Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20039
         (618 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    47   4e-04
UniRef50_Q6BJQ1 Cluster: Similar to CA2603|IPF5471 Candida albic...    33   5.5  
UniRef50_Q4JFB4 Cluster: Putative uncharacterized protein; n=1; ...    33   7.2  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 46.8 bits (106), Expect = 4e-04
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = -3

Query: 412 FLLLMWMDELTAYLVLSGYWSP 347
           FLLL W+DELTA+LVLSGYWSP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175



 Score = 32.7 bits (71), Expect = 7.2
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -2

Query: 422 NNFFFIAYVDG-RAHSLPGVKWLLEPMDIHNVNAPPTLRYKF 300
           + F  + +VD   AH +    W   P  +++VNAPPT RYKF
Sbjct: 152 SRFLLLRWVDELTAHLVLSGYW--SPRHLYDVNAPPTSRYKF 191


>UniRef50_Q6BJQ1 Cluster: Similar to CA2603|IPF5471 Candida albicans
           IPF5471 of unknown function; n=1; Debaryomyces
           hansenii|Rep: Similar to CA2603|IPF5471 Candida albicans
           IPF5471 of unknown function - Debaryomyces hansenii
           (Yeast) (Torulaspora hansenii)
          Length = 506

 Score = 33.1 bits (72), Expect = 5.5
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = -2

Query: 470 K*MLFTLEHSRFSRTKNNFFFIAYVDGRAHSLPGVKWLLEPMDIH 336
           K + F ++H  F   +NN  F+A  +    SL  ++WL + M +H
Sbjct: 223 KSLTFKVKHPHFRFRRNNKTFLAGFNNGLESLKAIEWLFDEMIVH 267


>UniRef50_Q4JFB4 Cluster: Putative uncharacterized protein; n=1;
           Staphylococcus aureus|Rep: Putative uncharacterized
           protein - Staphylococcus aureus
          Length = 104

 Score = 32.7 bits (71), Expect = 7.2
 Identities = 18/57 (31%), Positives = 28/57 (49%)
 Frame = -2

Query: 320 PTLRYKF*DLSIVTTAAPPFEPNALLLHGRNRQGGGTYSRGLTRGPTASEVKHSRNA 150
           P + Y+F DL I     P FE N  +     R+ G  YS  + + P A+ + H+R +
Sbjct: 24  PNVEYEFNDLKIEILKTPEFE-NIQIPTNDQREAGRRYSYWVKKCPDANVIIHNRKS 79


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,149,360
Number of Sequences: 1657284
Number of extensions: 13781153
Number of successful extensions: 29384
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29384
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)