Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20038
         (642 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    26   0.88 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   3.6  
AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.    24   3.6  
Y17688-1|CAA76813.1|  153|Anopheles gambiae gSG1 protein protein.      24   4.7  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         24   4.7  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         24   4.7  
AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.     24   4.7  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     23   8.2  

>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 26.2 bits (55), Expect = 0.88
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = +3

Query: 393 HRCKRPNTPITSCTMHPSPPPANRSSGEYRRSGPCHCS 506
           HRC++P      C M  +  P + +  +Y R    +CS
Sbjct: 205 HRCRKPGHMKRDCPMESNNTPTSTTMRDYSRKNE-NCS 241


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 414 TPITSCTMHPSPPPANRSS 470
           T   S + HPSP PA R+S
Sbjct: 734 TSSKSASTHPSPHPATRAS 752


>AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.
          Length = 391

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +1

Query: 529 ACIHAVTGTDAAKDXHEACDLGRGMAAXALTGXL 630
           A +H V G +A K   E C L  G    ++ G L
Sbjct: 17  AQLHVVVGEEAPKPEKEICGLKVGRLLDSVKGWL 50


>Y17688-1|CAA76813.1|  153|Anopheles gambiae gSG1 protein protein.
          Length = 153

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 448 GEGCIVQLVMGVFGRL 401
           GE C++QLV G+  RL
Sbjct: 18  GEQCVIQLVRGMVTRL 33


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = +2

Query: 401 QAPEHSHHQLHDASLPPACEQVFGGISPLRTLSLFMTCRLSDK 529
           Q P H HHQ H    P          SP  ++S  +T  LSD+
Sbjct: 102 QLPHHPHHQHHPQQQPSP------QTSPPASISFSITNILSDR 138



 Score = 23.4 bits (48), Expect = 6.2
 Identities = 18/55 (32%), Positives = 23/55 (41%)
 Frame = +3

Query: 291 TVTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTMHPSPPP 455
           T TTS T TSG     S  R   SV   + P  + +      P+ S    P+ PP
Sbjct: 43  TTTTSTTSTSGASAASSPTRDEMSVVVPISPLHIKQ-----EPLGSDGPMPAQPP 92


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = +2

Query: 401 QAPEHSHHQLHDASLPPACEQVFGGISPLRTLSLFMTCRLSDK 529
           Q P H HHQ H    P          SP  ++S  +T  LSD+
Sbjct: 102 QLPHHPHHQHHPQQQPSP------QTSPPASISFSITNILSDR 138



 Score = 23.4 bits (48), Expect = 6.2
 Identities = 18/55 (32%), Positives = 23/55 (41%)
 Frame = +3

Query: 291 TVTTSLTMTSGYLMERSALRKASSVTRTVWPAAVHRCKRPNTPITSCTMHPSPPP 455
           T TTS T TSG     S  R   SV   + P  + +      P+ S    P+ PP
Sbjct: 43  TTTTSTTSTSGASAASSPTRDEMSVVVPISPLHIKQ-----EPLGSDGPMPAQPP 92


>AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.
          Length = 401

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -3

Query: 448 GEGCIVQLVMGVFGRL 401
           GE C++QLV G+  RL
Sbjct: 18  GEQCVIQLVRGMVTRL 33


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 23.0 bits (47), Expect = 8.2
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 246 EANASTWVNFAVFSET 293
           + NA+ W N+A FS T
Sbjct: 265 KGNATVWENYAEFSHT 280


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,398
Number of Sequences: 2352
Number of extensions: 13971
Number of successful extensions: 33
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)