Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20040
(660 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 24 1.3
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 24 1.3
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 24 1.3
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 23 2.9
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 22 3.9
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 22 3.9
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 22 3.9
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 22 3.9
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 22 3.9
AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant transcrip... 22 3.9
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 5.1
DQ493452-1|ABF48588.1| 305|Tribolium castaneum hedgehog protein. 22 5.1
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 5.1
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 5.1
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 5.1
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 5.1
DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc gr... 21 6.8
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 23.8 bits (49), Expect = 1.3
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -3
Query: 379 RHHIRVINRHAHYFSNSIRFQ 317
RHH V + H H+F + ++Q
Sbjct: 117 RHHEEVADGHQHHFLHENKYQ 137
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 23.8 bits (49), Expect = 1.3
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -3
Query: 379 RHHIRVINRHAHYFSNSIRFQ 317
RHH V + H H+F + ++Q
Sbjct: 117 RHHEEVADGHQHHFLHENKYQ 137
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 23.8 bits (49), Expect = 1.3
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -3
Query: 379 RHHIRVINRHAHYFSNSIRFQ 317
RHH V + H H+F + ++Q
Sbjct: 117 RHHEEVADGHQHHFLHENKYQ 137
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 22.6 bits (46), Expect = 2.9
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = +2
Query: 242 ICGAGAFTPGCSKTHLPGYVQNADKLKSDGVAEIVCVSVNDP 367
+C G+ G G N +K SDG E C NDP
Sbjct: 116 LCPDGSLACGDGNCIERGLFCNGEKDCSDGSDENTCDIDNDP 157
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -1
Query: 315 LSAFCTYPGKCVLEHPGVKAPAPQIIQPSFPPS 217
+S+F PG + + + + ++ P FPPS
Sbjct: 2 MSSFLMNPGTALPTYQQPQHISGVVVDPKFPPS 34
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -1
Query: 315 LSAFCTYPGKCVLEHPGVKAPAPQIIQPSFPPS 217
+S+F PG + + + + ++ P FPPS
Sbjct: 2 MSSFLMNPGTALPTYQQPQHISGVVVDPKFPPS 34
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2
Query: 236 CIICGAGAFTPGCSKTHL 289
C ICG T G KTH+
Sbjct: 165 CKICGRAFTTKGNLKTHM 182
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 236 CIICGAGAFTPGCSKTHL 289
C ICG P KTHL
Sbjct: 252 CRICGKSYARPSTLKTHL 269
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -1
Query: 315 LSAFCTYPGKCVLEHPGVKAPAPQIIQPSFPPS 217
+S+F PG + + + + ++ P FPPS
Sbjct: 2 MSSFLMNPGTALPTYQQPQHISGVVVDPKFPPS 34
>AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant
transcription factor TcDfd1 protein.
Length = 126
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = -1
Query: 315 LSAFCTYPGKCVLEHPGVKAPAPQIIQPSFPPS 217
+S+F PG + + + + ++ P FPPS
Sbjct: 2 MSSFLMNPGTALPTYQQPQHISGVVVDPKFPPS 34
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.8 bits (44), Expect = 5.1
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 383 KPPSHTGH*QTRT 345
+PPS T H QT+T
Sbjct: 1175 RPPSTTNHWQTKT 1187
>DQ493452-1|ABF48588.1| 305|Tribolium castaneum hedgehog protein.
Length = 305
Score = 21.8 bits (44), Expect = 5.1
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -2
Query: 239 YNLLSRRQLTNIHLISGRIFE*ISSRQLIPD 147
YN +RQ +I L SGR S L+ D
Sbjct: 157 YNPSQKRQFLHITLASGRTLTVTPSHLLVLD 187
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.1
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 147 VGDQLPAADLFEDSPANK 200
V +PA D+FE+ NK
Sbjct: 1510 VASSIPAKDVFENGHVNK 1527
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.1
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 147 VGDQLPAADLFEDSPANK 200
V +PA D+FE+ NK
Sbjct: 1510 VASSIPAKDVFENGHVNK 1527
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.1
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 147 VGDQLPAADLFEDSPANK 200
V +PA D+FE+ NK
Sbjct: 1510 VASSIPAKDVFENGHVNK 1527
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 21.8 bits (44), Expect = 5.1
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 147 VGDQLPAADLFEDSPANK 200
V +PA D+FE+ NK
Sbjct: 1510 VASSIPAKDVFENGHVNK 1527
>DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc
growth factor 2 protein.
Length = 439
Score = 21.4 bits (43), Expect = 6.8
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +2
Query: 254 GAFTPGCSKTHLPGYVQNADKLKSDGVAEIVCVSVND 364
G F G T GY + K K G IV +S++D
Sbjct: 383 GGFWVGYEDTDTAGYKASYVKAKGLGGIAIVDLSLDD 419
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,625
Number of Sequences: 336
Number of extensions: 3914
Number of successful extensions: 33
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17073220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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