Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20026
(653 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q2F5V8 Cluster: Stathmin; n=3; Endopterygota|Rep: Stath... 132 7e-30
UniRef50_UPI0000D5639F Cluster: PREDICTED: similar to CG31641-PC... 90 4e-17
UniRef50_Q8IPK0 Cluster: CG31641-PB, isoform B; n=10; Diptera|Re... 80 5e-14
UniRef50_Q568Y8 Cluster: Stmn4 protein; n=9; Mammalia|Rep: Stmn4... 60 3e-08
UniRef50_UPI00005A4639 Cluster: PREDICTED: similar to Stathmin 3... 59 8e-08
UniRef50_Q9NZ72 Cluster: Stathmin-3; n=57; Euteleostomi|Rep: Sta... 59 1e-07
UniRef50_P16949 Cluster: Stathmin; n=70; Euteleostomi|Rep: Stath... 58 1e-07
UniRef50_UPI0000F1E5FC Cluster: PREDICTED: similar to stathmin-l... 50 4e-05
UniRef50_UPI000065DE94 Cluster: Stathmin-2 (SCG10 protein) (Supe... 46 0.001
UniRef50_P21561 Cluster: Uncharacterized 50.6 kDa protein in the... 38 0.21
UniRef50_A3TUV5 Cluster: Putative uncharacterized protein; n=3; ... 37 0.37
UniRef50_Q2QUC0 Cluster: Putative uncharacterized protein; n=2; ... 36 0.64
UniRef50_UPI0000D9C5D4 Cluster: PREDICTED: similar to SCG10-like... 36 1.1
UniRef50_Q5GRS5 Cluster: DNA recombination protein rmuC homolog;... 35 2.0
UniRef50_A6GDU2 Cluster: Sensor protein; n=1; Plesiocystis pacif... 34 3.4
UniRef50_A5NZZ8 Cluster: LigA; n=1; Methylobacterium sp. 4-46|Re... 33 4.5
UniRef50_A5KAV8 Cluster: Merozoite surface protein 3 (MSP3), put... 33 4.5
UniRef50_UPI0000EBD517 Cluster: PREDICTED: hypothetical protein;... 29 5.5
UniRef50_Q76B35 Cluster: Gag-like protein; n=2; Takifugu rubripe... 33 6.0
UniRef50_Q6MQR4 Cluster: Putative periplasmic protein TonB; n=1;... 33 6.0
UniRef50_A7SA31 Cluster: Predicted protein; n=1; Nematostella ve... 33 7.9
UniRef50_Q8ZVZ9 Cluster: P. aerophilum family 417, putative ATP ... 33 7.9
>UniRef50_Q2F5V8 Cluster: Stathmin; n=3; Endopterygota|Rep: Stathmin
- Bombyx mori (Silk moth)
Length = 291
Score = 132 bits (319), Expect = 7e-30
Identities = 69/90 (76%), Positives = 70/90 (77%)
Frame = +2
Query: 245 KDSSVEEIQEKLKAAEERRRSLEXXXXXXXXXXXXXXXXXSRIRSEQTNNFIVATKEALD 424
K SVEEIQEKLKAAEERRRSLE SRIRSEQTNNFIVATKEALD
Sbjct: 43 KTPSVEEIQEKLKAAEERRRSLEASKMAAIAQKMAKIEEASRIRSEQTNNFIVATKEALD 102
Query: 425 AKMETHEEKREAYINELRSRLKDHLEGVRR 514
AKMETHEEKREAYINELRSRLKDHLEGV +
Sbjct: 103 AKMETHEEKREAYINELRSRLKDHLEGVEK 132
Score = 84.6 bits (200), Expect = 2e-15
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +1
Query: 511 KTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKMIERLRE 633
KTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKMIERLRE
Sbjct: 132 KTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKMIERLRE 172
Score = 83.4 bits (197), Expect = 4e-15
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +3
Query: 120 MEVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRAD 236
MEVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRAD
Sbjct: 1 MEVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRAD 39
>UniRef50_UPI0000D5639F Cluster: PREDICTED: similar to CG31641-PC,
isoform C; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG31641-PC, isoform C - Tribolium castaneum
Length = 352
Score = 90.2 bits (214), Expect = 4e-17
Identities = 43/91 (47%), Positives = 60/91 (65%)
Frame = +2
Query: 242 RKDSSVEEIQEKLKAAEERRRSLEXXXXXXXXXXXXXXXXXSRIRSEQTNNFIVATKEAL 421
+ SV++I++KLKAAEERR+ LE SR + EQT+ FI AT++AL
Sbjct: 49 KNSMSVQDIEDKLKAAEERRQQLESNKIAALAAKMQKIEEASRKKDEQTSQFISATRDAL 108
Query: 422 DAKMETHEEKREAYINELRSRLKDHLEGVRR 514
+ KME H EKREAYI +L+++LKDH+E V +
Sbjct: 109 EQKMENHTEKREAYITDLKTKLKDHIENVEK 139
Score = 59.7 bits (138), Expect = 6e-08
Identities = 27/41 (65%), Positives = 36/41 (87%)
Frame = +1
Query: 511 KTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKMIERLRE 633
KTRL++EQQT EV AIE+K+ TA+ +RDEN+KKM+ERL+E
Sbjct: 139 KTRLSIEQQTDEVRSAIEEKLKTASVQRDENIKKMLERLKE 179
Score = 43.2 bits (97), Expect = 0.006
Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +3
Query: 111 VEAMEVETKSTEIRCQEMSKGGLAYEVILAEP-VGVPVPRRA 233
VE + TE+RCQE ++GGL YEVIL+EP V P++A
Sbjct: 4 VEVVVSSPDPTEVRCQEKTRGGLRYEVILSEPEVKATPPKKA 45
>UniRef50_Q8IPK0 Cluster: CG31641-PB, isoform B; n=10; Diptera|Rep:
CG31641-PB, isoform B - Drosophila melanogaster (Fruit
fly)
Length = 302
Score = 79.8 bits (188), Expect = 5e-14
Identities = 41/90 (45%), Positives = 56/90 (62%)
Frame = +2
Query: 245 KDSSVEEIQEKLKAAEERRRSLEXXXXXXXXXXXXXXXXXSRIRSEQTNNFIVATKEALD 424
K+ SVEEI++KLKAAEERR SLE +R + E TN FI TKE L+
Sbjct: 92 KNVSVEEIEQKLKAAEERRISLEAKKMADISTKLAKVEEATRKKDEITNEFITQTKEQLE 151
Query: 425 AKMETHEEKREAYINELRSRLKDHLEGVRR 514
+KME H EKREA I++++ +LK H + + +
Sbjct: 152 SKMELHVEKREAIISDMKEKLKIHAQDIEK 181
Score = 52.8 bits (121), Expect = 7e-06
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = +1
Query: 511 KTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKMIERLRE 633
KTR TLEQQ A KAIE+K+ A RDEN+KKM++RL+E
Sbjct: 181 KTRETLEQQKANEQKAIEEKLKIAQSLRDENIKKMLDRLKE 221
Score = 49.2 bits (112), Expect = 9e-05
Identities = 24/37 (64%), Positives = 30/37 (81%), Gaps = 1/37 (2%)
Frame = +3
Query: 123 EVETKSTEIRCQEMSKGGLAYEVILAEPV-GVPVPRR 230
+V+ +TEIRCQE S+GGL+YEVILAEP V VP+R
Sbjct: 50 KVKFITTEIRCQEKSRGGLSYEVILAEPAPNVAVPKR 86
>UniRef50_Q568Y8 Cluster: Stmn4 protein; n=9; Mammalia|Rep: Stmn4
protein - Rattus norvegicus (Rat)
Length = 203
Score = 60.5 bits (140), Expect = 3e-08
Identities = 33/84 (39%), Positives = 48/84 (57%)
Frame = +2
Query: 242 RKDSSVEEIQEKLKAAEERRRSLEXXXXXXXXXXXXXXXXXSRIRSEQTNNFIVATKEAL 421
R+D S+EEIQ+KL+AAEERR+ E + E+ NNFI KE L
Sbjct: 113 RRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKEKL 172
Query: 422 DAKMETHEEKREAYINELRSRLKD 493
KME+++E REA++ + RL++
Sbjct: 173 AQKMESNKENREAHLAAMLERLQE 196
>UniRef50_UPI00005A4639 Cluster: PREDICTED: similar to Stathmin 3
(SCG10-like protein) (SCG10-related protein HiAT3)
(Hippocampus abundant transcript 3); n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to Stathmin 3
(SCG10-like protein) (SCG10-related protein HiAT3)
(Hippocampus abundant transcript 3) - Canis familiaris
Length = 284
Score = 59.3 bits (137), Expect = 8e-08
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Frame = +2
Query: 242 RKDSSVEEIQEKLKAAEERRRSLEXXXXXXXXXXXXXXXXXSRIRSEQTNNFIVATKEAL 421
RKD+S+EE+Q++L+AAEERR++ E E NNF +E L
Sbjct: 181 RKDTSLEELQKRLEAAEERRKTQEAQVLKQLAERREHEREVLHKALEDNNNFSRLAEEKL 240
Query: 422 DAKMETHEEKREAYINELRSRLKD---HLEGVRR 514
+ KME +E REA++ LR RL++ H VRR
Sbjct: 241 NHKMELSKEIREAHLAALRERLREKELHAAEVRR 274
>UniRef50_Q9NZ72 Cluster: Stathmin-3; n=57; Euteleostomi|Rep:
Stathmin-3 - Homo sapiens (Human)
Length = 180
Score = 58.8 bits (136), Expect = 1e-07
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Frame = +2
Query: 242 RKDSSVEEIQEKLKAAEERRRSLEXXXXXXXXXXXXXXXXXSRIRSEQTNNFIVATKEAL 421
+KD+S+EE+Q++L+AAEERR++ E E+ NNF +E L
Sbjct: 77 KKDTSLEELQKRLEAAEERRKTQEAQVLKQLAERREHEREVLHKALEENNNFSRQAEEKL 136
Query: 422 DAKMETHEEKREAYINELRSRLKD---HLEGVRR 514
+ KME +E REA++ LR RL++ H VRR
Sbjct: 137 NYKMELSKEIREAHLAALRERLREKELHAAEVRR 170
>UniRef50_P16949 Cluster: Stathmin; n=70; Euteleostomi|Rep: Stathmin
- Homo sapiens (Human)
Length = 149
Score = 58.4 bits (135), Expect = 1e-07
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Frame = +2
Query: 242 RKDSSVEEIQEKLKAAEERRRSLEXXXXXXXXXXXXXXXXXSRIRSEQTNNFIVATKEAL 421
+KD S+EEIQ+KL+AAEERR+S E + E+ NNF +E L
Sbjct: 42 KKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEKREHEKEVLQKAIEENNNFSKMAEEKL 101
Query: 422 DAKMETHEEKREAYINELRSRLKD---HLEGVRR 514
KME ++E REA + RL++ H+E VR+
Sbjct: 102 THKMEANKENREAQMAAKLERLREKDKHIEEVRK 135
>UniRef50_UPI0000F1E5FC Cluster: PREDICTED: similar to stathmin-like
3,; n=1; Danio rerio|Rep: PREDICTED: similar to
stathmin-like 3, - Danio rerio
Length = 242
Score = 50.4 bits (115), Expect = 4e-05
Identities = 30/84 (35%), Positives = 42/84 (50%)
Frame = +2
Query: 242 RKDSSVEEIQEKLKAAEERRRSLEXXXXXXXXXXXXXXXXXSRIRSEQTNNFIVATKEAL 421
RK+ S+ E+Q +L+AAE RRRS E E NN+ T+E L
Sbjct: 141 RKEPSLGELQRRLEAAEARRRSQEKQVLKQLAEKREREKEVLTKAQEVNNNYSKKTEEKL 200
Query: 422 DAKMETHEEKREAYINELRSRLKD 493
+ KME E R A +N L+ RL++
Sbjct: 201 NHKMEMITENRMARLNALKQRLRE 224
>UniRef50_UPI000065DE94 Cluster: Stathmin-2 (SCG10 protein)
(Superior cervical ganglion-10 protein).; n=1; Takifugu
rubripes|Rep: Stathmin-2 (SCG10 protein) (Superior
cervical ganglion-10 protein). - Takifugu rubripes
Length = 207
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/84 (29%), Positives = 44/84 (52%)
Frame = +2
Query: 242 RKDSSVEEIQEKLKAAEERRRSLEXXXXXXXXXXXXXXXXXSRIRSEQTNNFIVATKEAL 421
++D S+E+I++KL+AAE+RRR E E+ +NF +E L
Sbjct: 107 KRDISLEDIEKKLEAAEDRRRYQEAQVMRALAEKREHERDVLLKAMEENSNFSKMAEEKL 166
Query: 422 DAKMETHEEKREAYINELRSRLKD 493
KM+ +E R+A++ + RL++
Sbjct: 167 QMKMDQIKENRDAHLAAMLERLQE 190
>UniRef50_P21561 Cluster: Uncharacterized 50.6 kDa protein in the
5'region of gyrA and gyrB; n=1; Haloferax
lucentense|Rep: Uncharacterized 50.6 kDa protein in the
5'region of gyrA and gyrB - Haloferax sp. (strain Aa
2.2)
Length = 437
Score = 37.9 bits (84), Expect = 0.21
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = +1
Query: 325 GRHCSEDGQDRGGVPHPQRADE*LHRRHQGGARRQDGDPRGKTRGLHQR 471
GRH S+ QD G P QR E RH G RR+ RG++RG H+R
Sbjct: 141 GRHASDRVQD-GAHPRRQRLRE--QPRHAGRPRRRQPPRRGRSRGTHRR 186
>UniRef50_A3TUV5 Cluster: Putative uncharacterized protein; n=3;
Alphaproteobacteria|Rep: Putative uncharacterized
protein - Oceanicola batsensis HTCC2597
Length = 620
Score = 37.1 bits (82), Expect = 0.37
Identities = 23/48 (47%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 343 DGQDRGGVPHPQRADE*LHRRHQGGARRQDGDPRGKT--RGLHQRAAL 480
DG DRG P R D LHR H GG RR RG T + H RA L
Sbjct: 176 DGLDRGDRPVLGRGDPFLHRAHVGGQRRLVAHGRGNTTQKRRHLRARL 223
>UniRef50_Q2QUC0 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 272
Score = 36.3 bits (80), Expect = 0.64
Identities = 26/77 (33%), Positives = 38/77 (49%)
Frame = +1
Query: 241 PKRLLRRRDPREAEGSRREET*LGS**DGRHCSEDGQDRGGVPHPQRADE*LHRRHQGGA 420
P RL R R+ +G+ + +G + R G++ G P RA+ RRH GGA
Sbjct: 154 PLRLERGRERMREKGNEDDRVAVGERREERGSGVGGEEEAGAP-AARAERRGRRRH-GGA 211
Query: 421 RRQDGDPRGKTRGLHQR 471
R+DG RG RG ++
Sbjct: 212 AREDG-RRGGERGARRQ 227
>UniRef50_UPI0000D9C5D4 Cluster: PREDICTED: similar to
SCG10-like-protein; n=2; Catarrhini|Rep: PREDICTED:
similar to SCG10-like-protein - Macaca mulatta
Length = 116
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/23 (60%), Positives = 22/23 (95%)
Frame = +2
Query: 242 RKDSSVEEIQEKLKAAEERRRSL 310
+KD+S+EE+Q++L+AAEERR+ L
Sbjct: 77 KKDTSLEELQKRLEAAEERRKEL 99
>UniRef50_Q5GRS5 Cluster: DNA recombination protein rmuC homolog;
n=6; Wolbachia|Rep: DNA recombination protein rmuC
homolog - Wolbachia sp. subsp. Brugia malayi (strain
TRS)
Length = 449
Score = 34.7 bits (76), Expect = 2.0
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = +2
Query: 281 KAAEERRRSLEXXXXXXXXXXXXXXXXXSRIRSEQTNNFIVATKEALDAKM---ETHEEK 451
K EE+++ +E NNF+ KE +D+K+ E++ +K
Sbjct: 77 KEREEKKKEIELLAKAEERLTNTFKALSLDALQTNNNNFLNLAKEVIDSKLKETESNFKK 136
Query: 452 REAYINELRSRLKDHLE 502
R+A INE+ + +K+ LE
Sbjct: 137 RQATINEVVTPIKEKLE 153
>UniRef50_A6GDU2 Cluster: Sensor protein; n=1; Plesiocystis pacifica
SIR-1|Rep: Sensor protein - Plesiocystis pacifica SIR-1
Length = 373
Score = 33.9 bits (74), Expect = 3.4
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +3
Query: 81 QLFRSLCRLKVEAMEVETKSTEIRCQEMSKGGLAYEVILAEPVGVP 218
Q+F +LC+ +EAM + +R Q +GG+ +VI E VGVP
Sbjct: 259 QVFLNLCKNALEAMHERGEVLRLRAQATEEGGVRVDVI-DEGVGVP 303
>UniRef50_A5NZZ8 Cluster: LigA; n=1; Methylobacterium sp. 4-46|Rep:
LigA - Methylobacterium sp. 4-46
Length = 962
Score = 33.5 bits (73), Expect = 4.5
Identities = 27/88 (30%), Positives = 32/88 (36%), Gaps = 1/88 (1%)
Frame = +1
Query: 232 PTHPKRLLRRRDPREAEGSRREET*LGS**DGRHCSEDGQDRGGVP-HPQRADE*LHRRH 408
P H RRR R RR + G G C+ G H A+ HRRH
Sbjct: 611 PPHRPDPARRRPRRLHPRGRRRDARPGQLDQGGRCAGGRAGAAGEGRHGAGAEPAAHRRH 670
Query: 409 QGGARRQDGDPRGKTRGLHQRAALPSQG 492
G DG P + RG + A P G
Sbjct: 671 PGAEPPGDGRPPQRARGPCRAAGRPLPG 698
>UniRef50_A5KAV8 Cluster: Merozoite surface protein 3 (MSP3),
putative; n=2; Plasmodium vivax|Rep: Merozoite surface
protein 3 (MSP3), putative - Plasmodium vivax
Length = 1243
Score = 33.5 bits (73), Expect = 4.5
Identities = 23/72 (31%), Positives = 31/72 (43%)
Frame = +2
Query: 245 KDSSVEEIQEKLKAAEERRRSLEXXXXXXXXXXXXXXXXXSRIRSEQTNNFIVATKEALD 424
K +VEE Q+ K AEE+ ++ +I +E T A K+A D
Sbjct: 251 KTRAVEEAQQIAKQAEEQLKTATKATQEAAQAAQAAQDEAKKI-TENTEKIEEAVKQATD 309
Query: 425 AKMETHEEKREA 460
AK E E REA
Sbjct: 310 AKEEAENESREA 321
>UniRef50_UPI0000EBD517 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 214
Score = 28.7 bits (61), Expect(2) = 5.5
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +1
Query: 403 RHQGGARR--QDGDPRGKTRGLHQRAALPSQGSS 498
R GGA+ Q+G RG+ RG H R A P +G +
Sbjct: 176 RGGGGAKPGLQEGRGRGRGRGRHSRPASPPRGGA 209
Score = 23.4 bits (48), Expect(2) = 5.5
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 358 GGVPHPQRADE*LHRRHQGGA 420
GGVP P+ A + H R GA
Sbjct: 121 GGVPGPEGAQQRAHWRRPAGA 141
>UniRef50_Q76B35 Cluster: Gag-like protein; n=2; Takifugu
rubripes|Rep: Gag-like protein - Fugu rubripes (Japanese
pufferfish) (Takifugu rubripes)
Length = 420
Score = 33.1 bits (72), Expect = 6.0
Identities = 22/49 (44%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +1
Query: 325 GRHCSEDGQDRGGVPHPQRADE*LHRRHQ--GGARRQDGDPRGKTRGLH 465
G SE GQ G PHP AD L R HQ G R D TR LH
Sbjct: 273 GEESSEVGQREGPGPHPVEADMELGRSHQADSGVRPASTDD-DSTRSLH 320
>UniRef50_Q6MQR4 Cluster: Putative periplasmic protein TonB; n=1;
Bdellovibrio bacteriovorus|Rep: Putative periplasmic
protein TonB - Bdellovibrio bacteriovorus
Length = 316
Score = 33.1 bits (72), Expect = 6.0
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 377 SEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEG 505
+ Q+N++I + L+ + T E K +Y N +R +L H EG
Sbjct: 185 ASQSNDYIKDVEVGLETLLNTREFKYYSYYNRIRKQLSQHWEG 227
>UniRef50_A7SA31 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 302
Score = 32.7 bits (71), Expect = 7.9
Identities = 20/78 (25%), Positives = 34/78 (43%)
Frame = +2
Query: 260 EEIQEKLKAAEERRRSLEXXXXXXXXXXXXXXXXXSRIRSEQTNNFIVATKEALDAKMET 439
E++Q+K A++E L I EQ +E + KME
Sbjct: 152 EKLQQKFAASKEIIEELRSAKEEKLQAHERRVRVAQSIAQEQIEQQSKLIEEKIMQKMEM 211
Query: 440 HEEKREAYINELRSRLKD 493
+EKR++Y+ L++RL +
Sbjct: 212 TKEKRDSYMEALKTRLHE 229
>UniRef50_Q8ZVZ9 Cluster: P. aerophilum family 417, putative ATP
binding; n=4; Pyrobaculum|Rep: P. aerophilum family 417,
putative ATP binding - Pyrobaculum aerophilum
Length = 391
Score = 32.7 bits (71), Expect = 7.9
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +2
Query: 449 KREAYINELRSRLKDHLEGVRRPG*PWNSRPR--KCTRPSKIR 571
+R A+ E+ L +H+ GVRRPG +NSR C P +R
Sbjct: 198 RRVAFSEEVAKSLGEHMPGVRRPGLLYNSRVAVYLCDHPKCLR 240
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 485,737,492
Number of Sequences: 1657284
Number of extensions: 8237803
Number of successful extensions: 32081
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 30547
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32042
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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