Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20038
(642 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0690 + 26303733-26306540 34 0.11
06_01_0931 + 7192519-7194075 32 0.34
08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614 31 0.78
08_02_0885 + 22268287-22268988 31 1.0
03_05_0780 + 27646936-27647084,27647168-27647289,27649380-276494... 31 1.0
02_01_0567 - 4168164-4168250,4168672-4168828,4168951-4169090,417... 30 1.8
12_02_0090 + 13493311-13494180 29 2.4
11_06_0610 - 25449085-25453284 29 3.1
11_02_0037 - 7613632-7613727,7614452-7615507 29 3.1
08_01_0651 + 5622786-5624165,5624720-5624881,5624984-5625173,562... 29 3.1
07_01_0538 + 3982952-3983297,3983397-3983489,3983627-3983733 29 3.1
07_01_0655 - 4910497-4911972,4912035-4912415 29 4.1
02_04_0114 + 19879468-19880671,19882007-19882179,19882265-198826... 29 4.1
01_06_1431 + 37317248-37317907 29 4.1
09_04_0311 + 16585406-16585521,16585713-16586175 28 5.5
01_01_0699 + 5405178-5405356,5405478-5405693,5405808-5405919,540... 28 5.5
09_04_0670 + 19348468-19348949,19351594-19351724,19352433-19353238 28 7.2
04_03_0204 + 12643435-12644001 28 7.2
08_02_0824 + 21561699-21562415,21563294-21563362,21563424-215634... 27 9.6
08_01_0910 + 8968896-8968932,8969111-8969181,8970417-8970740,897... 27 9.6
08_01_0650 + 5617578-5618633,5619580-5619735,5619816-5620058 27 9.6
07_03_0094 + 13335281-13335412,13337125-13337208,13337517-13338323 27 9.6
06_03_1195 + 28311450-28312294,28312418-28312966,28314319-28314499 27 9.6
06_03_1121 + 27767707-27768065,27768612-27769034,27770013-277701... 27 9.6
05_07_0100 + 27679280-27680320 27 9.6
05_03_0441 - 14037497-14038006,14038208-14038369 27 9.6
05_01_0245 - 1829921-1830359,1830449-1831002,1832016-1832144,183... 27 9.6
04_03_0805 - 19850355-19850817,19851146-19851227,19852403-19852412 27 9.6
02_05_0827 - 32051086-32051445 27 9.6
02_02_0264 + 8404879-8405106 27 9.6
01_01_0917 + 7238721-7239078,7239590-7239957 27 9.6
>11_06_0690 + 26303733-26306540
Length = 935
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +1
Query: 382 PQLSTGASARTLPSPAARCIPPPRLRTGLRGNIAAQDPVIVHDMSPFRQACIHAVTGT 555
P L T + + S A PPP LR L G + P+IV++ AC V+GT
Sbjct: 707 PNLCTLDPEKEVESEAGIFEPPPALRAQLSGPVQCGSPLIVYERRRESLACHALVSGT 764
>06_01_0931 + 7192519-7194075
Length = 518
Score = 32.3 bits (70), Expect = 0.34
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +1
Query: 373 PSGPQLSTGASARTLPSPAARCIPPPRLRTGLRGNIAAQDPVIVHDMSPFRQACIHA 543
PS P + + +S+ PS + PP + G + A DPV+V F +ACI A
Sbjct: 10 PSSPPMPSSSSSS--PSSSFTADPPAEFLCPISGTLMA-DPVVVPPGQTFERACIQA 63
>08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614
Length = 248
Score = 31.1 bits (67), Expect = 0.78
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +1
Query: 349 GKRVR*R--VPSGPQLSTGASARTLPSPAARCIPPPRLRTG-LRGNIA 483
G+R R R + PQ + G+ A L + R PPPRLRT L G +A
Sbjct: 156 GRRSRPRRCLAGRPQATAGSPAARLAARRLRTSPPPRLRTSRLAGAVA 203
>08_02_0885 + 22268287-22268988
Length = 233
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +3
Query: 306 LTMTSGYLMERSALRKASSVTR--TVWPAAVHRCKRPNTPITSCTMHPSPPP 455
LTMT +M KA+ + T PA RC+RP+ +C M PP
Sbjct: 31 LTMTHNCVMYLKNKEKAAGSVKGKTAIPATPRRCRRPDGSNPACKMRWERPP 82
>03_05_0780 +
27646936-27647084,27647168-27647289,27649380-27649458,
27650346-27650427,27650483-27650600,27650695-27651050,
27651404-27652222,27652846-27653265,27653426-27653437
Length = 718
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +3
Query: 381 PAAVHRCKRPNTPITSC-TMHPSPPPANRSSGEYR 482
P HRC P+ +C T P+PP SS E R
Sbjct: 328 PRLTHRCSTTTQPLPTCGTPAPAPPAGQPSSAEDR 362
>02_01_0567 -
4168164-4168250,4168672-4168828,4168951-4169090,
4170318-4170456,4170562-4170830,4170914-4171000,
4171259-4171327,4171427-4171455,4171544-4171950,
4172906-4172977,4173150-4173221,4173299-4173370,
4173454-4173519,4173717-4173785,4173866-4173995,
4174846-4174975
Length = 664
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Frame = +3
Query: 267 VNFAVFSETVTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHR--------CKRPNTPI 422
VNF + S + SL + G L + L+ + ++ P+A + P++P
Sbjct: 178 VNFDISSNNFSGSLPPSLGSLSSLTTLKDGNPFNTSIAPSASPSSTPTGSTPTQTPSSPS 237
Query: 423 TSCTMHPSPPPANRSSGEYRR 485
+S T PS P+N S G R
Sbjct: 238 SSGTPSPSSSPSNSSGGSTAR 258
>12_02_0090 + 13493311-13494180
Length = 289
Score = 29.5 bits (63), Expect = 2.4
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 5/85 (5%)
Frame = +3
Query: 285 SETVTTSL---TMTSGYLMERSALRKAS--SVTRTVWPAAVHRCKRPNTPITSCTMHPSP 449
S T T+SL T ++ L RS L AS S T T P + T T + P
Sbjct: 138 SPTTTSSLATTTTSTAVLFPRSTLSSASTPSFTTTSSPVTAPKSSTKYTVATEIVLSPVF 197
Query: 450 PPANRSSGEYRRSGPCHCS*HVAFQ 524
PP+ +++ P + +VAF+
Sbjct: 198 PPSCQTTSPCTGGMPISANRNVAFK 222
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 373 PSGPQLSTGASARTLPSPAARCIPPPRLR 459
PS P+ S+ + ++LP PA +PPP ++
Sbjct: 1106 PSVPKASSPPTEKSLPPPATVSLPPPTVK 1134
>11_02_0037 - 7613632-7613727,7614452-7615507
Length = 383
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +2
Query: 305 PYDDFRLPNGKICTSESEFGNAYRLARSCPQVQAPE-HSHHQLHDASLP 448
P+ + G + +G AY AR+ P P H HH H +P
Sbjct: 223 PHHHHKNGGGLLVAGGDPYGAAYAAARALPPPPPPPPHGHHHHHQIIMP 271
>08_01_0651 +
5622786-5624165,5624720-5624881,5624984-5625173,
5625253-5625284
Length = 587
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 432 TMHPSPPPANRSSGEYRRSGPCHCS 506
T PPP NR +R S PC C+
Sbjct: 127 TSDRQPPPMNRRMRHHRASAPCPCA 151
>07_01_0538 + 3982952-3983297,3983397-3983489,3983627-3983733
Length = 181
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 399 CKRPNTPITSCTMHPSPPPA 458
CK PI+ CT P+PPPA
Sbjct: 104 CKVQAPPISQCTAVPTPPPA 123
>07_01_0655 - 4910497-4911972,4912035-4912415
Length = 618
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 6/51 (11%)
Frame = +3
Query: 147 DVFAFRQPSNRIGVGSLYGLMVF------CTSKLEVCYIEANASTWVNFAV 281
D F R S R G+ S + F C S + Y++++ S WV A+
Sbjct: 186 DQFDPRTESGRRGINSFFNWYYFTLTIAVCASSTAIVYVQSSVSWWVGLAI 236
>02_04_0114 +
19879468-19880671,19882007-19882179,19882265-19882605,
19882698-19882977,19883070-19883267,19883380-19883652
Length = 822
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Frame = +1
Query: 373 PSGPQLSTGASARTLPSPAARCIPPPR---LRT---GLRGNIAAQDPVIVHDMSPFRQAC 534
PSG + A+A A+ + PP+ LRT + G+ AA DPVI D R C
Sbjct: 151 PSGGVPAAAAAAAAAYVTKAKPVAPPKETALRTYGRDMTGSAAAADPVIGRDDEVDRVVC 210
Query: 535 I 537
I
Sbjct: 211 I 211
>01_06_1431 + 37317248-37317907
Length = 219
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +1
Query: 367 RVPSGPQLSTGASARTLPSPAARCIPPPRLRTGLRGNIAAQDPVI 501
R P P S+ +++ T SPAA PPRL + AA P I
Sbjct: 90 RSPFSPPPSSSSNSSTTASPAAAAAAPPRLIPTIPRPAAALAPHI 134
>09_04_0311 + 16585406-16585521,16585713-16586175
Length = 192
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 441 PSPPPANRSSGEYRRSGPCHCS*HVAFQTS 530
P PPP N ++ + P C HVA TS
Sbjct: 11 PPPPPTNAATSSSAMAVPYFCRKHVALATS 40
>01_01_0699 +
5405178-5405356,5405478-5405693,5405808-5405919,
5406335-5406397,5406468-5406606,5406822-5406877,
5408088-5408161,5408270-5408417,5408505-5408678,
5408809-5408896,5408996-5409109,5409728-5409825,
5409927-5410017,5410440-5410534,5410672-5410825,
5410864-5410876,5411276-5411384
Length = 640
Score = 28.3 bits (60), Expect = 5.5
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 13/56 (23%)
Frame = +3
Query: 339 SALRKASSVTRTVWP-AAVHRCK-----RPNTPI-------TSCTMHPSPPPANRS 467
SA AS+ + + P AA H C+ RP +P+ + +MHPSPPP S
Sbjct: 7 SAPSHASAASSSPLPFAAAHPCRASWTPRPTSPLPPLSLLRATASMHPSPPPEGHS 62
>09_04_0670 + 19348468-19348949,19351594-19351724,19352433-19353238
Length = 472
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +2
Query: 404 APEHSHHQLHDAS-LPPACEQVFGGISP 484
A H HHQ+ A L P +Q FGG SP
Sbjct: 375 AEHHHHHQIPMAQPLVPNLQQQFGGSSP 402
>04_03_0204 + 12643435-12644001
Length = 188
Score = 27.9 bits (59), Expect = 7.2
Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Frame = +3
Query: 210 VFCTSKLEVCYIEANASTWVNFAVFSETVTTSLTMTS-GYLMERSALRKASSVTRTVWPA 386
++C +C A+AS ++ V T + T +L + R A V W
Sbjct: 4 LYCCLVAVLCLPRASASPVAAASISVSAVQTPVEPTPVQFLRVHNEARAAVGVPPLSWNG 63
Query: 387 AVH--RCKRPNTPITSCTMHPSPPPANRSSGE 476
+ + T C++ P PP A R +G+
Sbjct: 64 TLQLDAARYAGELRTECSLRPPPPTAARGTGD 95
>08_02_0824 +
21561699-21562415,21563294-21563362,21563424-21563459,
21564533-21564600,21565259-21565277,21565662-21565763,
21566173-21566288,21566501-21566595,21568093-21568264,
21568413-21568493,21569732-21569801,21570106-21570132
Length = 523
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 373 PSGPQLSTGASARTLPSPAARCIPPPRL 456
P GP T +S+ +LPS R PPPRL
Sbjct: 4 PPGPAPGTSSSSSSLPSRRRR-RPPPRL 30
>08_01_0910 +
8968896-8968932,8969111-8969181,8970417-8970740,
8972878-8972934,8974578-8974641,8974749-8974810
Length = 204
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +3
Query: 384 AAVHRCKRPNTPITSCTMHPSP 449
A +HRC NTP+ C HP P
Sbjct: 4 AQLHRC---NTPVQGCYSHPMP 22
>08_01_0650 + 5617578-5618633,5619580-5619735,5619816-5620058
Length = 484
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = -3
Query: 454 GGGEGCIVQLVMGVFGRLHLWTAAGQTVRVTELAFRSADLSIR*PEVIVRLVVTVSEK 281
GGGE + L V GR+ A Q VR + L+ R D+ P V +R +E+
Sbjct: 26 GGGEDRLSALPDAVLGRIVSHLKAWQAVRTSVLSKRWRDVWASAPRVDIRHPCACNER 83
>07_03_0094 + 13335281-13335412,13337125-13337208,13337517-13338323
Length = 340
Score = 27.5 bits (58), Expect = 9.6
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +3
Query: 300 TSLTMTS-GYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTMHP 443
T L MTS G ++ TVWPAA+ RP P T + P
Sbjct: 80 TLLRMTSSGAAAVNFTFHFHNNCPETVWPAALSSAGRPPFPTTGFALPP 128
>06_03_1195 + 28311450-28312294,28312418-28312966,28314319-28314499
Length = 524
Score = 27.5 bits (58), Expect = 9.6
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +3
Query: 273 FAVFSETVTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTMHPSPP 452
F +FS T S T +S SA+ +A++ T T NT S +P+PP
Sbjct: 77 FLLFSTTALYSSTSSSS----SSAVLRATTTTTTTTTTTT---TTTNTFTLSFQANPNPP 129
Query: 453 PANRSS 470
P+N S+
Sbjct: 130 PSNLSN 135
>06_03_1121 +
27767707-27768065,27768612-27769034,27770013-27770175,
27770271-27770381,27770895-27770963,27771117-27771203,
27771967-27772752
Length = 665
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = +3
Query: 405 RPNTPITSCTMHPSPPPANR--SSGEYRRSG 491
RPN P+ P PPP N + E RR G
Sbjct: 574 RPNRPVGMAPFMPPPPPPNNRGTKREQRRPG 604
>05_07_0100 + 27679280-27680320
Length = 346
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 379 GPQLSTGASARTLPSPAARCIPPP 450
GP LS AS R PSP+ +PPP
Sbjct: 130 GPTLSASASKRPSPSPSP--VPPP 151
>05_03_0441 - 14037497-14038006,14038208-14038369
Length = 223
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/33 (57%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = +1
Query: 388 LSTGASAR--TLPSPA-ARCIPPPRLRTGLRGN 477
LS GASA+ TLPSPA ARC P R RG+
Sbjct: 102 LSLGASAQATTLPSPALARCGTPRPRRPPPRGS 134
>05_01_0245 -
1829921-1830359,1830449-1831002,1832016-1832144,
1832249-1832339,1832646-1832758,1832836-1833079,
1833193-1833281,1833357-1833424,1833790-1833874,
1834038-1834190
Length = 654
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +3
Query: 408 PNTPITSCTMHPSPPPANRS-SGEYRRSGP 494
P P+ S HP PP + E++R+GP
Sbjct: 382 PEAPLASDMAHPPPPKTEKELVDEWKRAGP 411
>04_03_0805 - 19850355-19850817,19851146-19851227,19852403-19852412
Length = 184
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 5/30 (16%)
Frame = +3
Query: 429 CTMHPSPPP-----ANRSSGEYRRSGPCHC 503
C HP PPP A + G S PCHC
Sbjct: 128 CDCHPKPPPPAPAPAKPACGCPAWSSPCHC 157
>02_05_0827 - 32051086-32051445
Length = 119
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +1
Query: 418 PSPAARCIPPPRLRTGLRGNIAA 486
P+ AARC P PRL G G AA
Sbjct: 78 PAAAARCPPDPRLSAGFGGWPAA 100
>02_02_0264 + 8404879-8405106
Length = 75
Score = 27.5 bits (58), Expect = 9.6
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +3
Query: 315 TSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTMHPSPPPANRSSGEYR 482
T+ + + + + T +V P A R P P +S + P+P P S EYR
Sbjct: 3 TNAHAFQTTTETARAQNTASVPPHAPSRTPYPPLPSSSSSSTPTPTPVLAVSREYR 58
>01_01_0917 + 7238721-7239078,7239590-7239957
Length = 241
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +1
Query: 397 GASARTLPSPAARCIPPPRLRTG 465
G+S +L SP A PPP LRTG
Sbjct: 155 GSSIFSLKSPLAWTQPPPSLRTG 177
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,892,147
Number of Sequences: 37544
Number of extensions: 409194
Number of successful extensions: 1890
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1877
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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