Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20021
         (716 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28971-8|AAD31046.2|  767|Caenorhabditis elegans Related to isle...    30   1.9  
AJ245560-1|CAB52188.1|  767|Caenorhabditis elegans IDA-1 protein...    30   1.9  
AF126740-1|AAK14908.1|  767|Caenorhabditis elegans IA2 protein.        30   1.9  
Z81517-3|CAB04210.1|  802|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AF045639-8|AAC02566.1|  649|Caenorhabditis elegans Hypothetical ...    29   3.3  
Z82082-4|CAE45093.1|  210|Caenorhabditis elegans Hypothetical pr...    28   5.8  
AF047657-3|AAK18947.2|  326|Caenorhabditis elegans Serpentine re...    28   5.8  
AF016421-11|AAM45373.2|  417|Caenorhabditis elegans Hypothetical...    28   7.7  

>U28971-8|AAD31046.2|  767|Caenorhabditis elegans Related to islet
           cell diabetesautoantigen protein 1 protein.
          Length = 767

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 9/22 (40%), Positives = 18/22 (81%)
 Frame = -1

Query: 164 YKLNLVTDHVWFANYLPRVFYI 99
           ++++LV++H+W  +YL R FY+
Sbjct: 622 FEIHLVSEHIWSDDYLVRSFYL 643


>AJ245560-1|CAB52188.1|  767|Caenorhabditis elegans IDA-1 protein
           protein.
          Length = 767

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 9/22 (40%), Positives = 18/22 (81%)
 Frame = -1

Query: 164 YKLNLVTDHVWFANYLPRVFYI 99
           ++++LV++H+W  +YL R FY+
Sbjct: 622 FEIHLVSEHIWSDDYLVRSFYL 643


>AF126740-1|AAK14908.1|  767|Caenorhabditis elegans IA2 protein.
          Length = 767

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 9/22 (40%), Positives = 18/22 (81%)
 Frame = -1

Query: 164 YKLNLVTDHVWFANYLPRVFYI 99
           ++++LV++H+W  +YL R FY+
Sbjct: 622 FEIHLVSEHIWSDDYLVRSFYL 643


>Z81517-3|CAB04210.1|  802|Caenorhabditis elegans Hypothetical
           protein F28B1.3 protein.
          Length = 802

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 16/58 (27%), Positives = 28/58 (48%)
 Frame = +2

Query: 221 GLNIFIINISIQGSFRISYIVYNCALCPNCNVT*TFVCTLINVFVTSLSWLHIVFSTI 394
           G  +++  +S  G  R+ Y++ NC     C  T TFV   +N +   L W+  +  T+
Sbjct: 280 GSGVYMDRVSTDG--RLKYLIDNCTSEFVCGDTDTFVVFNMNHYPLVLRWIDNIMVTM 335


>AF045639-8|AAC02566.1|  649|Caenorhabditis elegans Hypothetical
           protein B0212.1 protein.
          Length = 649

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
 Frame = +2

Query: 152 DSIYS*AEFVKMCLVNLSTFCSAGLNIFIINISIQGSFRISYIVYNCALCPNCNVT*TF- 328
           DS+ S A  V+    +  +  S  L +  +   + G    +++V+ C L PNC+   T  
Sbjct: 178 DSLSSAAATVRKVTHSSPSAGSLFLRLGSVVFGVTGVVYYAFLVFLCELDPNCSALSTSL 237

Query: 329 -VCTLINVFVTSLSWLHIVF 385
            VC ++ +F+     +H +F
Sbjct: 238 DVCAILFIFIQ----MHFIF 253


>Z82082-4|CAE45093.1|  210|Caenorhabditis elegans Hypothetical
           protein ZC334.7 protein.
          Length = 210

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = -1

Query: 131 FANYLPRVFYIMTFAYCGYLDKRKQSYANMSYKLLMCL 18
           +  Y P       ++Y GY++++ + Y  M Y L+ C+
Sbjct: 90  YGGYRPNPPQPFGYSYVGYINRQARRYPVMMYTLIQCV 127


>AF047657-3|AAK18947.2|  326|Caenorhabditis elegans Serpentine
           receptor, class h protein272 protein.
          Length = 326

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -1

Query: 101 IMTFAYCGYLDKRKQSYANMSYKLLMC 21
           ++ FAY  Y D   Q+Y N+S+ ++ C
Sbjct: 252 LLYFAYSVYFDSYNQAYNNISFIIISC 278


>AF016421-11|AAM45373.2|  417|Caenorhabditis elegans Hypothetical
           protein F44E7.8 protein.
          Length = 417

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
 Frame = +2

Query: 578 SITTCHIIWSFIKKDTQGGYLEQGHKYTA-LKLQKHGIYVPMYVM 709
           S   C IIW    K  QG  L+ G K+   +    H  Y+  Y M
Sbjct: 324 SYMLCQIIWHIAGKTLQGDILDAGEKFIGKIADDLHQYYLKEYKM 368


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,971,401
Number of Sequences: 27780
Number of extensions: 399666
Number of successful extensions: 911
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)