Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20013
         (505 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    28   0.21 
AY146735-1|AAO12095.1|  149|Anopheles gambiae odorant-binding pr...    24   3.4  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 27.9 bits (59), Expect = 0.21
 Identities = 18/70 (25%), Positives = 30/70 (42%)
 Frame = -2

Query: 390 PSPPWWDQECSDAIKKRKQVELQYCENCTSENFDLVTDAFKATSLYSXRKKQIAGNLFVS 211
           P+PPW ++   +  K R +   +Y  N ++ NF L   A  A  LY+  + +   +   S
Sbjct: 331 PNPPWSNRTLRNLKKDRMKYLRRYRLNRSAFNFRLFKYAASAHRLYNRARFEAYSSRLQS 390

Query: 210 LFPLMSVLLW 181
            F       W
Sbjct: 391 RFRSDPASFW 400


>AY146735-1|AAO12095.1|  149|Anopheles gambiae odorant-binding
           protein AgamOBP25 protein.
          Length = 149

 Score = 23.8 bits (49), Expect = 3.4
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = -2

Query: 342 RKQVELQYCENCTSENFDLVTDAFKATSLYSXRKKQIAGN 223
           R+++E    +NC  +  D    A+K T  Y   K  + G+
Sbjct: 106 RERIE-SLVKNCNFQEADACETAYKVTECYFQNKAGLCGS 144


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 520,012
Number of Sequences: 2352
Number of extensions: 10045
Number of successful extensions: 15
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45245913
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)