Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20029
         (681 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    25   0.43 
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    25   0.43 
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    25   0.57 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   2.3  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    23   2.3  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   4.0  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   5.3  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   9.3  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   9.3  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 25.4 bits (53), Expect = 0.43
 Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +3

Query: 342 CENVTKPIVLYNVTRHEFNKYAYSTGPIIVKNAIKSW-RATKEFNYKMFKRLYE 500
           C N+        + RH FN++  S    +  +   SW ++ KEF  ++ K + E
Sbjct: 384 CSNIQTGEQFARLLRHNFNRHLNSNRAPLGLHFHASWLKSKKEFKEELIKFIEE 437


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 25.4 bits (53), Expect = 0.43
 Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +3

Query: 342 CENVTKPIVLYNVTRHEFNKYAYSTGPIIVKNAIKSW-RATKEFNYKMFKRLYE 500
           C N+        + RH FN++  S    +  +   SW ++ KEF  ++ K + E
Sbjct: 391 CSNIQTGEQFARLLRHNFNRHLNSNRAPLGLHFHASWLKSKKEFKEELIKFIEE 444


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +3

Query: 189 EVQQKADFCIINTIFIAVDIV 251
           EVQQ A   ++N IFIAV IV
Sbjct: 357 EVQQLAGKFLLNYIFIAVGIV 377


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = +3

Query: 384 RHEFNKYAYSTGPIIVKNAIKSWRATKEFNYKMFKR 491
           RH FN+     G  +    I S   T E  ++++ R
Sbjct: 417 RHAFNEETVQPGNSVFLKCIASGNPTPEITWELYGR 452


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 439 AFLTMIGPVEYAYLL 395
           +F+T++G  EYAY L
Sbjct: 77  SFITLVGGPEYAYCL 91


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 171 IIVAN*IKLFHFKIIQTICNSGFLNC 94
           ++V   I + HFKIIQ +    ++NC
Sbjct: 199 VMVVTHITMAHFKIIQVVPYC-YINC 223


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 365 YGFSYIFTIGTIC*WS 318
           Y    I TIG +C WS
Sbjct: 44  YTIGVIITIGCLCIWS 59


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = -3

Query: 295 LLGTKHLALIKLFRQTISTAIKIVLIIQKSAFC*TSQIYH 176
           L+G  +  L  +  Q +   + IVL I K+       +YH
Sbjct: 253 LIGDAYAVLNSVLFQNVYKPLPIVLSIVKNCLSYCFNLYH 292


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = -3

Query: 295 LLGTKHLALIKLFRQTISTAIKIVLIIQKSAFC*TSQIYH 176
           L+G  +  L  +  Q +   + IVL I K+       +YH
Sbjct: 253 LIGDAYAVLNSVLFQNVYKPLPIVLSIVKNCLSYCFNLYH 292


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,866
Number of Sequences: 336
Number of extensions: 3087
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17801955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)