEKLKAXEERRRSL 254
GVP+P+ EK +E +EK+K+ EE R L
Sbjct: 179 GVPIPKIDIEIEKASPKKEKKEKVKSPEELTRRL 212
>U29082-4|AAT92084.1| 279|Caenorhabditis elegans Troponin t protein
3, isoform c protein.
Length = 279
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 353 KEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEV 493
+E AK++ +EE+R + LK E EK +L EQ+ E+
Sbjct: 65 EEEQHAKLQDYEERRRTEREKEEEELKKLKEKQEKRKLEREQEEKEM 111
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 353 KEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEV 493
+E AK++ +EE+R + LK E EK +L EQ+ E+
Sbjct: 899 EEEQHAKLQDYEERRRTEREKEEEELKKLKEKQEKRKLEREQEEKEM 945
>U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t protein
3, isoform a protein.
Length = 350
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 353 KEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEV 493
+E AK++ +EE+R + LK E EK +L EQ+ E+
Sbjct: 65 EEEQHAKLQDYEERRRTEREKEEEELKKLKEKQEKRKLEREQEEKEM 111
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,922,258
Number of Sequences: 27780
Number of extensions: 169469
Number of successful extensions: 905
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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