Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20022
(669 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC024176-1|AAH24176.1| 399|Homo sapiens ZNF302 protein protein. 31 4.9
AK074901-1|BAC11279.1| 399|Homo sapiens protein ( Homo sapiens ... 31 4.9
AF326206-1|AAK11224.1| 399|Homo sapiens ZNF140-like transcripti... 31 4.9
AF265236-1|AAF74775.1| 478|Homo sapiens ZNF135-like protein pro... 31 4.9
AF155656-1|AAF67475.1| 411|Homo sapiens zinc finger protein ZNF... 31 4.9
BC110517-1|AAI10518.1| 320|Homo sapiens ZDHHC20 protein protein. 30 8.6
BC067898-1|AAH67898.1| 130|Homo sapiens ZDHHC20 protein protein. 30 8.6
BC050367-1|AAH50367.2| 354|Homo sapiens zinc finger, DHHC-type ... 30 8.6
BC034944-1|AAH34944.1| 130|Homo sapiens ZDHHC20 protein protein. 30 8.6
AL136219-3|CAH70596.1| 365|Homo sapiens protein ( Human DNA seq... 30 8.6
AK074487-1|BAC11018.1| 123|Homo sapiens protein ( Homo sapiens ... 30 8.6
AK023167-1|BAB14441.1| 236|Homo sapiens ohydrolase (EC 1.5.1.15... 30 8.6
>BC024176-1|AAH24176.1| 399|Homo sapiens ZNF302 protein protein.
Length = 399
Score = 30.7 bits (66), Expect = 4.9
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -3
Query: 667 EQDVVXRTWRAGRTIAPWCCQRCCRRIQHGSRLLQLQV 554
+Q ++ R WR P+ C+ C + HGS L + Q+
Sbjct: 212 KQSILSRHWRIHTGEKPYECRECGKTFSHGSSLTRHQI 249
>AK074901-1|BAC11279.1| 399|Homo sapiens protein ( Homo sapiens
cDNA FLJ90420 fis, clone NT2RP3000232, weakly similar to
ZINC FINGER PROTEIN 184. ).
Length = 399
Score = 30.7 bits (66), Expect = 4.9
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -3
Query: 667 EQDVVXRTWRAGRTIAPWCCQRCCRRIQHGSRLLQLQV 554
+Q ++ R WR P+ C+ C + HGS L + Q+
Sbjct: 212 KQSILSRHWRIHTGEKPYECRECGKTFSHGSSLTRHQI 249
>AF326206-1|AAK11224.1| 399|Homo sapiens ZNF140-like transcription
factor protein.
Length = 399
Score = 30.7 bits (66), Expect = 4.9
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -3
Query: 667 EQDVVXRTWRAGRTIAPWCCQRCCRRIQHGSRLLQLQV 554
+Q ++ R WR P+ C+ C + HGS L + Q+
Sbjct: 212 KQSILSRHWRIHTGEKPYECRECGKTFSHGSSLTRHQI 249
>AF265236-1|AAF74775.1| 478|Homo sapiens ZNF135-like protein
protein.
Length = 478
Score = 30.7 bits (66), Expect = 4.9
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -3
Query: 667 EQDVVXRTWRAGRTIAPWCCQRCCRRIQHGSRLLQLQV 554
+Q ++ R WR P+ C+ C + HGS L + Q+
Sbjct: 291 KQSILSRHWRIHTGEKPYECRECGKTFSHGSSLTRHQI 328
>AF155656-1|AAF67475.1| 411|Homo sapiens zinc finger protein
ZNF140-like protein protein.
Length = 411
Score = 30.7 bits (66), Expect = 4.9
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -3
Query: 667 EQDVVXRTWRAGRTIAPWCCQRCCRRIQHGSRLLQLQV 554
+Q ++ R WR P+ C+ C + HGS L + Q+
Sbjct: 212 KQSILSRHWRIHTGEKPYECRECGKTFSHGSSLTRHQI 249
>BC110517-1|AAI10518.1| 320|Homo sapiens ZDHHC20 protein protein.
Length = 320
Score = 29.9 bits (64), Expect = 8.6
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 625 IAPWCCQRCCRRIQHGSRLLQLQVVVLIFKYWLYLV 518
+APW RCC+R+ +L + VV ++ Y+ Y+V
Sbjct: 1 MAPWTLWRCCQRVVGWVPVLFITFVV-VWSYYAYVV 35
>BC067898-1|AAH67898.1| 130|Homo sapiens ZDHHC20 protein protein.
Length = 130
Score = 29.9 bits (64), Expect = 8.6
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 625 IAPWCCQRCCRRIQHGSRLLQLQVVVLIFKYWLYLV 518
+APW RCC+R+ +L + VV ++ Y+ Y+V
Sbjct: 1 MAPWTLWRCCQRVVGWVPVLFITFVV-VWSYYAYVV 35
>BC050367-1|AAH50367.2| 354|Homo sapiens zinc finger, DHHC-type
containing 20 protein.
Length = 354
Score = 29.9 bits (64), Expect = 8.6
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 625 IAPWCCQRCCRRIQHGSRLLQLQVVVLIFKYWLYLV 518
+APW RCC+R+ +L + VV ++ Y+ Y+V
Sbjct: 1 MAPWTLWRCCQRVVGWVPVLFITFVV-VWSYYAYVV 35
>BC034944-1|AAH34944.1| 130|Homo sapiens ZDHHC20 protein protein.
Length = 130
Score = 29.9 bits (64), Expect = 8.6
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 625 IAPWCCQRCCRRIQHGSRLLQLQVVVLIFKYWLYLV 518
+APW RCC+R+ +L + VV ++ Y+ Y+V
Sbjct: 1 MAPWTLWRCCQRVVGWVPVLFITFVV-VWSYYAYVV 35
>AL136219-3|CAH70596.1| 365|Homo sapiens protein ( Human DNA
sequence from clone RP11-149B7 on chromosome 13 Contains
aglyceraldehyde-3-phosphate dehydrogenase (GAPD)(GAPDH)
pseudogene, 2rase (TD).
Length = 365
Score = 29.9 bits (64), Expect = 8.6
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 625 IAPWCCQRCCRRIQHGSRLLQLQVVVLIFKYWLYLV 518
+APW RCC+R+ +L + VV ++ Y+ Y+V
Sbjct: 1 MAPWTLWRCCQRVVGWVPVLFITFVV-VWSYYAYVV 35
>AK074487-1|BAC11018.1| 123|Homo sapiens protein ( Homo sapiens
cDNA FLJ90006 fis, clone HEMBA1000121. ).
Length = 123
Score = 29.9 bits (64), Expect = 8.6
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 625 IAPWCCQRCCRRIQHGSRLLQLQVVVLIFKYWLYLV 518
+APW RCC+R+ +L + VV ++ Y+ Y+V
Sbjct: 1 MAPWTLWRCCQRVVGWVPVLFITFVV-VWSYYAYVV 35
>AK023167-1|BAB14441.1| 236|Homo sapiens ohydrolase (EC 1.5.1.15).
protein.
Length = 236
Score = 29.9 bits (64), Expect = 8.6
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 625 IAPWCCQRCCRRIQHGSRLLQLQVVVLIFKYWLYLV 518
+APW RCC+R+ +L + VV ++ Y+ Y+V
Sbjct: 1 MAPWTLWRCCQRVVGWVPVLFITFVV-VWSYYAYVV 35
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,125,215
Number of Sequences: 237096
Number of extensions: 1989867
Number of successful extensions: 7886
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7886
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -