Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20022
         (669 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    26   0.37 
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                23   2.0  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   2.6  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    22   4.6  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   6.1  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   8.0  

>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
 Frame = +2

Query: 38  VFAMCMLAASAGVVELSADTSNQDLEEKLYNS----ILTGDYDSAVRQSLEYESQGKGSI 205
           +FA CM   ++  +++  D     + + L  S    I++ D+D +     EY +  +   
Sbjct: 37  LFARCMGGINSRNMDIEHDPGLAAVLQYLIRSGQLNIISSDHDDSDE---EYAANSQPPR 93

Query: 206 IQNVVNNLIIDKRRNTRSTATSCG--SATDRKLLESTS 313
           I +V N   +DK   + +T  +CG     D++ L  TS
Sbjct: 94  ITSVPNTSRLDKSEISLATKQACGFIDNIDKRNLSVTS 131


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
 Frame = +1

Query: 241 ETEHQEYCYKLWVGNGQEIVRKYFPLNFRLIMA----GNYVKIIYRNYNLALKLGSTTNP 408
           ET++Q   + +   N Q+I++  FP+     +     G   K +Y+   +A K+  T   
Sbjct: 42  ETKNQLSPFNIDTPNRQKILKDGFPIKCGTFLGSGGFGIVYKALYKGEQVAAKIIQTEKY 101

Query: 409 SN 414
           SN
Sbjct: 102 SN 103


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -1

Query: 90  ADSSTTPALAASMHIANTTRSFILLGAFQI 1
           A+   +  +A  +HI+N T SF L G F++
Sbjct: 396 ANKMESSGMAGRVHISNATLSF-LNGEFEV 424


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -2

Query: 326 LKFNGKYFLTISCPL-PTHSL*QYSWCSVSC 237
           ++F G Y + I   +    S  ++ WC+VSC
Sbjct: 373 VEFPGXYTMVIGSGVYRIGSSVEFDWCAVSC 403


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -3

Query: 298 QFPVRCRPTACSSTPGVPSLVNDQVVNYILDD 203
           QF   C P+      GVP+ V     + + DD
Sbjct: 389 QFATPCTPSPPRGPGGVPTSVIQAATSSVSDD 420


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 298 QFPVRCRPTACSSTPGVPS 242
           +F  R    ACS+T GVPS
Sbjct: 579 EFYKRRPQRACSTTGGVPS 597


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,416
Number of Sequences: 438
Number of extensions: 4016
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)