Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20029
(681 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118903-1|AAM50763.1| 330|Drosophila melanogaster LD14533p pro... 97 2e-20
AE014296-237|AAF47483.3| 330|Drosophila melanogaster CG2211-PA ... 97 2e-20
AE014297-2357|AAF55421.2| 248|Drosophila melanogaster CG14331-P... 46 4e-05
X14769-1|CAA32877.1| 237|Drosophila melanogaster ninaA protein. 30 3.4
M22851-1|AAA28717.1| 237|Drosophila melanogaster cyclosporine A... 30 3.4
AY119494-1|AAM50148.1| 237|Drosophila melanogaster GH08867p pro... 30 3.4
AE014134-179|AAF51437.1| 237|Drosophila melanogaster CG3966-PA ... 30 3.4
AY069143-1|AAL39288.1| 507|Drosophila melanogaster GH15894p pro... 29 4.5
AE013599-4003|AAF47308.1| 507|Drosophila melanogaster CG2736-PA... 29 4.5
>AY118903-1|AAM50763.1| 330|Drosophila melanogaster LD14533p
protein.
Length = 330
Score = 97.1 bits (231), Expect = 2e-20
Identities = 39/84 (46%), Positives = 56/84 (66%)
Frame = +3
Query: 267 MSARCLVPSNYLIWEATRPLANCAYCENVTKPIVLYNVTRHEFNKYAYSTGPIIVKNAIK 446
+ RC +P+NYL+WEATRP+++C +C+ V P++L N+T EF +AYS+ PIIVK A+
Sbjct: 93 LGVRCFLPNNYLVWEATRPISDCEFCKGVRAPLILANLTMEEFAPHAYSSMPIIVKRAVA 152
Query: 447 SWRATKEFNYKMFKRLYEETGVAM 518
W A K ++ K LYE AM
Sbjct: 153 HWPAQKNLSFAFIKELYESVPGAM 176
Score = 39.5 bits (88), Expect = 0.004
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = +2
Query: 521 SLDDGCQFLNFKTDLFSLKEVFNMPEERVKNEPGQKPW 634
++D CQFL+F +DL SLK VF+M ER G PW
Sbjct: 175 AMDSDCQFLHFNSDLKSLKHVFSMSAERSNLTQG-VPW 211
>AE014296-237|AAF47483.3| 330|Drosophila melanogaster CG2211-PA
protein.
Length = 330
Score = 97.1 bits (231), Expect = 2e-20
Identities = 39/84 (46%), Positives = 56/84 (66%)
Frame = +3
Query: 267 MSARCLVPSNYLIWEATRPLANCAYCENVTKPIVLYNVTRHEFNKYAYSTGPIIVKNAIK 446
+ RC +P+NYL+WEATRP+++C +C+ V P++L N+T EF +AYS+ PIIVK A+
Sbjct: 93 LGVRCFLPNNYLVWEATRPISDCEFCKGVRAPLILANLTMEEFAPHAYSSMPIIVKRAVA 152
Query: 447 SWRATKEFNYKMFKRLYEETGVAM 518
W A K ++ K LYE AM
Sbjct: 153 HWPAQKNLSFAFIKELYESVPGAM 176
Score = 39.5 bits (88), Expect = 0.004
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = +2
Query: 521 SLDDGCQFLNFKTDLFSLKEVFNMPEERVKNEPGQKPW 634
++D CQFL+F +DL SLK VF+M ER G PW
Sbjct: 175 AMDSDCQFLHFNSDLKSLKHVFSMSAERSNLTQG-VPW 211
>AE014297-2357|AAF55421.2| 248|Drosophila melanogaster CG14331-PA
protein.
Length = 248
Score = 46.4 bits (105), Expect = 4e-05
Identities = 18/42 (42%), Positives = 28/42 (66%), Gaps = 4/42 (9%)
Frame = +2
Query: 536 CQFLNFKTDLFSLKEVFNMPEERVKNEPGQKP----WGNCHS 649
CQFL +KT + + +MPE+RV+ +PG++P W NCH+
Sbjct: 96 CQFLPYKTGFLDIYDALDMPEDRVELKPGEQPWYFGWSNCHA 137
>X14769-1|CAA32877.1| 237|Drosophila melanogaster ninaA protein.
Length = 237
Score = 29.9 bits (64), Expect = 3.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 664 WIVISGMTVTPRFLSWFIFHSFFRHIENF 578
WI +G+ VT F IFH FFR + +
Sbjct: 208 WIKAAGLPVTSSFCVLLIFHYFFRQLNMY 236
>M22851-1|AAA28717.1| 237|Drosophila melanogaster cyclosporine A
binding protein protein.
Length = 237
Score = 29.9 bits (64), Expect = 3.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 664 WIVISGMTVTPRFLSWFIFHSFFRHIENF 578
WI +G+ VT F IFH FFR + +
Sbjct: 208 WIKAAGLPVTSSFCVLLIFHYFFRQLNMY 236
>AY119494-1|AAM50148.1| 237|Drosophila melanogaster GH08867p
protein.
Length = 237
Score = 29.9 bits (64), Expect = 3.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 664 WIVISGMTVTPRFLSWFIFHSFFRHIENF 578
WI +G+ VT F IFH FFR + +
Sbjct: 208 WIKAAGLPVTSSFCVLLIFHYFFRQLNMY 236
>AE014134-179|AAF51437.1| 237|Drosophila melanogaster CG3966-PA
protein.
Length = 237
Score = 29.9 bits (64), Expect = 3.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 664 WIVISGMTVTPRFLSWFIFHSFFRHIENF 578
WI +G+ VT F IFH FFR + +
Sbjct: 208 WIKAAGLPVTSSFCVLLIFHYFFRQLNMY 236
>AY069143-1|AAL39288.1| 507|Drosophila melanogaster GH15894p
protein.
Length = 507
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3
Query: 297 YLIWEATRP-LANCAYCENVTKPI-VLYNVTRHEFNKYAYSTGP 422
Y +WE TRP L + N+ + VLYN + + Y + GP
Sbjct: 176 YFLWEFTRPLLQTLSRISNIRPNVAVLYNALKEKEEVYTVNIGP 219
>AE013599-4003|AAF47308.1| 507|Drosophila melanogaster CG2736-PA
protein.
Length = 507
Score = 29.5 bits (63), Expect = 4.5
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3
Query: 297 YLIWEATRP-LANCAYCENVTKPI-VLYNVTRHEFNKYAYSTGP 422
Y +WE TRP L + N+ + VLYN + + Y + GP
Sbjct: 176 YFLWEFTRPLLQTLSRISNIRPNVAVLYNALKEKEEVYTVNIGP 219
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,288,774
Number of Sequences: 53049
Number of extensions: 462441
Number of successful extensions: 1119
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -