Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20024
         (685 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC084579-1|AAH84579.1|  343|Homo sapiens chromosome 18 open read...    34   0.41 
AL832027-1|CAD89920.1|  312|Homo sapiens hypothetical protein pr...    34   0.41 
AL713661-1|CAD28470.1|  196|Homo sapiens hypothetical protein pr...    34   0.41 

>BC084579-1|AAH84579.1|  343|Homo sapiens chromosome 18 open reading
           frame 25 protein.
          Length = 343

 Score = 34.3 bits (75), Expect = 0.41
 Identities = 19/54 (35%), Positives = 26/54 (48%)
 Frame = +1

Query: 484 KQQSLLQDLSTEDKQYLKLDNTKGSSDDRIIYGDSTADTFKHHWYLEPSMYESD 645
           K+ +LLQD ST D       +T  S DD  + G S   T +   +L+P    SD
Sbjct: 196 KKYNLLQDSSTSDSDLTCDSSTSSSDDDEEVSGSSKTITAEIPGHLDPGFLASD 249


>AL832027-1|CAD89920.1|  312|Homo sapiens hypothetical protein
           protein.
          Length = 312

 Score = 34.3 bits (75), Expect = 0.41
 Identities = 19/54 (35%), Positives = 26/54 (48%)
 Frame = +1

Query: 484 KQQSLLQDLSTEDKQYLKLDNTKGSSDDRIIYGDSTADTFKHHWYLEPSMYESD 645
           K+ +LLQD ST D       +T  S DD  + G S   T +   +L+P    SD
Sbjct: 165 KKYNLLQDSSTSDSDLTCDSSTSSSDDDEEVSGSSKTVTAEIPGHLDPGFLASD 218


>AL713661-1|CAD28470.1|  196|Homo sapiens hypothetical protein
           protein.
          Length = 196

 Score = 34.3 bits (75), Expect = 0.41
 Identities = 19/54 (35%), Positives = 26/54 (48%)
 Frame = +1

Query: 484 KQQSLLQDLSTEDKQYLKLDNTKGSSDDRIIYGDSTADTFKHHWYLEPSMYESD 645
           K+ +LLQD ST D       +T  S DD  + G S   T +   +L+P    SD
Sbjct: 49  KKYNLLQDSSTSDSDLTCDSSTSSSDDDEEVSGSSKTITAEIPGHLDPGFLASD 102


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,118,564
Number of Sequences: 237096
Number of extensions: 2254356
Number of successful extensions: 6134
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6134
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)