Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20024
         (685 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    29   0.14 
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            24   5.1  
AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    24   5.1  
CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline...    23   6.8  
AY748831-1|AAV28179.1|   24|Anopheles gambiae cytochrome P450 pr...    23   6.8  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   6.8  
AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1 prot...    23   9.0  
AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A prot...    23   9.0  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   9.0  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 29.1 bits (62), Expect = 0.14
 Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
 Frame = +1

Query: 352 QAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQ-QSLLQDLSTEDKQ 528
           Q  +Q+   RPQ  RP + +    R  QR+  +  L+EV P  G+  +SLL  + T    
Sbjct: 463 QQPQQQQQQRPQQQRPQQQRPQQQRSQQRKPAKPELIEVSPNEGQDWESLLLLVQTA--- 519

Query: 529 YLKLDNTKGSSDDRIIYGDSTA 594
            ++ D       D ++ G  T+
Sbjct: 520 -VRTDERYKPLKDHVVLGRRTS 540



 Score = 23.4 bits (48), Expect = 6.8
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 242 QEEHLDFAYQLWTKDGKEIVKSYFPIQ 322
           Q + +   YQLW + G  +V    PI+
Sbjct: 6   QPQQVSAPYQLWPRKGSVVVMQPQPIE 32


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = +2

Query: 392  IDQQNHNKI--AFGDSKDKTSKKVSWKFTPVLENNRVYFKIC 511
            ID+   +K+  AF     K    V+ +  P+LEN    +K+C
Sbjct: 1075 IDKNERDKLFDAFISYSSKDEAFVAEELAPMLENEDPSYKLC 1116


>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +2

Query: 77  LTPHLHQELMTYWR 118
           L P  HQE MT WR
Sbjct: 100 LAPMSHQETMTLWR 113


>CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline
           phosphatase protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 84  GVRSQRTHGEDEGKQSQSH 28
           G+R +RT GED  K  Q H
Sbjct: 284 GIRGRRTDGEDLIKHWQHH 302


>AY748831-1|AAV28179.1|   24|Anopheles gambiae cytochrome P450
           protein.
          Length = 24

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 467 FTPVLENNRVYFKICPPRTN 526
           FTP+     +Y ++ P RTN
Sbjct: 5   FTPLRSEKGIYLQLSPRRTN 24


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 126 YMSVVIGEYETAIAKCSEYLKEKKGEV 206
           YM  +I + E    +C + LKEK  +V
Sbjct: 550 YMEAIIVDTEKTARRCIQILKEKMLDV 576


>AY750997-1|AAV31069.1|  153|Anopheles gambiae peritrophin-1
           protein.
          Length = 153

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 426 VTPKTKPARKSPGSLPP 476
           VTP T+PA K   + PP
Sbjct: 81  VTPNTEPASKPSPNCPP 97


>AY344823-1|AAR02434.1|  153|Anopheles gambiae peritrophin A
           protein.
          Length = 153

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 426 VTPKTKPARKSPGSLPP 476
           VTP T+PA K   + PP
Sbjct: 81  VTPNTEPASKPSPNCPP 97


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 244 RGTPGLRLPVMDKGWKGNR 300
           +G PGLR P  ++G  G+R
Sbjct: 109 KGNPGLRGPKGERGGMGDR 127


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 707,858
Number of Sequences: 2352
Number of extensions: 15196
Number of successful extensions: 57
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)