Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20015
         (619 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q39J26 Cluster: Putative uncharacterized protein; n=5; ...    33   4.1  
UniRef50_Q1ZD58 Cluster: Putative uncharacterized protein; n=1; ...    33   7.2  
UniRef50_Q9AHC7 Cluster: Wzy; n=1; Streptococcus pneumoniae|Rep:...    32   9.5  
UniRef50_Q3W112 Cluster: Putative uncharacterized protein; n=1; ...    32   9.5  
UniRef50_A5K2L1 Cluster: Putative uncharacterized protein; n=1; ...    32   9.5  
UniRef50_A5K188 Cluster: Putative uncharacterized protein; n=1; ...    32   9.5  

>UniRef50_Q39J26 Cluster: Putative uncharacterized protein; n=5;
           Burkholderia cepacia complex|Rep: Putative
           uncharacterized protein - Burkholderia sp. (strain 383)
           (Burkholderia cepacia (strain ATCC 17760/ NCIB 9086 /
           R18194))
          Length = 941

 Score = 33.5 bits (73), Expect = 4.1
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
 Frame = +3

Query: 279 LSGAISQVEGELGEEG-SKTRTGSVYTAANSAGFYGSGNYDLSNLRGRNFQEGTYLDNAH 455
           + G ++QV G LG    +   TG++ T   + G  G G+Y L  ++G   Q  T L+N +
Sbjct: 339 VQGVVNQVTGALGSGNPAGALTGALGTVTGALGNVGGGSYPLGAVQGVVNQVTTALNNGN 398

Query: 456 -SSLLSNA 476
            +S L+ A
Sbjct: 399 PASALTGA 406


>UniRef50_Q1ZD58 Cluster: Putative uncharacterized protein; n=1;
           Psychromonas sp. CNPT3|Rep: Putative uncharacterized
           protein - Psychromonas sp. CNPT3
          Length = 198

 Score = 32.7 bits (71), Expect = 7.2
 Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
 Frame = +3

Query: 282 SGAISQVEGELGEEGSKTRTGSVYTAANSAGFYGSGNYDLSNLRGRNFQEGTY---LDNA 452
           SGA S    E G   S T + SVY    + GF  +G ++  N+ G N   GT     DNA
Sbjct: 36  SGAKSGSIHESGITYSSTYSSSVYGYDGNYGFLRNGRWNNMNMIGLNTSFGTMTIEFDNA 95

Query: 453 HSSLLSNAQY 482
            S +L+   Y
Sbjct: 96  VSEVLAFVNY 105


>UniRef50_Q9AHC7 Cluster: Wzy; n=1; Streptococcus pneumoniae|Rep:
           Wzy - Streptococcus pneumoniae
          Length = 466

 Score = 32.3 bits (70), Expect = 9.5
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -1

Query: 535 ITELTIAIMEFLFIACVLYCALDN-NEECALSRYVPS 428
           I  +T+  + F+F  C L+  LDN N    +S YVPS
Sbjct: 6   ICRVTLVTLSFIFAFCYLFWTLDNWNNGFLISNYVPS 42


>UniRef50_Q3W112 Cluster: Putative uncharacterized protein; n=1;
           Frankia sp. EAN1pec|Rep: Putative uncharacterized
           protein - Frankia sp. EAN1pec
          Length = 322

 Score = 32.3 bits (70), Expect = 9.5
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
 Frame = +3

Query: 276 HLSGAISQVEGELGEEGSKTRTGSVY-TAANSAGFYGSGNYDLSNLRGRNFQEGTYLDNA 452
           H++GA S      G  G+     S Y T A   G +G+G Y   + R   +  G Y   A
Sbjct: 64  HVTGAHSISTDSTGVHGTGAHGASAYDTGAYDTGSHGAGGYGTGSHRTGAYDTGGYRPGA 123

Query: 453 H 455
           H
Sbjct: 124 H 124


>UniRef50_A5K2L1 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 344

 Score = 32.3 bits (70), Expect = 9.5
 Identities = 19/61 (31%), Positives = 30/61 (49%)
 Frame = +3

Query: 252 QMDSLAQRHLSGAISQVEGELGEEGSKTRTGSVYTAANSAGFYGSGNYDLSNLRGRNFQE 431
           +++S  +R++ G  S  EG     G   R+       N +G  GSGN    N+ G N++E
Sbjct: 57  ELNSFIERNIPGGASPEEG-----GDWNRSDDGLEFMNVSGNNGSGNNASGNVAGNNYRE 111

Query: 432 G 434
           G
Sbjct: 112 G 112


>UniRef50_A5K188 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 787

 Score = 32.3 bits (70), Expect = 9.5
 Identities = 19/65 (29%), Positives = 33/65 (50%)
 Frame = +3

Query: 294 SQVEGELGEEGSKTRTGSVYTAANSAGFYGSGNYDLSNLRGRNFQEGTYLDNAHSSLLSN 473
           + V+G+ G +G    +G+  +AAN +G   S  +  +N  G   +EG  + N +  LL  
Sbjct: 434 ADVDGDRGGDGRGNPSGANPSAANPSGNVSSMYHTGNNGSGYPNEEGDKISNLYKCLLCK 493

Query: 474 AQYST 488
             YS+
Sbjct: 494 KLYSS 498


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 565,576,941
Number of Sequences: 1657284
Number of extensions: 10756103
Number of successful extensions: 28010
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 26798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27979
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)