Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20029
         (681 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7QH94 Cluster: ENSANGP00000003943; n=3; Endopterygota|...   106   6e-22
UniRef50_UPI00015B42B2 Cluster: PREDICTED: similar to ENSANGP000...   102   9e-21
UniRef50_Q8MSC8 Cluster: LD14533p; n=5; Diptera|Rep: LD14533p - ...    97   3e-19
UniRef50_A7S2W6 Cluster: Predicted protein; n=2; Eumetazoa|Rep: ...    65   2e-09
UniRef50_Q7Q387 Cluster: ENSANGP00000002422; n=5; Endopterygota|...    57   3e-07
UniRef50_Q9VEK0 Cluster: CG14331-PA; n=2; Sophophora|Rep: CG1433...    46   6e-04
UniRef50_A7SDY4 Cluster: Predicted protein; n=2; Eumetazoa|Rep: ...    46   9e-04
UniRef50_A7RYM8 Cluster: Predicted protein; n=1; Nematostella ve...    39   0.098
UniRef50_A7SPF2 Cluster: Predicted protein; n=1; Nematostella ve...    38   0.30 
UniRef50_Q68A30 Cluster: Putative uncharacterized protein Ci-Mec...    36   1.2  
UniRef50_A0E3P4 Cluster: Chromosome undetermined scaffold_77, wh...    34   3.7  
UniRef50_Q5KZI4 Cluster: Spore germination protein; n=2; Geobaci...    33   6.4  
UniRef50_Q5FSF3 Cluster: Putative polyphosphate-selective porin ...    33   6.4  
UniRef50_Q095N0 Cluster: Putative uncharacterized protein; n=1; ...    33   8.5  

>UniRef50_Q7QH94 Cluster: ENSANGP00000003943; n=3;
           Endopterygota|Rep: ENSANGP00000003943 - Anopheles
           gambiae str. PEST
          Length = 283

 Score =  106 bits (254), Expect = 6e-22
 Identities = 42/77 (54%), Positives = 56/77 (72%)
 Frame = +3

Query: 267 MSARCLVPSNYLIWEATRPLANCAYCENVTKPIVLYNVTRHEFNKYAYSTGPIIVKNAIK 446
           +  RC+VP+NYLIWEATRP++NC +C  V +PI+L N+TR EF+ YAYS+ PII+K A+ 
Sbjct: 41  LGMRCIVPNNYLIWEATRPVSNCDFCRGVDRPIILQNLTREEFHPYAYSSRPIIIKRAVS 100

Query: 447 SWRATKEFNYKMFKRLY 497
            W A +  NY   K LY
Sbjct: 101 HWPAVRALNYTFLKDLY 117



 Score = 47.2 bits (107), Expect = 4e-04
 Identities = 18/39 (46%), Positives = 29/39 (74%)
 Frame = +2

Query: 518 ESLDDGCQFLNFKTDLFSLKEVFNMPEERVKNEPGQKPW 634
           +SL + CQFL+FK++  +L++VF M +ER +   GQ+PW
Sbjct: 125 DSLHEDCQFLHFKSNFQTLRDVFRMSDERAEFRAGQQPW 163


>UniRef50_UPI00015B42B2 Cluster: PREDICTED: similar to
           ENSANGP00000003943; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to ENSANGP00000003943 - Nasonia
           vitripennis
          Length = 323

 Score =  102 bits (244), Expect = 9e-21
 Identities = 42/78 (53%), Positives = 56/78 (71%)
 Frame = +3

Query: 270 SARCLVPSNYLIWEATRPLANCAYCENVTKPIVLYNVTRHEFNKYAYSTGPIIVKNAIKS 449
           + RCLVP+NYL+WE TRP++NC +C  V   +VL N+T+ EF KYAYS+ PIIVK A   
Sbjct: 83  NTRCLVPNNYLVWEFTRPVSNCDFCRGVNSALVLNNLTKEEFQKYAYSSKPIIVKKAASH 142

Query: 450 WRATKEFNYKMFKRLYEE 503
           W A+K F+ + F  LYE+
Sbjct: 143 WMASKVFSLQFFHSLYEQ 160



 Score = 57.6 bits (133), Expect = 3e-07
 Identities = 24/50 (48%), Positives = 37/50 (74%), Gaps = 4/50 (8%)
 Frame = +2

Query: 509 GSYESLDDGCQFLNFKTDLFSLKEVFNMPEERVKNEPGQKP----WGNCH 646
           G+YES+++ CQFL+F+++  +LKEVF+M E+R  N PG++     W NCH
Sbjct: 163 GAYESVEEECQFLHFRSNFANLKEVFSMSEQRAMNLPGEEAWYIGWKNCH 212


>UniRef50_Q8MSC8 Cluster: LD14533p; n=5; Diptera|Rep: LD14533p -
           Drosophila melanogaster (Fruit fly)
          Length = 330

 Score = 97.1 bits (231), Expect = 3e-19
 Identities = 39/84 (46%), Positives = 56/84 (66%)
 Frame = +3

Query: 267 MSARCLVPSNYLIWEATRPLANCAYCENVTKPIVLYNVTRHEFNKYAYSTGPIIVKNAIK 446
           +  RC +P+NYL+WEATRP+++C +C+ V  P++L N+T  EF  +AYS+ PIIVK A+ 
Sbjct: 93  LGVRCFLPNNYLVWEATRPISDCEFCKGVRAPLILANLTMEEFAPHAYSSMPIIVKRAVA 152

Query: 447 SWRATKEFNYKMFKRLYEETGVAM 518
            W A K  ++   K LYE    AM
Sbjct: 153 HWPAQKNLSFAFIKELYESVPGAM 176



 Score = 39.5 bits (88), Expect = 0.074
 Identities = 19/38 (50%), Positives = 24/38 (63%)
 Frame = +2

Query: 521 SLDDGCQFLNFKTDLFSLKEVFNMPEERVKNEPGQKPW 634
           ++D  CQFL+F +DL SLK VF+M  ER     G  PW
Sbjct: 175 AMDSDCQFLHFNSDLKSLKHVFSMSAERSNLTQG-VPW 211


>UniRef50_A7S2W6 Cluster: Predicted protein; n=2; Eumetazoa|Rep:
           Predicted protein - Nematostella vectensis
          Length = 247

 Score = 64.9 bits (151), Expect = 2e-09
 Identities = 26/83 (31%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
 Frame = +3

Query: 279 CLVPSNYLIWEATRPLANCAYCENVTKPIVLYNVTRHEF-NKYAYSTGPIIVKNAIKSWR 455
           CL P    + +  RP  +C+ C ++ K   + N+T  EF  KYAYS  P+++++ +K+W 
Sbjct: 9   CLFPIPEFVLDRFRPPIDCSICRDIHKVERVSNITPQEFAKKYAYSARPVVIEDGMKNWT 68

Query: 456 ATKEFNYKMFKRLYEETGVAMRA 524
           A++ F++  FK++Y     A+++
Sbjct: 69  ASEHFSFDFFKKVYSPDSPALKS 91



 Score = 42.7 bits (96), Expect = 0.008
 Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
 Frame = +2

Query: 503 DWGSYESLDDGCQFLNFKTDLFSLKEVFNMPEE--RVKNEPGQKPWGNCHS 649
           D  + +S D  CQF  + T   +LKEVF MPE+  ++K +P    W NC S
Sbjct: 85  DSPALKSRDGQCQFFPYNTKFSTLKEVFQMPEKDAQMKGKPWYIGWSNCDS 135


>UniRef50_Q7Q387 Cluster: ENSANGP00000002422; n=5;
           Endopterygota|Rep: ENSANGP00000002422 - Anopheles
           gambiae str. PEST
          Length = 239

 Score = 57.2 bits (132), Expect = 3e-07
 Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
 Frame = +3

Query: 279 CLVPSNYLIWEATRPLANCAYCENVTKPIV-LYNVTRHEFNK-YAYSTGPIIVKNAIKSW 452
           C++     + +A RP  +C +C  V   +  L NV+  EF + YAY  GP+IV +A  +W
Sbjct: 1   CILTMPAQLQKAFRPPESCDFCRAVRGTVPRLSNVSPAEFARDYAYRGGPVIVTDATVNW 60

Query: 453 RATKEFNYKMFKRLYEETGVAMRA 524
            A + F++  FKR+YE  G   RA
Sbjct: 61  TAVESFDFWFFKRVYETHGSGPRA 84



 Score = 41.1 bits (92), Expect = 0.024
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = +2

Query: 536 CQFLNFKTDLFSLKEVFNMPEERVKNEPGQKPW 634
           CQF  ++T    ++E F++PE RV+ +PG  PW
Sbjct: 87  CQFFPYQTGFRDIREAFSLPESRVRYDPGTVPW 119


>UniRef50_Q9VEK0 Cluster: CG14331-PA; n=2; Sophophora|Rep:
           CG14331-PA - Drosophila melanogaster (Fruit fly)
          Length = 248

 Score = 46.4 bits (105), Expect = 6e-04
 Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
 Frame = +2

Query: 536 CQFLNFKTDLFSLKEVFNMPEERVKNEPGQKP----WGNCHS 649
           CQFL +KT    + +  +MPE+RV+ +PG++P    W NCH+
Sbjct: 96  CQFLPYKTGFLDIYDALDMPEDRVELKPGEQPWYFGWSNCHA 137


>UniRef50_A7SDY4 Cluster: Predicted protein; n=2; Eumetazoa|Rep:
           Predicted protein - Nematostella vectensis
          Length = 174

 Score = 46.0 bits (104), Expect = 9e-04
 Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
 Frame = +2

Query: 512 SYESLDDGCQFLNFKTDLFSLKEVFNMPEERV--KNEPGQKPWGNC 643
           SY+  ++ CQF  +KT+  +LK+ F+MP+ER   K +P    W NC
Sbjct: 16  SYKITEEECQFFPYKTEFLTLKDAFHMPKERAEFKGKPWYIGWSNC 61


>UniRef50_A7RYM8 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 239

 Score = 39.1 bits (87), Expect = 0.098
 Identities = 17/78 (21%), Positives = 36/78 (46%)
 Frame = +3

Query: 279 CLVPSNYLIWEATRPLANCAYCENVTKPIVLYNVTRHEFNKYAYSTGPIIVKNAIKSWRA 458
           C V + Y + +          C+ +    V+     +E + + +S  P+I+ +A   W+A
Sbjct: 125 CFVKNPYYVEQKLTKKDCRENCKELKTIGVIEKTDANEMSDFLFSETPVIINDATDDWQA 184

Query: 459 TKEFNYKMFKRLYEETGV 512
            K+F+ +   +LY E  +
Sbjct: 185 RKDFSIEFLAKLYSENSI 202


>UniRef50_A7SPF2 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 512

 Score = 37.5 bits (83), Expect = 0.30
 Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = +3

Query: 321 PLANCAYCENVTKPIVLYNVTRHEF-NKYAYSTGPIIVKNAIKSWRATKEFNYKMFKRLY 497
           PL   A CE +  P      ++ EF NKY + + P+I+ +AIK W A +++  +  +  Y
Sbjct: 187 PLEIGAMCERIAMP------SQEEFLNKYLFRSKPVIITDAIKHWPAIQKWTNEFLRAKY 240

Query: 498 EET 506
             T
Sbjct: 241 SNT 243


>UniRef50_Q68A30 Cluster: Putative uncharacterized protein Ci-Mech2;
           n=1; Ciona intestinalis|Rep: Putative uncharacterized
           protein Ci-Mech2 - Ciona intestinalis (Transparent sea
           squirt)
          Length = 360

 Score = 35.5 bits (78), Expect = 1.2
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +3

Query: 330 NCAYCENVTKPIVLYNVTRHEFNKYAYSTGPIIVKNAIKSWRA-TKEFNYKMFKRLY 497
           +C  C N+T     + VT  E     Y   P+IV +A+  WR+ T+   +  F  L+
Sbjct: 131 DCEACVNITSLNATFKVTSEEIADKIYGYEPVIVGDAMNDWRSITQNLTFNQFIDLH 187


>UniRef50_A0E3P4 Cluster: Chromosome undetermined scaffold_77, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_77,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 182

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 15/59 (25%), Positives = 32/59 (54%)
 Frame = +3

Query: 393 FNKYAYSTGPIIVKNAIKSWRATKEFNYKMFKRLYEETGVAMRAWMTDVNS*ILKLTCL 569
           FN+  YS   I+   +  S++   +F+ +  K +Y+ TG+++  +M    S +++L  L
Sbjct: 20  FNRLQYSIQEILQNQSNYSYKLVNDFSAQSIKMVYQSTGISLAFYMIVTASYVIQLIVL 78


>UniRef50_Q5KZI4 Cluster: Spore germination protein; n=2;
           Geobacillus|Rep: Spore germination protein - Geobacillus
           kaustophilus
          Length = 511

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 17/81 (20%), Positives = 37/81 (45%)
 Frame = +3

Query: 234 IAVDIVCLNNFMSARCLVPSNYLIWEATRPLANCAYCENVTKPIVLYNVTRHEFNKYAYS 413
           I+ ++  +   + + CLV   +++   ++      Y E++T P ++  V R   N Y  S
Sbjct: 170 ISKNVALIRKRIRSHCLVYEPFIVGTRSQTKVGLLYIEDITNPTMIGEVRRRLLNLYVDS 229

Query: 414 TGPIIVKNAIKSWRATKEFNY 476
              +   N I+ W + + F +
Sbjct: 230 ---VTSTNQIEHWISDRRFAF 247


>UniRef50_Q5FSF3 Cluster: Putative polyphosphate-selective porin O;
           n=1; Gluconobacter oxydans|Rep: Putative
           polyphosphate-selective porin O - Gluconobacter oxydans
           (Gluconobacter suboxydans)
          Length = 563

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = +1

Query: 40  IMEINNALQKTNLKKRICAVQKTAIANGLNNFEMKQFDLICDYNH 174
           ++++N+ L   N K  I   Q+T    GLN +  + F L+ DY+H
Sbjct: 491 VIDLNSNLNDANSKNVIRGGQQTVWTGGLNWYPNRHFRLMLDYSH 535


>UniRef50_Q095N0 Cluster: Putative uncharacterized protein; n=1;
           Stigmatella aurantiaca DW4/3-1|Rep: Putative
           uncharacterized protein - Stigmatella aurantiaca DW4/3-1
          Length = 413

 Score = 32.7 bits (71), Expect = 8.5
 Identities = 15/40 (37%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
 Frame = +3

Query: 345 ENVTKPIVLYNVTRHEFNKYAYSTG-PIIVKNAIKSWRAT 461
           +NVT+   + +++R EF ++  S G P+IV+  +K WRA+
Sbjct: 140 DNVTEIQRVKDLSREEFERHFASCGQPVIVEGPVKRWRAS 179


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,160,935
Number of Sequences: 1657284
Number of extensions: 10245563
Number of successful extensions: 25889
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 25058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25885
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52892566912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)