Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20018
(606 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 185 2e-47
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 185 2e-47
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 185 2e-47
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 185 2e-47
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 185 2e-47
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 185 2e-47
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 185 2e-47
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 185 2e-47
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 185 2e-47
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 185 2e-47
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 181 4e-46
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 123 1e-28
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 115 2e-26
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 115 2e-26
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 114 5e-26
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 114 5e-26
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 100 2e-21
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 98 4e-21
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 65 3e-11
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 38 0.004
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 38 0.004
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 31 0.48
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 31 0.84
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 31 0.84
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 29 3.4
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 28 4.5
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 5.9
Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical pr... 27 7.9
AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein. 27 7.9
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 7.9
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 7.9
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 7.9
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 7.9
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 185 bits (450), Expect = 2e-47
Identities = 84/91 (92%), Positives = 86/91 (94%)
Frame = +1
Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 417
G + +VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 418 APLNPKANREXMTQIMFXTFNTPAMYVAIQA 510
APLNPKANRE MTQIMF TFNTPAMYVAIQA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQA 139
Score = 115 bits (277), Expect = 2e-26
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +2
Query: 95 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +3
Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
+VLSLYASGR TG+VLDSGDGV+HTVPIYEGYA
Sbjct: 139 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 171
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 185 bits (450), Expect = 2e-47
Identities = 84/91 (92%), Positives = 86/91 (94%)
Frame = +1
Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 417
G + +VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 418 APLNPKANREXMTQIMFXTFNTPAMYVAIQA 510
APLNPKANRE MTQIMF TFNTPAMYVAIQA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQA 139
Score = 114 bits (274), Expect = 5e-26
Identities = 51/53 (96%), Positives = 53/53 (100%)
Frame = +2
Query: 95 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
Score = 66.5 bits (155), Expect = 1e-11
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +3
Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
+VLSLYASGR TGIVLDSGDGV+HTVPIYEGYA
Sbjct: 139 AVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYA 171
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 185 bits (450), Expect = 2e-47
Identities = 84/91 (92%), Positives = 86/91 (94%)
Frame = +1
Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 417
G + +VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 418 APLNPKANREXMTQIMFXTFNTPAMYVAIQA 510
APLNPKANRE MTQIMF TFNTPAMYVAIQA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQA 139
Score = 115 bits (277), Expect = 2e-26
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +2
Query: 95 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +3
Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
+VLSLYASGR TG+VLDSGDGV+HTVPIYEGYA
Sbjct: 139 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 171
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 185 bits (450), Expect = 2e-47
Identities = 84/91 (92%), Positives = 86/91 (94%)
Frame = +1
Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 417
G + +VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 418 APLNPKANREXMTQIMFXTFNTPAMYVAIQA 510
APLNPKANRE MTQIMF TFNTPAMYVAIQA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQA 139
Score = 115 bits (277), Expect = 2e-26
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +2
Query: 95 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +3
Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
+VLSLYASGR TG+VLDSGDGV+HTVPIYEGYA
Sbjct: 139 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 171
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 185 bits (450), Expect = 2e-47
Identities = 84/91 (92%), Positives = 86/91 (94%)
Frame = +1
Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 417
G + +VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 418 APLNPKANREXMTQIMFXTFNTPAMYVAIQA 510
APLNPKANRE MTQIMF TFNTPAMYVAIQA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQA 139
Score = 115 bits (277), Expect = 2e-26
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +2
Query: 95 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +3
Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
+VLSLYASGR TG+VLDSGDGV+HTVPIYEGYA
Sbjct: 139 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 171
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 185 bits (450), Expect = 2e-47
Identities = 84/91 (92%), Positives = 86/91 (94%)
Frame = +1
Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 417
G + +VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 418 APLNPKANREXMTQIMFXTFNTPAMYVAIQA 510
APLNPKANRE MTQIMF TFNTPAMYVAIQA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQA 139
Score = 112 bits (270), Expect = 2e-25
Identities = 49/53 (92%), Positives = 53/53 (100%)
Frame = +2
Query: 95 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
Score = 66.5 bits (155), Expect = 1e-11
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +3
Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
+VLSLYASGR TGIVLDSGDGV+HTVPIYEGYA
Sbjct: 139 AVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYA 171
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 185 bits (450), Expect = 2e-47
Identities = 84/91 (92%), Positives = 86/91 (94%)
Frame = +1
Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 417
G + +VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 418 APLNPKANREXMTQIMFXTFNTPAMYVAIQA 510
APLNPKANRE MTQIMF TFNTPAMYVAIQA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQA 139
Score = 115 bits (277), Expect = 2e-26
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +2
Query: 95 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +3
Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
+VLSLYASGR TG+VLDSGDGV+HTVPIYEGYA
Sbjct: 139 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 171
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 185 bits (450), Expect = 2e-47
Identities = 84/91 (92%), Positives = 86/91 (94%)
Frame = +1
Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 417
G + +VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 5 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 64
Query: 418 APLNPKANREXMTQIMFXTFNTPAMYVAIQA 510
APLNPKANRE MTQIMF TFNTPAMYVAIQA
Sbjct: 65 APLNPKANREKMTQIMFETFNTPAMYVAIQA 95
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +3
Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
+VLSLYASGR TG+VLDSGDGV+HTVPIYEGYA
Sbjct: 95 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 127
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 185 bits (450), Expect = 2e-47
Identities = 84/91 (92%), Positives = 86/91 (94%)
Frame = +1
Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 417
G + +VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 35 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 94
Query: 418 APLNPKANREXMTQIMFXTFNTPAMYVAIQA 510
APLNPKANRE MTQIMF TFNTPAMYVAIQA
Sbjct: 95 APLNPKANREKMTQIMFETFNTPAMYVAIQA 125
Score = 77.0 bits (181), Expect = 1e-14
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = +2
Query: 149 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 39
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +3
Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
+VLSLYASGR TG+VLDSGDGV+HTVPIYEGYA
Sbjct: 125 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 157
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 185 bits (450), Expect = 2e-47
Identities = 84/91 (92%), Positives = 86/91 (94%)
Frame = +1
Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 417
G + +VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 418 APLNPKANREXMTQIMFXTFNTPAMYVAIQA 510
APLNPKANRE MTQIMF TFNTPAMYVAIQA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPAMYVAIQA 139
Score = 115 bits (277), Expect = 2e-26
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +2
Query: 95 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +3
Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
+VLSLYASGR TG+VLDSGDGV+HTVPIYEGYA
Sbjct: 139 AVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYA 171
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 181 bits (440), Expect = 4e-46
Identities = 81/91 (89%), Positives = 85/91 (93%)
Frame = +1
Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 417
G + +VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTE
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTE 107
Query: 418 APLNPKANREXMTQIMFXTFNTPAMYVAIQA 510
APLNPK+NRE MTQIMF TFNTPAMYV IQA
Sbjct: 108 APLNPKSNREKMTQIMFETFNTPAMYVNIQA 138
Score = 109 bits (261), Expect = 2e-24
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +2
Query: 101 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 52
Score = 65.3 bits (152), Expect = 3e-11
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +3
Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
+VLSLYASGR TGIVLD+GDGV+HTVPIYEGYA
Sbjct: 138 AVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYA 170
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 123 bits (296), Expect = 1e-28
Identities = 52/93 (55%), Positives = 72/93 (77%), Gaps = 2/93 (2%)
Frame = +1
Query: 238 GTEG-LFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLL 411
G +G +F+G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLL
Sbjct: 50 GLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLL 109
Query: 412 TEAPLNPKANREXMTQIMFXTFNTPAMYVAIQA 510
T+APLNP NRE +I F TFN PA+Y+ +QA
Sbjct: 110 TDAPLNPLKNRERSAEIFFETFNVPALYIQMQA 142
Score = 56.4 bits (130), Expect = 1e-08
Identities = 24/33 (72%), Positives = 30/33 (90%)
Frame = +3
Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
+VLSLYA+GR TG+VLDSGDGV+H VPI +G+A
Sbjct: 142 AVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFA 174
Score = 52.0 bits (119), Expect = 3e-07
Identities = 21/39 (53%), Positives = 29/39 (74%)
Frame = +2
Query: 119 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 235
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAG 49
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 115 bits (277), Expect = 2e-26
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +2
Query: 95 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
Score = 74.9 bits (176), Expect = 4e-14
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +1
Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 351
G + +VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 115 bits (277), Expect = 2e-26
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +2
Query: 95 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
Score = 74.9 bits (176), Expect = 4e-14
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +1
Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 351
G + +VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 114 bits (274), Expect = 5e-26
Identities = 51/53 (96%), Positives = 53/53 (100%)
Frame = +2
Query: 95 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
Score = 74.9 bits (176), Expect = 4e-14
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +1
Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 351
G + +VGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 114 bits (274), Expect = 5e-26
Identities = 51/53 (96%), Positives = 53/53 (100%)
Frame = +2
Query: 95 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 253
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
Score = 69.3 bits (162), Expect = 2e-12
Identities = 30/35 (85%), Positives = 32/35 (91%)
Frame = +1
Query: 238 GTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDM 342
G + +VGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 99.5 bits (237), Expect = 2e-21
Identities = 45/87 (51%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Frame = +1
Query: 253 FVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 429
F+GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN
Sbjct: 66 FIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLN 125
Query: 430 PKANREXMTQIMFXTFNTPAMYVAIQA 510
NRE +IMF +FN P +Y+A+QA
Sbjct: 126 TPENREYTAEIMFESFNVPGLYIAVQA 152
Score = 38.3 bits (85), Expect = 0.004
Identities = 13/21 (61%), Positives = 19/21 (90%)
Frame = +3
Query: 540 TGIVLDSGDGVSHTVPIYEGY 602
TG+V+DSGDGV+H +P+ +GY
Sbjct: 171 TGLVIDSGDGVTHCIPVADGY 191
Score = 36.7 bits (81), Expect = 0.013
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +2
Query: 95 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 202
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 98.3 bits (234), Expect = 4e-21
Identities = 46/97 (47%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Frame = +1
Query: 223 RDGRYGTEGLFVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEH 399
R G + L VG+E R +L + YP+++GIV NWDDM +W HTF E L + P+E
Sbjct: 46 RVGNIEIKDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKEC 105
Query: 400 PVLLTEAPLNPKANREXMTQIMFXTFNTPAMYVAIQA 510
+LLTE PLNP +NRE M Q+MF + ++YVA+QA
Sbjct: 106 KLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQA 142
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/33 (63%), Positives = 28/33 (84%)
Frame = +3
Query: 507 SVLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
+VL+LYA G TG+V+DSGDGV+H P+YEG+A
Sbjct: 142 AVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFA 174
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +2
Query: 119 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 211
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 65.3 bits (152), Expect = 3e-11
Identities = 28/72 (38%), Positives = 43/72 (59%)
Frame = +1
Query: 307 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMTQIMFXTFNTP 486
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A RE +T+IMF F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 487 AMYVAIQACSRC 522
A Y++ C
Sbjct: 154 AYYLSKNVVLSC 165
Score = 37.1 bits (82), Expect = 0.010
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +3
Query: 510 VLSLYASGRXTGIVLDSGDGVSHTVPIYEGYA 605
VLS +A GR G+++DSG + VP+++GYA
Sbjct: 162 VLSCFAQGRTHGLMVDSGATQTSVVPVFDGYA 193
Score = 33.5 bits (73), Expect = 0.12
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +2
Query: 104 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 202
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 38.3 bits (85), Expect = 0.004
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +1
Query: 211 PPSGRDGRYGTEGLFVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRV 384
P S ++ + +FV E + +L Y PIE G V NWD ++IW TF + V
Sbjct: 29 PNSIVKAKHEKKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDV 87
Query: 385 APEEHPVLLTEAPLNPKANREXMTQIMFXTF 477
+ LT+ A + ++I+F F
Sbjct: 88 EASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 38.3 bits (85), Expect = 0.004
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +1
Query: 211 PPSGRDGRYGTEGLFVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRV 384
P S ++ + +FV E + +L Y PIE G V NWD ++IW TF + V
Sbjct: 29 PNSIVKAKHEKKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDV 87
Query: 385 APEEHPVLLTEAPLNPKANREXMTQIMFXTF 477
+ LT+ A + ++I+F F
Sbjct: 88 EASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 31.5 bits (68), Expect = 0.48
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +3
Query: 492 VRRHPSVLSLYASGRXTGIVLDSGDGVSHTVPIYEGY 602
+ R PS++ LYA TG+V+D G+ V + VP+ +GY
Sbjct: 307 ITRQPSLI-LYAYDVTTGVVVDIGERV-NIVPVIDGY 341
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 30.7 bits (66), Expect = 0.84
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = -2
Query: 356 CQIFSMSSQLVTIPC-SMGYLRVRIP---LLLCASSPTKSPSVPYRPSRPDG 213
CQ+FS QLVT+ SMG +++++ L L AS + P++ P DG
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNPPEIDG 302
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 30.7 bits (66), Expect = 0.84
Identities = 20/72 (27%), Positives = 28/72 (38%)
Frame = +1
Query: 388 PEEHPVLLTEAPLNPKANREXMTQIMFXTFNTPAMYVAIQACSRCTRPVVXPVSCWTPAT 567
P P + +P P T + T +T A + S T P V PV+ TP T
Sbjct: 629 PTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTT 688
Query: 568 VSPTPCXSTKDT 603
+ T +T T
Sbjct: 689 TTSTTTTTTTTT 700
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 30.7 bits (66), Expect = 0.84
Identities = 20/72 (27%), Positives = 28/72 (38%)
Frame = +1
Query: 388 PEEHPVLLTEAPLNPKANREXMTQIMFXTFNTPAMYVAIQACSRCTRPVVXPVSCWTPAT 567
P P + +P P T + T +T A + S T P V PV+ TP T
Sbjct: 685 PTSPPSTVGTSPTAPANLTTPTTAPVNPTSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTT 744
Query: 568 VSPTPCXSTKDT 603
+ T +T T
Sbjct: 745 TTSTTTTTTTTT 756
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +1
Query: 199 RGKAPPSGRDGRYGTEGLFVGDEAQSKRG 285
RGKA +GRDGR G EG Q +RG
Sbjct: 216 RGKAGHTGRDGRPGLEGTPGTRGVQGERG 244
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 28.3 bits (60), Expect = 4.5
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 472 TFNTPAMYVAIQACSRCTRPVVXPVSCWTPATVSPTPCXSTKDT 603
T +T A + S T P V PV+ TP T + T +T T
Sbjct: 536 TSSTTAPTAPVNPTSPTTAPTVPPVTTTTPTTTTSTTTTTTTTT 579
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 149 KAGFAGDDAPRAVFPSIVGRPRHQG 223
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical
protein F08G12.10 protein.
Length = 419
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 481 TPAMYVAIQACSRCTRPVVXPVSCWTPATVS 573
TP + VA+ C + P+ CWTP S
Sbjct: 36 TPFVLVAMTLAISCKQYFGQPIKCWTPREFS 66
>AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein.
Length = 419
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 481 TPAMYVAIQACSRCTRPVVXPVSCWTPATVS 573
TP + VA+ C + P+ CWTP S
Sbjct: 36 TPFVLVAMTLAISCKQYFGQPIKCWTPREFS 66
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 174 ASSPAKPALHIPEPLSTTNAATSS 103
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 174 ASSPAKPALHIPEPLSTTNAATSS 103
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 174 ASSPAKPALHIPEPLSTTNAATSS 103
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -1
Query: 174 ASSPAKPALHIPEPLSTTNAATSS 103
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,235,795
Number of Sequences: 27780
Number of extensions: 309512
Number of successful extensions: 1147
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1145
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -