Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20042
         (613 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    25   2.5  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    24   4.4  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    24   4.4  
AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.           23   5.9  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   5.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   5.9  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 602 PPLCTRCDIRSCRLSRVKK 546
           P  CT CD  S  LS++K+
Sbjct: 211 PHKCTECDYASVELSKLKR 229


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -2

Query: 309 WRIYWTRRGRTLPHSTPSRRDVATCSNLELFKS 211
           WR    RR  TLP   PS  ++    + + F +
Sbjct: 231 WRFAGLRRNMTLPKRKPSNLEIRRQLSFQYFST 263


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 2   FIEKILMCWLVILGLSSDLVQLRAYFFVIIP 94
           F+ KI +   V L LSS  V L  ++F+I P
Sbjct: 298 FVIKISLFRTVFLRLSSLAVLLSRFYFLITP 328



 Score = 23.0 bits (47), Expect = 7.8
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -2

Query: 105 VLLLGMITKKYALN*TKSEDRPNITSQHIKIFS 7
           +LLL  IT     N + +E  PN T  H   FS
Sbjct: 158 ILLLAAITIYVLFNVSLAELEPNFTPSHPVSFS 190


>AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.
          Length = 194

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 267 SAARSFLAVSNRCAMPFCC 323
           ++ R+ LA SN C++  CC
Sbjct: 44  NSVRTALAASNCCSIVLCC 62


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +1

Query: 16   FNVLARDIGSIFRFGSIKSIFF 81
            ++VL  +IG I + GSI+++ F
Sbjct: 1490 YDVLGNEIGRINKLGSIENLSF 1511


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +1

Query: 16   FNVLARDIGSIFRFGSIKSIFF 81
            ++VL  +IG I + GSI+++ F
Sbjct: 1491 YDVLGNEIGRINKLGSIENLSF 1512


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,440
Number of Sequences: 2352
Number of extensions: 11159
Number of successful extensions: 34
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)