Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20037
         (704 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             26   0.40 
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   2.8  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    23   2.8  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   2.8  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   8.6  
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    21   8.6  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.8 bits (54), Expect = 0.40
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +2

Query: 503 TGGLTKFVETDGEGAEPVPSVTEFEEEEDVPARDE 607
           T  L K  + DGEGA+      E EEEED   + E
Sbjct: 263 TRRLRKRRQNDGEGADDRDDDEENEEEEDGRGQSE 297


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +2

Query: 41  GMKKDEVPSARLIALEQDMAKYKPSSNELSPXAIEEFVQS--FFDCTLKQ 184
           GMK++ V   R    E+D ++ + +S+  S   IE  +++    +C ++Q
Sbjct: 174 GMKREAVQEERQRTKERDQSEVESTSSLHSDMPIERILEAEKRVECKMEQ 223


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +3

Query: 354 GEHFENDDDVIIAKIDATANELEHTKITSFPTIKLYSKDNQVHDYNGE 497
           G++F NDDD+    I   AN  ++ K      + L  +  +V D NG+
Sbjct: 293 GKNFNNDDDIKSYLIQFFAN--KNQKFYERGIMMLPERWQKVIDQNGQ 338


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +2

Query: 41  GMKKDEVPSARLIALEQDMAKYKPSSNELSPXAIEEFVQS--FFDCTLKQ 184
           GMK++ V   R    E+D ++ + +S+  S   IE  +++    +C ++Q
Sbjct: 174 GMKREAVQEERQRTKERDQSEVESTSSLHSDMPIERILEAEKRVECKMEQ 223


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 648 WKSHKRAPRPSVYN 607
           W S K  PR S+Y+
Sbjct: 370 WSSQKSEPRRSIYS 383


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 286 TFLVVSKTLRQVGGDEHFDGFGG 218
           +FL+++     VGG   F GFGG
Sbjct: 8   SFLLLAVFSMLVGGFGGFGGFGG 30


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,687
Number of Sequences: 438
Number of extensions: 3406
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)