Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20013
         (505 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B43F6 Cluster: PREDICTED: similar to pol-like p...    39   0.056
UniRef50_UPI00015B43EC Cluster: PREDICTED: similar to pol-like p...    38   0.13 
UniRef50_Q1ZBP6 Cluster: Putative uncharacterized protein; n=1; ...    36   0.52 
UniRef50_A7BX17 Cluster: Mechanosensitive ion channel; n=1; Begg...    34   1.6  
UniRef50_Q4PDE2 Cluster: Putative uncharacterized protein; n=1; ...    32   6.4  
UniRef50_UPI0000E47E5C Cluster: PREDICTED: similar to Low-densit...    32   8.5  
UniRef50_UPI0000E1EF16 Cluster: PREDICTED: hypothetical protein;...    32   8.5  
UniRef50_A2EJF1 Cluster: LIM domain containing protein; n=4; Tri...    32   8.5  

>UniRef50_UPI00015B43F6 Cluster: PREDICTED: similar to pol-like
           protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
           similar to pol-like protein - Nasonia vitripennis
          Length = 963

 Score = 39.1 bits (87), Expect = 0.056
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = -2

Query: 417 LKNGALGFIPSPPWWDQECSDAIKKRKQVELQYCENCTSENFDLVTDAFKATSLYSXRKK 238
           +  G     P PPWW+ E   A++ RK     Y +N  SEN+    ++  A  L +   K
Sbjct: 288 ISKGERVITPKPPWWNSELDRAVEDRKTKLDVYRDNKNSENYQKYAESMNALKLLAKTLK 347


>UniRef50_UPI00015B43EC Cluster: PREDICTED: similar to pol-like
           protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
           similar to pol-like protein - Nasonia vitripennis
          Length = 1119

 Score = 37.9 bits (84), Expect = 0.13
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
 Frame = -2

Query: 438 VADKTFPLKNGALGFIPSPPWWDQECSDAIKKRKQVELQYCENCTSENFDLV--TDAFKA 265
           ++     L+N      P   WW++ECS AI+ RK  +L      T E F  V  T+A   
Sbjct: 254 ISTSNIRLRNNCSSSNPQCIWWNEECSKAIRLRKNAQLSIKHRFTIEKFIEVKKTEALVR 313

Query: 264 TSLYSXRKKQI 232
            +L   + K +
Sbjct: 314 KTLKEEKMKSV 324


>UniRef50_Q1ZBP6 Cluster: Putative uncharacterized protein; n=1;
           Psychromonas sp. CNPT3|Rep: Putative uncharacterized
           protein - Psychromonas sp. CNPT3
          Length = 776

 Score = 35.9 bits (79), Expect = 0.52
 Identities = 20/80 (25%), Positives = 36/80 (45%)
 Frame = -1

Query: 244 KKADSWKSFCLSISPNVCPSVVWRNIRRFRCAFTETSSGFLPASLNNQFLDRLAPSTVPE 65
           KK   W+ +  ++ P+   + +W+  RR R +     S         +F  +L P  VP 
Sbjct: 22  KKKGYWRRYVNNLDPSTSLNSLWKMARRMRNSNNINESESFSGEWLIEFAHKLCPDFVPA 81

Query: 64  RIIMPLMPLNPSGLNSPFSM 5
           +  +   P +   L+SPF+M
Sbjct: 82  QNFIQDAPGSDPMLDSPFTM 101


>UniRef50_A7BX17 Cluster: Mechanosensitive ion channel; n=1;
           Beggiatoa sp. PS|Rep: Mechanosensitive ion channel -
           Beggiatoa sp. PS
          Length = 367

 Score = 34.3 bits (75), Expect = 1.6
 Identities = 16/47 (34%), Positives = 27/47 (57%)
 Frame = -2

Query: 264 TSLYSXRKKQIAGNLFVSLFPLMSVLLWYGVILEDSGVHLLKLLLVF 124
           TS+Y     Q   NLF+ +F ++ +L+    IL + G+++L LL  F
Sbjct: 124 TSIYGPELTQSLNNLFIQIFKILLILMALTAILYEWGINVLGLLTGF 170


>UniRef50_Q4PDE2 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 1006

 Score = 32.3 bits (70), Expect = 6.4
 Identities = 17/56 (30%), Positives = 26/56 (46%)
 Frame = -1

Query: 178 WRNIRRFRCAFTETSSGFLPASLNNQFLDRLAPSTVPERIIMPLMPLNPSGLNSPF 11
           W+ +  F     E   G  PAS+   + + L PST P+R +    PLN + +   F
Sbjct: 46  WQVLGPFPAGMRELPFGGFPASVGYSYAELLDPSTNPKRHLSTYGPLNATTMLQTF 101


>UniRef50_UPI0000E47E5C Cluster: PREDICTED: similar to Low-density
           lipoprotein receptor-related protein 4 precursor
           (Multiple epidermal growth factor-like domains 7); n=2;
           Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
           Low-density lipoprotein receptor-related protein 4
           precursor (Multiple epidermal growth factor-like domains
           7) - Strongylocentrotus purpuratus
          Length = 780

 Score = 31.9 bits (69), Expect = 8.5
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = -1

Query: 145 TETSSGFLPASLNNQFLDRLAPSTVPER 62
           T +SSG LP  LNN+ LDR+ P  V  R
Sbjct: 689 THSSSGSLPNKLNNEELDRMLPPPVAYR 716


>UniRef50_UPI0000E1EF16 Cluster: PREDICTED: hypothetical protein;
           n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
           protein - Pan troglodytes
          Length = 71

 Score = 31.9 bits (69), Expect = 8.5
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = -2

Query: 408 GALGFIPSPPWWDQEC--SDA-IKKRKQVELQYCENCTSENFD 289
           GAL  +P   WW+ E   SD  I+K  Q  +  CEN   +N+D
Sbjct: 5   GALATVPRDKWWNGEKWESDGKIQKGSQSVVHLCENLKKKNWD 47


>UniRef50_A2EJF1 Cluster: LIM domain containing protein; n=4;
           Trichomonas vaginalis G3|Rep: LIM domain containing
           protein - Trichomonas vaginalis G3
          Length = 842

 Score = 31.9 bits (69), Expect = 8.5
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -1

Query: 136 SSGFLPASLNNQFLDRLAPSTVPERIIMPLMPLNPSGLNSP 14
           S G  P  L+NQF      + +P ++ M L P   SGL SP
Sbjct: 245 SGGLPPPPLSNQFSQPATSNGLPSQVTMRLPPPPSSGLQSP 285


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 498,247,762
Number of Sequences: 1657284
Number of extensions: 9460028
Number of successful extensions: 26834
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 26187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26827
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30110042232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)