Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20016
(648 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_1091 - 10015180-10015236,10015705-10015779,10015874-100161... 103 9e-23
05_04_0333 + 20333243-20333329,20335048-20335110,20335276-203353... 102 3e-22
05_03_0407 + 13582595-13582681,13583067-13583129,13583289-135833... 101 7e-22
03_02_0544 - 9362615-9362674,9362783-9362857,9362934-9363144,936... 101 7e-22
01_01_1165 - 9267891-9268145,9268395-9268510,9268991-9269127,926... 35 0.064
08_01_1077 - 11027732-11027839,11028346-11028477,11029722-110298... 29 2.4
11_01_0151 - 1263237-1263406,1267405-1267646,1267681-1267781,126... 29 3.2
02_04_0468 - 23172561-23174201 29 4.2
07_03_0288 + 16285485-16285721,16285811-16286184,16286499-162868... 28 5.6
03_06_0165 - 32108697-32109788 28 5.6
11_04_0204 - 14844634-14844789,14844882-14845418,14846280-14846888 28 7.4
11_04_0455 + 17903921-17904046,17904149-17904214,17905028-179051... 27 9.7
08_01_0016 - 109152-109214,109296-109385,109853-109954,110046-11... 27 9.7
>07_01_1091 -
10015180-10015236,10015705-10015779,10015874-10016149,
10016204-10016332,10017070-10017171,10017626-10017688,
10017776-10017856,10018218-10018314,10019064-10019236,
10019327-10019434,10019706-10019789,10019985-10020047,
10020483-10020569
Length = 464
Score = 103 bits (248), Expect = 9e-23
Identities = 50/85 (58%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 ILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAPA-PDETYGRGRDWNVDLI 177
ILSG+LSV KVLH+DRN YYGG+S S+ L +L+ +F P G RD+NVD+I
Sbjct: 18 ILSGLLSVDRLKVLHMDRNDYYGGDSTSLN-LNQLWKRFKGEGTPPAQIGASRDYNVDMI 76
Query: 178 PKFLMANGLLVKLLIHTGVTRYLEF 252
PKF+MANG LV++LIHTGVT+YL F
Sbjct: 77 PKFMMANGTLVRVLIHTGVTKYLSF 101
Score = 93.9 bits (223), Expect = 1e-19
Identities = 43/86 (50%), Positives = 57/86 (66%)
Frame = +3
Query: 255 SIEGSYVYKGGKISKVPVDQKEALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDP 434
+++GSYV+ GKI KVP EAL S LMG+FEKRR F ++VQD++E D T K +D
Sbjct: 103 AVDGSYVFNKGKIHKVPSTDMEALKSPLMGLFEKRRAGKFFLFVQDYKENDPSTHKGYDL 162
Query: 435 STANMQSLYDKFGLDRNTQDFTGHAL 512
+ + L K+GLD NT DF GHA+
Sbjct: 163 NKMTTKELISKYGLDDNTIDFIGHAV 188
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 509 LALYLDDNYLQQPAIQTIRRIKLYSDSLAKY 601
+AL+ +DNYL +PAI T LY++S+ ++
Sbjct: 188 VALHKEDNYLTEPAIDT-----LYAESVGRF 213
>05_04_0333 +
20333243-20333329,20335048-20335110,20335276-20335359,
20335720-20335827,20335969-20336141,20337135-20337246,
20337468-20337548,20337635-20337697,20337779-20337880,
20338070-20338194,20338317-20338527,20338625-20338699,
20338990-20339043
Length = 445
Score = 102 bits (244), Expect = 3e-22
Identities = 49/85 (57%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 ILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAP-APDETYGRGRDWNVDLI 177
ILSG+LSV G KVLH+DRN YYGG+S S+ L +L+ +F P G RD+NVD++
Sbjct: 18 ILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKRFRGEDKPPAHLGASRDYNVDMV 76
Query: 178 PKFLMANGLLVKLLIHTGVTRYLEF 252
PKF+MANG LV+ LIHT VT+YL F
Sbjct: 77 PKFMMANGTLVRTLIHTDVTKYLSF 101
Score = 99.5 bits (237), Expect = 2e-21
Identities = 47/86 (54%), Positives = 58/86 (67%)
Frame = +3
Query: 255 SIEGSYVYKGGKISKVPVDQKEALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDP 434
+++GSYV+ GKI KVP EAL S LMG+FEKRR RNF IYVQD+ E D KT + D
Sbjct: 103 AVDGSYVFSKGKIHKVPATDMEALKSPLMGLFEKRRARNFFIYVQDYDEADPKTHQGLDL 162
Query: 435 STANMQSLYDKFGLDRNTQDFTGHAL 512
+T + L K+GL +T DF GHAL
Sbjct: 163 TTMTTRELIAKYGLSDDTVDFIGHAL 188
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/31 (58%), Positives = 27/31 (87%)
Frame = +2
Query: 509 LALYLDDNYLQQPAIQTIRRIKLYSDSLAKY 601
LAL+ DD YL +PAI T++R+KLY++SLA++
Sbjct: 188 LALHRDDRYLNEPAIDTVKRMKLYAESLARF 218
>05_03_0407 +
13582595-13582681,13583067-13583129,13583289-13583372,
13583757-13583864,13584018-13584190,13585190-13585301,
13585424-13585504,13585611-13585673,13585764-13585865,
13586063-13586187,13586316-13586526,13586614-13586688,
13586950-13587003
Length = 445
Score = 101 bits (241), Expect = 7e-22
Identities = 48/85 (56%), Positives = 62/85 (72%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 ILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAP-APDETYGRGRDWNVDLI 177
ILSG+LSV G KVLH+DRN YYGG+S S+ L +L+ +F P G +D+NVD++
Sbjct: 18 ILSGLLSVDGLKVLHMDRNDYYGGDSTSLN-LNQLWKRFRGEDKPPAHLGSSKDYNVDMV 76
Query: 178 PKFLMANGLLVKLLIHTGVTRYLEF 252
PKF+MANG LV+ LIHT VT+YL F
Sbjct: 77 PKFMMANGTLVRTLIHTDVTKYLSF 101
Score = 99.5 bits (237), Expect = 2e-21
Identities = 47/86 (54%), Positives = 58/86 (67%)
Frame = +3
Query: 255 SIEGSYVYKGGKISKVPVDQKEALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDP 434
+++GSYV+ GKI KVP EAL S LMG+FEKRR RNF IYVQD+ E D KT + D
Sbjct: 103 AVDGSYVFSKGKIHKVPATDMEALKSPLMGLFEKRRARNFFIYVQDYNEADPKTHQGLDL 162
Query: 435 STANMQSLYDKFGLDRNTQDFTGHAL 512
+T + L K+GL +T DF GHAL
Sbjct: 163 TTMTTRELIAKYGLSDDTVDFIGHAL 188
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/31 (58%), Positives = 27/31 (87%)
Frame = +2
Query: 509 LALYLDDNYLQQPAIQTIRRIKLYSDSLAKY 601
LAL+ DD YL +PAI T++R+KLY++SLA++
Sbjct: 188 LALHRDDRYLNEPAIDTVKRMKLYAESLARF 218
>03_02_0544 -
9362615-9362674,9362783-9362857,9362934-9363144,
9363279-9363403,9363492-9363593,9363676-9363738,
9363817-9363897,9364248-9364359,9364454-9364626,
9364722-9364829,9364909-9364992,9365131-9365193,
9365652-9365738
Length = 447
Score = 101 bits (241), Expect = 7e-22
Identities = 50/86 (58%), Positives = 66/86 (76%), Gaps = 2/86 (2%)
Frame = +1
Query: 1 ILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKF--NAPAPDETYGRGRDWNVDL 174
I+SG+LSV G KVLH+DRN YYGGES S+ L +L+ +F N AP E G +++NVD+
Sbjct: 18 IISGLLSVDGLKVLHMDRNDYYGGESTSLN-LTKLWKRFKGNETAP-EHLGVSKEYNVDM 75
Query: 175 IPKFLMANGLLVKLLIHTGVTRYLEF 252
+PKF+MANG LV++LIHT VT+YL F
Sbjct: 76 VPKFMMANGALVRVLIHTSVTKYLNF 101
Score = 96.3 bits (229), Expect = 2e-20
Identities = 43/86 (50%), Positives = 59/86 (68%)
Frame = +3
Query: 255 SIEGSYVYKGGKISKVPVDQKEALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKDFDP 434
+++GS+VY GKI KVP EAL S+LMG+FEKRR R F IYVQD++E+D K+ + D
Sbjct: 103 AVDGSFVYNNGKIHKVPATDVEALKSNLMGLFEKRRARKFFIYVQDYEEDDPKSHEGLDL 162
Query: 435 STANMQSLYDKFGLDRNTQDFTGHAL 512
+ + K+GL+ +T DF GHAL
Sbjct: 163 HKVTTREVISKYGLEDDTVDFIGHAL 188
Score = 48.4 bits (110), Expect = 5e-06
Identities = 19/31 (61%), Positives = 28/31 (90%)
Frame = +2
Query: 509 LALYLDDNYLQQPAIQTIRRIKLYSDSLAKY 601
LAL+ DDNYL +PAI T++R+KLY++SLA++
Sbjct: 188 LALHRDDNYLDEPAIDTVKRMKLYAESLARF 218
>01_01_1165 -
9267891-9268145,9268395-9268510,9268991-9269127,
9269645-9269808,9269892-9269972,9270783-9270962,
9271489-9271929,9273234-9273344,9274355-9274463,
9274618-9274643,9274823-9274903,9275013-9275211,
9275374-9275449,9275553-9275769,9276117-9276155,
9276684-9276783,9276962-9277084,9277171-9277895
Length = 1059
Score = 34.7 bits (76), Expect = 0.064
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +1
Query: 1 ILSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAPAPDE 138
+L+ + +GK VLH+D N +YG +S+ PL L F +P+P +
Sbjct: 37 VLAAACAAAGKTVLHVDPNPFYGSLFSSL-PLPSL-PSFLSPSPSD 80
>08_01_1077 -
11027732-11027839,11028346-11028477,11029722-11029802,
11029911-11030063,11030167-11030281,11030282-11030927,
11031409-11031613,11031696-11031758
Length = 500
Score = 29.5 bits (63), Expect = 2.4
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Frame = +3
Query: 408 AKTWKDFDPSTANMQSLYDKFGLDR-NTQDFTGHALPFIWMIIICNSLLS---RPFA--- 566
+K WK+ S + DKFG+DR +F H L + NSL + FA
Sbjct: 137 SKRWKELSASAPCLDICVDKFGMDRVRFSEFVAHLL----LSRAPNSLHTFRLHSFAIDH 192
Query: 567 ASSCILIH*RSMVSLLTFTHCMDWENF 647
ASS I +L FT + WE+F
Sbjct: 193 ASSWINRAIELKAQVLEFTEYIRWESF 219
>11_01_0151 -
1263237-1263406,1267405-1267646,1267681-1267781,
1268010-1268780
Length = 427
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/60 (21%), Positives = 33/60 (55%)
Frame = +3
Query: 246 GV*SIEGSYVYKGGKISKVPVDQKEALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKD 425
G+ ++ +++ G + + + + +A D + K+R RN L+YV+D + +++W +
Sbjct: 57 GLELVKQRIIWRVGNGDNIKIWRHKWVAHDDRLITLKKRVRNRLMYVKDLMDAGSRSWNE 116
>02_04_0468 - 23172561-23174201
Length = 546
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 300 VPVDQKEALASDLMGMFEKRRFRNFLIYVQDFQEEDAKTWKD 425
VPVD KEALA D++ R R +IY D +W D
Sbjct: 380 VPVDFKEALADDVLPDGTPVRARQRVIYYTYAIGRDPASWGD 421
>07_03_0288 +
16285485-16285721,16285811-16286184,16286499-16286892,
16286917-16287806,16291189-16291446,16291518-16291628,
16291697-16291775,16291880-16291972,16292095-16292280
Length = 873
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 261 EGSYVYKGGKISKVPVDQKEALASDLMGMFEKRRFRNFLIY 383
EG V+K K+ +V V K + G F R R+ LIY
Sbjct: 217 EGDVVFKDQKLKEVAVKMKNIVMQQQAGTFVPDRDRDELIY 257
>03_06_0165 - 32108697-32109788
Length = 363
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +1
Query: 37 VLHIDRNKYYGGESASITPLEELFAKFNAPAPDETYGRGRDWNVDLIPKFLMANGLLVKL 216
++ ID + E + P+EE + P P + + R++ V L P+F++ + K+
Sbjct: 158 IMDIDPTYWCSSEVLAYDPVEECWCW--GPLPQPPFFQDREYKVPLKPRFMVVDS--TKI 213
Query: 217 LIHTGVTRY 243
+ T Y
Sbjct: 214 CVSTTTATY 222
>11_04_0204 - 14844634-14844789,14844882-14845418,14846280-14846888
Length = 433
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +1
Query: 157 DWNVDLIPKFLMANGLLVKLLIHTGVTRYLEFNPSKEV 270
DW V P ++ +G LLIH GV EF S +V
Sbjct: 92 DWGVGAGPDLIVDDGGDATLLIHEGVKAEEEFEKSGKV 129
>11_04_0455 +
17903921-17904046,17904149-17904214,17905028-17905116,
17905513-17905658,17905743-17905867,17905964-17906057,
17906144-17906307,17906449-17906610,17906683-17906809,
17906854-17906862,17906912-17907078,17907113-17907307,
17907398-17907490
Length = 520
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 67 GGESASITPLEELFAKFNAPAPDETYGRGRDWNVDLIPKFLMANGLLV 210
GG + T LEEL A+F +G G N +IP + GL++
Sbjct: 142 GGTTKLHTELEELVARFVGKPAAILFGMGYVTNSAIIPCLVGKGGLII 189
>08_01_0016 -
109152-109214,109296-109385,109853-109954,110046-110213,
110510-110530,110836-110896,110987-111099,112125-112202,
112294-112434,112532-112696,112776-112868,113096-113162,
113285-113388,113896-114041,114303-114579
Length = 562
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 4 LSGMLSVSGKKVLHIDRNKYYGGESASITPLEELFAKFNAPAP 132
L G+L + KK+ H N+ G AS+ LE+L P P
Sbjct: 101 LGGLLILLPKKLNHEPNNEDKGQVKASLAELEQLLLHQQVPYP 143
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,317,468
Number of Sequences: 37544
Number of extensions: 382983
Number of successful extensions: 1080
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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