Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20013
         (505 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    25   0.34 
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    25   0.34 
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    25   0.34 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   1.4  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    22   3.2  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   4.2  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   5.5  
AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           21   5.5  
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           21   5.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   9.6  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 25.4 bits (53), Expect = 0.34
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -3

Query: 368 KNVRMQLKKENKLSSNIVRIVHLK 297
           K ++    KEN+L +N+++IVH K
Sbjct: 328 KRIQYAQHKENELYANLMKIVHEK 351


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 25.4 bits (53), Expect = 0.34
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -3

Query: 368 KNVRMQLKKENKLSSNIVRIVHLK 297
           K ++    KEN+L +N+++IVH K
Sbjct: 366 KRIQYAQHKENELYANLMKIVHEK 389


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 25.4 bits (53), Expect = 0.34
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = -3

Query: 368 KNVRMQLKKENKLSSNIVRIVHLKILIWLQMLSRPLVYIXKEKSR*LEIFLSLYF 204
           K +R  L KE K S+ +  I+   I+ WL      LV    +    +  FLS  F
Sbjct: 358 KKLRFHLAKERKASTTLGIIMSAFIVCWLPFFVLALVRPFLKNPDAIPAFLSSLF 412


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -1

Query: 184 VVWRNIRRFRCAFTETSSGFLPASLNN 104
           + W  ++ F C +  T+SG   A  N+
Sbjct: 130 IQWSKLQVFDCRYVTTTSGMFEALCNH 156



 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +2

Query: 416 SGNVLSATSINNLVSASAQTDSEPCEILGR 505
           SGN +S  +  + + A++QT+    + L R
Sbjct: 552 SGNKISLATSKSFIKANSQTEVSNSKKLDR 581


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +2

Query: 254 YKLVALKASVTRSKFSDVQFSQYWSSTCFLFLIAS 358
           +  +A K   +  K S ++ S+ W   C +FL A+
Sbjct: 274 FMTLASKVENSLPKVSYIKASEIWFLGCTIFLFAA 308


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +1

Query: 391 NKAQSTIFKRKCFVSYLYK 447
           N   + +  R+C   YLYK
Sbjct: 315 NDCHAEVVARRCLCEYLYK 333


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -2

Query: 414 KNGALGFIPSPPWWD 370
           +N A GF+ +  WW+
Sbjct: 414 ENSAWGFVGNSLWWE 428


>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 144 VNAHLNLLILRHTTEGQTLGEIERQKDFQL 233
           + A L  L+ RH   GQT  E +  K+  L
Sbjct: 106 MEASLIGLVERHKKRGQTKEEFQNLKEVML 135


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 144 VNAHLNLLILRHTTEGQTLGEIERQKDFQL 233
           + A L  L+ RH   GQT  E +  K+  L
Sbjct: 106 MEASLIGLVERHKKRGQTKEEFQNLKEVML 135


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -2

Query: 477 SVCAEALTKLFIEVADKTFPLKNGALGFIPSP 382
           S C   + +L +++AD   PL        PSP
Sbjct: 855 SGCPSNMMELQVDIADSQQPLNLSKKSPSPSP 886


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,950
Number of Sequences: 438
Number of extensions: 2748
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)