BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbS20030 (736 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 24 1.3 AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 2.3 AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 6.9 >AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. Length = 735 Score = 24.2 bits (50), Expect = 1.3 Identities = 9/19 (47%), Positives = 15/19 (78%) Frame = +1 Query: 661 SGVNLIQQVLQNHSNNPSQ 717 SG++ +QQ+LQ H +P+Q Sbjct: 69 SGIHQMQQLLQQHILSPTQ 87 >AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex determiner protein. Length = 407 Score = 23.4 bits (48), Expect = 2.3 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = +3 Query: 405 EKRTRERSNTTGTIGSWI*RW*NN*NQHENY*KR 506 ++R RERS + I S + +N N ++NY K+ Sbjct: 302 DRRERERSKESKIISSLSNKTIHNNNNYKNYNKK 335 >AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine receptor protein. Length = 694 Score = 21.8 bits (44), Expect = 6.9 Identities = 9/19 (47%), Positives = 13/19 (68%) Frame = -3 Query: 362 ESDLSPNPRPIYAARPLSS 306 E++ SP+P P A+ P SS Sbjct: 506 ETNSSPSPNPRIASAPSSS 524 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 179,325 Number of Sequences: 438 Number of extensions: 3557 Number of successful extensions: 10 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 22901220 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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