Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20020
         (688 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094796-1|AAM11149.1|  396|Drosophila melanogaster LD22815p pro...   144   8e-35
AE013599-2215|AAF58045.2|  396|Drosophila melanogaster CG8446-PA...   144   8e-35
AE014297-490|AAS65117.1| 2098|Drosophila melanogaster CG17603-PC...    29   6.0  
AE014297-489|AAS65116.1| 2129|Drosophila melanogaster CG17603-PB...    29   6.0  

>AY094796-1|AAM11149.1|  396|Drosophila melanogaster LD22815p
           protein.
          Length = 396

 Score =  144 bits (350), Expect = 8e-35
 Identities = 62/85 (72%), Positives = 73/85 (85%)
 Frame = +1

Query: 1   EITKSVFMSQSTDIYTNLALEDWLYKNMDFTNHHVMMVWRNEPCVVIGRHQNPWLEANVP 180
           EI KSVF+SQS+D++TNLALEDWLYKN DF+ HHV+++W N+PCVVIGRHQNP+ EANV 
Sbjct: 55  EIKKSVFISQSSDVFTNLALEDWLYKNFDFSRHHVLLLWANDPCVVIGRHQNPFTEANVS 114

Query: 181 LLSEKEIALARRNSGGGTVYHDRGN 255
            L E+ I LARRNSGGG VYHD GN
Sbjct: 115 QLVERGITLARRNSGGGAVYHDLGN 139



 Score =  107 bits (257), Expect = 1e-23
 Identities = 48/82 (58%), Positives = 62/82 (75%)
 Frame = +3

Query: 255 LNITFFAPREXYDRNYNLKLIKRALFRSFGIKSTINERQDLIVRDKYKVSGTAAKLGRLT 434
           LN TFF+PRE YDR YNL ++ RALFR + IK+ INER D++V +K K+SGTAAKLG   
Sbjct: 140 LNCTFFSPRERYDRKYNLNIVTRALFREWAIKAEINERDDIVVMNK-KISGTAAKLGHPN 198

Query: 435 GYHHCTLLVNANKADLSKALAK 500
            YHHCT+L +ANK  L ++L +
Sbjct: 199 SYHHCTILASANKLHLGESLVR 220



 Score = 52.8 bits (121), Expect = 4e-07
 Identities = 24/47 (51%), Positives = 33/47 (70%)
 Frame = +2

Query: 509 KATASTRSEVANLKDLDNRITVENLQTALGYEYLRTPALHLDDGGQS 649
           KATAS  S + NL D++  + V  L++A+GYEYLRT A  L+DGG +
Sbjct: 228 KATASVPSPIRNLVDVNRTVNVAQLRSAVGYEYLRTAATTLEDGGST 274


>AE013599-2215|AAF58045.2|  396|Drosophila melanogaster CG8446-PA
           protein.
          Length = 396

 Score =  144 bits (350), Expect = 8e-35
 Identities = 62/85 (72%), Positives = 73/85 (85%)
 Frame = +1

Query: 1   EITKSVFMSQSTDIYTNLALEDWLYKNMDFTNHHVMMVWRNEPCVVIGRHQNPWLEANVP 180
           EI KSVF+SQS+D++TNLALEDWLYKN DF+ HHV+++W N+PCVVIGRHQNP+ EANV 
Sbjct: 55  EIKKSVFISQSSDVFTNLALEDWLYKNFDFSRHHVLLLWANDPCVVIGRHQNPFTEANVS 114

Query: 181 LLSEKEIALARRNSGGGTVYHDRGN 255
            L E+ I LARRNSGGG VYHD GN
Sbjct: 115 QLVERGITLARRNSGGGAVYHDLGN 139



 Score =  107 bits (257), Expect = 1e-23
 Identities = 48/82 (58%), Positives = 62/82 (75%)
 Frame = +3

Query: 255 LNITFFAPREXYDRNYNLKLIKRALFRSFGIKSTINERQDLIVRDKYKVSGTAAKLGRLT 434
           LN TFF+PRE YDR YNL ++ RALFR + IK+ INER D++V +K K+SGTAAKLG   
Sbjct: 140 LNCTFFSPRERYDRKYNLNIVTRALFREWAIKAEINERDDIVVMNK-KISGTAAKLGHPN 198

Query: 435 GYHHCTLLVNANKADLSKALAK 500
            YHHCT+L +ANK  L ++L +
Sbjct: 199 SYHHCTILASANKLHLGESLVR 220



 Score = 52.8 bits (121), Expect = 4e-07
 Identities = 24/47 (51%), Positives = 33/47 (70%)
 Frame = +2

Query: 509 KATASTRSEVANLKDLDNRITVENLQTALGYEYLRTPALHLDDGGQS 649
           KATAS  S + NL D++  + V  L++A+GYEYLRT A  L+DGG +
Sbjct: 228 KATASVPSPIRNLVDVNRTVNVAQLRSAVGYEYLRTAATTLEDGGST 274


>AE014297-490|AAS65117.1| 2098|Drosophila melanogaster CG17603-PC,
            isoform C protein.
          Length = 2098

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
 Frame = +1

Query: 526  AIRSGQPEGPGQQNYGRESANSARLRIPSYSSSAP---GRRRPEPDS 657
            A+R   P GPG+   GR      R  +    S  P   GR RP  DS
Sbjct: 1777 AVRKPAPPGPGEVKRGRGRPRKQRDPVEEVKSQNPVKRGRGRPRKDS 1823


>AE014297-489|AAS65116.1| 2129|Drosophila melanogaster CG17603-PB,
            isoform B protein.
          Length = 2129

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
 Frame = +1

Query: 526  AIRSGQPEGPGQQNYGRESANSARLRIPSYSSSAP---GRRRPEPDS 657
            A+R   P GPG+   GR      R  +    S  P   GR RP  DS
Sbjct: 1777 AVRKPAPPGPGEVKRGRGRPRKQRDPVEEVKSQNPVKRGRGRPRKDS 1823


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,794,073
Number of Sequences: 53049
Number of extensions: 648565
Number of successful extensions: 2252
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2248
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)