Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20039
         (618 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       25   2.6  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    24   4.5  
AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    23   6.0  

>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -3

Query: 250  HYCFTAEIGKAVVPTRADSQEVLP 179
            H  F AEIG ++V    DS E+LP
Sbjct: 939  HIEFHAEIGMSLVLKVGDSSEMLP 962


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = +2

Query: 131  RGNERQTHFENVSPHWR*DLL*VRASRYHRLAY 229
            R  ERQ   E     W  D    RASRY R A+
Sbjct: 938  RREERQRSMEEWQATWGADAANERASRYVRWAH 970


>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +2

Query: 74  RTAPCVYEK*LITVAWFRSRGNERQTHFENVSPH 175
           R  P +YEK    +A F +     Q  FEN+  H
Sbjct: 329 RVIPRIYEKNCPLLALFEAVRPHLQLSFENILAH 362


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 718,434
Number of Sequences: 2352
Number of extensions: 14414
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)