Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20015
(619 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_1489| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.77) 33 0.25
SB_20662| Best HMM Match : bZIP_1 (HMM E-Value=0.89) 31 0.99
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_4837| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_20482| Best HMM Match : p450 (HMM E-Value=4.6e-28) 29 2.3
SB_56738| Best HMM Match : Extensin_2 (HMM E-Value=0.076) 29 4.0
>SB_1489| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.77)
Length = 872
Score = 32.7 bits (71), Expect = 0.25
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Frame = +3
Query: 342 GSVYTAANSA-GFYGSGNY-----DLSNLRGRNFQEGTYLDNAHS 458
G +YT N A G+Y GNY D SN G N+ G Y D ++
Sbjct: 214 GGIYTDGNYADGYYAGGNYADGNHDDSNYAGGNYTGGNYADGNYT 258
Score = 32.3 bits (70), Expect = 0.32
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 351 YTAANSAG-FYGSGNYDLSNLRGRNFQEGTYLDNAHS 458
Y N AG +Y SGNY N G N+ +G Y D ++
Sbjct: 442 YADGNYAGGYYASGNYADGNYAGGNYADGNYEDGNYA 478
Score = 31.9 bits (69), Expect = 0.43
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 GSVYTAANSA-GFYGSGNYDLSNLRGRNFQEGTYLDNAHS 458
G Y N G+Y GNY N G N+ +G Y D ++
Sbjct: 274 GGNYADGNHTDGYYADGNYTDGNYTGGNYADGNYADGYYA 313
Score = 31.9 bits (69), Expect = 0.43
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 351 YTAANSA-GFYGSGNYDLSNLRGRNFQEGTYLDNAHS 458
YT N A G Y GNY N G N+ +G Y D ++
Sbjct: 722 YTGGNYADGNYADGNYADGNYAGGNYADGNYADGNYA 758
Score = 31.5 bits (68), Expect = 0.57
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 GSVYTAANSAGF-YGSGNYDLSNLRGRNFQEGTYLDNAHS 458
G Y N AG Y GNY N G N+ +G Y D ++
Sbjct: 544 GGNYAGGNYAGGNYADGNYTGGNYAGGNYADGNYADGNYT 583
Score = 31.1 bits (67), Expect = 0.75
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 342 GSVYTAANSAG-FYGSGNYDLSNLRGRNFQEGTY 440
G Y N AG +Y GNY N G N+ +G Y
Sbjct: 479 GGYYADGNYAGGYYAGGNYADGNYAGGNYADGNY 512
Score = 30.7 bits (66), Expect = 0.99
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 351 YTAANSAGF-YGSGNYDLSNLRGRNFQEGTY 440
YT N AG Y GNY N G N+++G Y
Sbjct: 562 YTGGNYAGGNYADGNYADGNYTGGNYEDGNY 592
Score = 30.7 bits (66), Expect = 0.99
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +3
Query: 339 TGSVYTAANSAGF-YGSGNYDLSNLRGRNFQEGTYLDNAH 455
TG Y N AG Y GNY N G + G Y D H
Sbjct: 678 TGGNYAGGNYAGGNYADGNYTGGNYAGGYYAGGNYADGNH 717
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Frame = +3
Query: 342 GSVYTAANSA-GFYGSGNY-----DLSNLRGRNFQEGTYLDNAHS 458
G YT N A G+Y GNY D SN G N+ G Y D ++
Sbjct: 68 GGNYTDGNYADGYYAGGNYADGNHDDSNYAGGNYTGGNYADGNYT 112
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 342 GSVYTAANSAG-FYGSGNYDLSNLRGRNFQEGTY 440
G Y N AG +Y GNY N G N+ +G Y
Sbjct: 594 GGNYADGNYAGGYYAGGNYADGNYAGGNYADGNY 627
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +3
Query: 342 GSVYTAANSAGF-YGSGNYDLSNLRGRNFQEGTYLDNAH 455
G Y N AG Y GNY N N+ +G Y D H
Sbjct: 764 GGNYAGGNYAGGNYAGGNYAGGNYADGNYADGNYADGNH 802
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = +3
Query: 351 YTAANSAGF-YGSGNYDLSNLRGRNFQEGTYLDNAHS 458
Y N AG Y GNY N G N+ +G Y D ++
Sbjct: 762 YAGGNYAGGNYAGGNYAGGNYAGGNYADGNYADGNYA 798
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +3
Query: 342 GSVYTAANSA-GFYGSGNYDLSNLRGRNFQEGTY 440
G Y N A G Y GNY N G N+ +G Y
Sbjct: 489 GGYYAGGNYADGNYAGGNYADGNYAGGNYADGNY 522
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Frame = +3
Query: 339 TGSVYTAANSA-GFYGSGNYDLSNLRGRNFQEGTYLDNAHS 458
TG Y N A G Y GNY N N+ G Y D ++
Sbjct: 563 TGGNYAGGNYADGNYADGNYTGGNYEDGNYAGGNYADGNYA 603
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +3
Query: 342 GSVYTAANSA-GFYGSGNYDLSNLRGRNFQEGTY 440
G Y N A G Y GNY N G N+ +G Y
Sbjct: 604 GGYYAGGNYADGNYAGGNYADGNYAGGNYADGNY 637
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +3
Query: 339 TGSVYTAANSA-GFYGSGNYDLSNLRGRNFQEGTYLDNAHS 458
TG Y N A G Y GNY N N+ +G Y D ++
Sbjct: 723 TGGNYADGNYADGNYADGNYAGGNYADGNYADGNYADGNYA 763
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 GSVYTAANSAGF-YGSGNYDLSNLRGRNFQEGTYLDNAHS 458
G Y N AG Y GN+ N G N+ +G Y D ++
Sbjct: 118 GGYYADGNYAGGNYADGNHIDGNYTGGNYADGNYADGNYT 157
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +3
Query: 342 GSVYTAANSAGFYGSGNYDLSNLRGRNFQEGTYLDNAHS 458
G+ N+ G Y GNY N G N+ G Y D ++
Sbjct: 355 GNYADGNNADGNYAGGNYAGGNYAGGNYAGGYYADGYYT 393
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 GSVYTAANSAG-FYGSGNYDLSNLRGRNFQEGTYLDNAHS 458
G Y N AG +Y GNY N G N+ Y D ++
Sbjct: 163 GGYYADGNYAGGYYADGNYIDGNYTGGNYAGCNYADGYYA 202
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 372 GFYGSGNYDLSNLRGRNFQEGTYLDNAHS 458
G+Y GNY N G N+ G Y D ++
Sbjct: 390 GYYTDGNYTDGNYAGGNYAGGYYADGNYA 418
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +3
Query: 351 YTAANSAG-FYGSGNYDLSNLRGRNFQEGTY 440
Y N AG +Y GNY N G N+ G Y
Sbjct: 522 YAGGNYAGGYYTDGNYTDGNYAGGNYAGGNY 552
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +3
Query: 339 TGSVYTAANSA-GFYGSGNYDLSNLRGRNFQEGTYLDNAHS 458
TG Y N A G+Y GNY N + +G Y D ++
Sbjct: 298 TGGNYADGNYADGYYADGNYIDGNYTDGYYADGYYADGNYA 338
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +3
Query: 342 GSVYTAANSA-GFYGSGNYDLSNLRGRNFQEGTYLDNAHS 458
G Y + N A G Y GNY N N+ G Y D ++
Sbjct: 449 GGYYASGNYADGNYAGGNYADGNYEDGNYAGGYYADGNYA 488
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +3
Query: 351 YTAANSA-GFYGSGNYDLSNLRGRNFQEGTYLDNAHS 458
Y N A G Y GNY N G N+ G Y D ++
Sbjct: 502 YAGGNYADGNYAGGNYADGNYAGGNYAGGYYTDGNYT 538
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +3
Query: 339 TGSVYTAANSAGF-YGSGNYDLSNLRGRNFQEGTYLDNAHS 458
TG Y AG Y GN+ N G N+ +G Y D ++
Sbjct: 698 TGGNYAGGYYAGGNYADGNHIDGNYTGGNYADGNYADGNYA 738
>SB_20662| Best HMM Match : bZIP_1 (HMM E-Value=0.89)
Length = 589
Score = 30.7 bits (66), Expect = 0.99
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Frame = +1
Query: 214 QRGNMGGNYERAHKWIHLLKDI*AARS-HKLKESWARRDQKPERVACTLLQILRAFMDRE 390
QRG GG+ E++ + I + ++ RS + +E+ +RD PE + L Q + + E
Sbjct: 260 QRGPQGGSSEQSTREITITRESPERRSGQRTREAVVQRD-GPEETSGQLTQEVISQSPEE 318
Query: 391 IMILVT*GDVIFKKERT*IMRTPHCYPTRNIVRKR 495
+ + T +I ER + R P PTR ++++R
Sbjct: 319 LSVQSTRETII---EREELKRYPG-KPTREVIKQR 349
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 30.7 bits (66), Expect = 0.99
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Frame = +1
Query: 214 QRGNMGGNYERAHKWIHLLKDI*AARS-HKLKESWARRDQKPERVACTLLQILRAFMDRE 390
QRG GG+ E++ + I + ++ RS + +E+ +RD PE + L Q + + E
Sbjct: 3366 QRGPQGGSSEQSTREITITRESPERRSGQRTREAVVQRD-GPEETSGQLTQEVISQSPEE 3424
Query: 391 IMILVT*GDVIFKKERT*IMRTPHCYPTRNIVRKR 495
+ + T +I ER + R P PTR ++++R
Sbjct: 3425 LSVQSTRETII---EREELKRYPG-KPTREVIKQR 3455
>SB_4837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 121
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Frame = -2
Query: 411 LGY*DHNFPIHKSPQNLQQCTRYPFWFLIPPRPT----LLQLVRSRRSNVFEQV-NPFVS 247
L Y N+P KS ++ + Y +P+ L +VRS + + + NP+V+
Sbjct: 20 LRYASVNYPFSKSKLSVTRARAYKVARCRTIQPSIGEALSSIVRSSHLPIHQYITNPYVT 79
Query: 246 TFIITPHVSSLRTIKSRLATF 184
TP V LR KS L +
Sbjct: 80 NTTFTPEVHKLRISKSFLCEY 100
>SB_20482| Best HMM Match : p450 (HMM E-Value=4.6e-28)
Length = 473
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = -1
Query: 256 ICEHVHNYPPCFLFAHHKIQTCYLRPTNF*NSESLLF-LYKV----QVWPKP 116
+ E + YPP FL A + C ++ F S++ +Y + ++WP+P
Sbjct: 412 VSETLRMYPPAFLQAREVTEDCVIKDMRFRKGVSIIMDIYSLHHDPELWPEP 463
>SB_56738| Best HMM Match : Extensin_2 (HMM E-Value=0.076)
Length = 869
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/19 (63%), Positives = 16/19 (84%), Gaps = 1/19 (5%)
Frame = -1
Query: 325 PSSPNSPSTC-EIAPLKCL 272
P+SP+SPSTC E+ P+K L
Sbjct: 166 PTSPDSPSTCDEVLPMKFL 184
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,635,194
Number of Sequences: 59808
Number of extensions: 354710
Number of successful extensions: 936
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 913
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1524174750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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