Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20012
(652 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 23 1.6
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 22 3.8
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 22 3.8
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 22 5.0
AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein p... 22 5.0
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 22 5.0
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 21 6.7
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 21 6.7
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 6.7
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 6.7
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 21 6.7
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 6.7
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 23.4 bits (48), Expect = 1.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 249 NDARTISWLHQT*SCSHSEKLLR 181
N +TISWL H+E +LR
Sbjct: 354 NPIKTISWLKDGHPIDHNEAVLR 376
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 22.2 bits (45), Expect = 3.8
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 71 VLCPFQFSGSFTEKMASIPVYEEYHFETLRW 163
++ PF G F ++SIP+Y ++ L W
Sbjct: 564 LVIPFLLFGGFFLNVSSIPIYFKW-LSFLSW 593
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 22.2 bits (45), Expect = 3.8
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 71 VLCPFQFSGSFTEKMASIPVYEEYHFETLRW 163
++ PF G F ++SIP+Y ++ L W
Sbjct: 564 LVIPFLLFGGFFLNVSSIPIYFKW-LSFLSW 593
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 21.8 bits (44), Expect = 5.0
Identities = 9/31 (29%), Positives = 11/31 (35%)
Frame = +2
Query: 440 RHYRMHQQGKPTSTNPVASIYAWQEVLHTGP 532
R + MH PV Y W +V P
Sbjct: 177 RQHVMHNLSSVPQPQPVLPTYKWMQVKRNVP 207
>AF230313-1|AAF64147.1| 210|Tribolium castaneum labial protein
protein.
Length = 210
Score = 21.8 bits (44), Expect = 5.0
Identities = 9/31 (29%), Positives = 11/31 (35%)
Frame = +2
Query: 440 RHYRMHQQGKPTSTNPVASIYAWQEVLHTGP 532
R + MH PV Y W +V P
Sbjct: 177 RQHVMHNLSSVPQPQPVLPTYKWMQVKRNVP 207
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 21.8 bits (44), Expect = 5.0
Identities = 9/31 (29%), Positives = 11/31 (35%)
Frame = +2
Query: 440 RHYRMHQQGKPTSTNPVASIYAWQEVLHTGP 532
R + MH PV Y W +V P
Sbjct: 177 RQHVMHNLSSVPQPQPVLPTYKWMQVKRNVP 207
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 21.4 bits (43), Expect = 6.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 419 SAHGTVTRHYRMHQQGKP 472
S T+T+H R+H KP
Sbjct: 88 SDSSTLTKHLRIHSGEKP 105
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 21.4 bits (43), Expect = 6.7
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = +1
Query: 322 RCAVRYCCSGLRVIGNDDISIDVSRWPYRGIRIGARDGD 438
+C Y G R + ND++S I A DGD
Sbjct: 125 QCMYMYFLLGFRYLVNDELSAHSKEIRGENTYILALDGD 163
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.4 bits (43), Expect = 6.7
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = +1
Query: 322 RCAVRYCCSGLRVIGNDDISIDVSRWPYRGIRIGARDGD 438
+C Y G R + ND++S I A DGD
Sbjct: 439 QCMYMYFLLGFRYLVNDELSAHSKEIRGENTYILALDGD 477
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.4 bits (43), Expect = 6.7
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = +1
Query: 322 RCAVRYCCSGLRVIGNDDISIDVSRWPYRGIRIGARDGD 438
+C Y G R+ ND++S I A DGD
Sbjct: 672 QCMYMYFLLGFRLQANDELSAHSKEIRGENTYILALDGD 710
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 21.4 bits (43), Expect = 6.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 419 SAHGTVTRHYRMHQQGKP 472
S T+T+H R+H KP
Sbjct: 344 SDSSTLTKHLRIHSGEKP 361
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.4 bits (43), Expect = 6.7
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = +1
Query: 322 RCAVRYCCSGLRVIGNDDISIDVSRWPYRGIRIGARDGD 438
+C Y G R+ ND++S I A DGD
Sbjct: 672 QCMYMYFLLGFRLQANDELSAHSKEIRGENTYILALDGD 710
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,045
Number of Sequences: 336
Number of extensions: 3916
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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