Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20013
         (505 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    27   0.072
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    27   0.072
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    27   0.072
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    22   3.6  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   4.7  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   8.3  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   8.3  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   8.3  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 27.5 bits (58), Expect = 0.072
 Identities = 17/65 (26%), Positives = 24/65 (36%)
 Frame = -2

Query: 318 CENCTSENFDLVTDAFKATSLYSXRKKQIAGNLFVSLFPLMSVLLWYGVILEDSGVHLLK 139
           C N TSE FD        + ++S     I   L +    L    +W   +  D  V LL 
Sbjct: 182 CNNSTSEGFDYFFGKMSYSHIFSLMDYNIVMALVLQFITLQHTFIW---VFNDVFVMLLS 238

Query: 138 LLLVF 124
             L +
Sbjct: 239 TALAY 243


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 27.5 bits (58), Expect = 0.072
 Identities = 17/65 (26%), Positives = 24/65 (36%)
 Frame = -2

Query: 318 CENCTSENFDLVTDAFKATSLYSXRKKQIAGNLFVSLFPLMSVLLWYGVILEDSGVHLLK 139
           C N TSE FD        + ++S     I   L +    L    +W   +  D  V LL 
Sbjct: 182 CNNSTSEGFDYFFGKMSYSHIFSLMDYNIVMALVLQFITLQHTFIW---VFNDVFVMLLS 238

Query: 138 LLLVF 124
             L +
Sbjct: 239 TALAY 243


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 27.5 bits (58), Expect = 0.072
 Identities = 17/65 (26%), Positives = 24/65 (36%)
 Frame = -2

Query: 318 CENCTSENFDLVTDAFKATSLYSXRKKQIAGNLFVSLFPLMSVLLWYGVILEDSGVHLLK 139
           C N TSE FD        + ++S     I   L +    L    +W   +  D  V LL 
Sbjct: 182 CNNSTSEGFDYFFGKMSYSHIFSLMDYNIVMALVLQFITLQHTFIW---VFNDVFVMLLS 238

Query: 138 LLLVF 124
             L +
Sbjct: 239 TALAY 243


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3

Query: 365 NVRMQLKKENKLS 327
           N R +LKKENK++
Sbjct: 137 NARRRLKKENKMT 149


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -1

Query: 175 RNIRRFRCAFT 143
           +NIRR+R AFT
Sbjct: 69  QNIRRYRTAFT 79


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +3

Query: 291 QNFQMYNSHNIGAQ 332
           +NFQ Y+++N  A+
Sbjct: 144 ENFQQYDNNNFSAE 157


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +3

Query: 291 QNFQMYNSHNIGAQ 332
           +NFQ Y+++N  A+
Sbjct: 144 ENFQQYDNNNFSAE 157


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +3

Query: 291 QNFQMYNSHNIGAQ 332
           +NFQ Y+++N  A+
Sbjct: 144 ENFQQYDNNNFSAE 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,424
Number of Sequences: 336
Number of extensions: 2695
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)