Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbS20003
(371 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT024192-1|ABC86254.1| 786|Drosophila melanogaster RE74757p pro... 32 0.21
AL133504-2|CAB65844.1| 819|Drosophila melanogaster EG:BACH7M4.2... 32 0.21
AE014298-395|AAF45778.1| 1529|Drosophila melanogaster CG14045-PA... 32 0.21
AE014298-1352|AAF46511.2| 1003|Drosophila melanogaster CG3003-PB... 29 1.5
U86010-1|AAB95640.1| 1920|Drosophila melanogaster zinc-finger nu... 29 2.6
AY058335-1|AAL13564.1| 1893|Drosophila melanogaster GH10905p pro... 29 2.6
AL031227-3|CAA20227.1| 1891|Drosophila melanogaster EG:66A1.1,FB... 29 2.6
AE014298-646|AAX52476.1| 1894|Drosophila melanogaster CG12212-PB... 29 2.6
AE014298-645|AAF45960.2| 1894|Drosophila melanogaster CG12212-PA... 29 2.6
BT015273-1|AAT94502.1| 2064|Drosophila melanogaster LD20667p pro... 28 4.5
AY119123-1|AAM50983.1| 514|Drosophila melanogaster RE25285p pro... 28 4.5
AE014134-2380|AAN10839.1| 514|Drosophila melanogaster CG18507-P... 28 4.5
AE014134-2379|AAF53321.2| 513|Drosophila melanogaster CG18507-P... 28 4.5
AE014134-16|AAF51561.2| 2064|Drosophila melanogaster CG11376-PA ... 28 4.5
BT021450-1|AAX33598.1| 728|Drosophila melanogaster AT31458p pro... 27 6.0
AE014296-1293|AAF50536.2| 728|Drosophila melanogaster CG7716-PA... 27 6.0
BT023932-1|ABB36436.1| 836|Drosophila melanogaster RE53394p pro... 27 7.9
AE014296-193|AAF47454.1| 836|Drosophila melanogaster CG13913-PA... 27 7.9
>BT024192-1|ABC86254.1| 786|Drosophila melanogaster RE74757p
protein.
Length = 786
Score = 32.3 bits (70), Expect = 0.21
Identities = 24/79 (30%), Positives = 34/79 (43%)
Frame = -1
Query: 248 HGVPLAVFDQTLNGFLDNLSLLFLQIFRAFGDSGLVFTNDDTHIQLSASTSSVLGASVAL 69
H V LN S L L+IFR G T+ D Q + S+ LGA+V L
Sbjct: 655 HNVVTMPEADVLNLIRSQGSSLTLEIFRRSGAGATTITSTDLG-QNNVHISTRLGAAVGL 713
Query: 68 EASAHTARTKANKVSLILA 12
+ HT T A + +++
Sbjct: 714 GSEEHTLATTATGTTTVMS 732
>AL133504-2|CAB65844.1| 819|Drosophila melanogaster EG:BACH7M4.2
protein.
Length = 819
Score = 32.3 bits (70), Expect = 0.21
Identities = 24/79 (30%), Positives = 34/79 (43%)
Frame = -1
Query: 248 HGVPLAVFDQTLNGFLDNLSLLFLQIFRAFGDSGLVFTNDDTHIQLSASTSSVLGASVAL 69
H V LN S L L+IFR G T+ D Q + S+ LGA+V L
Sbjct: 688 HNVVTMPEADVLNLIRSQGSSLTLEIFRRSGAGATTITSTDLG-QNNVHISTRLGAAVGL 746
Query: 68 EASAHTARTKANKVSLILA 12
+ HT T A + +++
Sbjct: 747 GSEEHTLATTATGTTTVMS 765
>AE014298-395|AAF45778.1| 1529|Drosophila melanogaster CG14045-PA
protein.
Length = 1529
Score = 32.3 bits (70), Expect = 0.21
Identities = 24/79 (30%), Positives = 34/79 (43%)
Frame = -1
Query: 248 HGVPLAVFDQTLNGFLDNLSLLFLQIFRAFGDSGLVFTNDDTHIQLSASTSSVLGASVAL 69
H V LN S L L+IFR G T+ D Q + S+ LGA+V L
Sbjct: 691 HNVVTMPEADVLNLIRSQGSSLTLEIFRRSGAGATTITSTDLG-QNNVHISTRLGAAVGL 749
Query: 68 EASAHTARTKANKVSLILA 12
+ HT T A + +++
Sbjct: 750 GSEEHTLATTATGTTTVMS 768
>AE014298-1352|AAF46511.2| 1003|Drosophila melanogaster CG3003-PB
protein.
Length = 1003
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -1
Query: 131 DDTHIQLSASTSSVLGASVALEASAHTAR 45
D+ + +A+ S+LGA+ AL+ASAH R
Sbjct: 253 DEEEDEEAAAVESLLGAAAALQASAHVQR 281
>U86010-1|AAB95640.1| 1920|Drosophila melanogaster zinc-finger
nuclear protein hindsightprotein.
Length = 1920
Score = 28.7 bits (61), Expect = 2.6
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +3
Query: 45 PRRVC--AGF*RHTCTKN**RTGGQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKR 218
P VC A RH T N G + Y V T A C +L+ + G+ +E VKR
Sbjct: 747 PYAVCDKAALVRHMRTHN----GDRPYECAVCNYAFTTKANCERHLRNRHGKTSREEVKR 802
Query: 219 LI 224
I
Sbjct: 803 AI 804
>AY058335-1|AAL13564.1| 1893|Drosophila melanogaster GH10905p
protein.
Length = 1893
Score = 28.7 bits (61), Expect = 2.6
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +3
Query: 45 PRRVC--AGF*RHTCTKN**RTGGQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKR 218
P VC A RH T N G + Y V T A C +L+ + G+ +E VKR
Sbjct: 747 PYAVCDKAALVRHMRTHN----GDRPYECAVCNYAFTTKANCERHLRNRHGKTSREEVKR 802
Query: 219 LI 224
I
Sbjct: 803 AI 804
>AL031227-3|CAA20227.1| 1891|Drosophila melanogaster
EG:66A1.1,FBgn0003053;peb protein.
Length = 1891
Score = 28.7 bits (61), Expect = 2.6
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +3
Query: 45 PRRVC--AGF*RHTCTKN**RTGGQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKR 218
P VC A RH T N G + Y V T A C +L+ + G+ +E VKR
Sbjct: 747 PYAVCDKAALVRHMRTHN----GDRPYECAVCNYAFTTKANCERHLRNRHGKTSREEVKR 802
Query: 219 LI 224
I
Sbjct: 803 AI 804
>AE014298-646|AAX52476.1| 1894|Drosophila melanogaster CG12212-PB,
isoform B protein.
Length = 1894
Score = 28.7 bits (61), Expect = 2.6
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +3
Query: 45 PRRVC--AGF*RHTCTKN**RTGGQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKR 218
P VC A RH T N G + Y V T A C +L+ + G+ +E VKR
Sbjct: 747 PYAVCDKAALVRHMRTHN----GDRPYECAVCNYAFTTKANCERHLRNRHGKTSREEVKR 802
Query: 219 LI 224
I
Sbjct: 803 AI 804
>AE014298-645|AAF45960.2| 1894|Drosophila melanogaster CG12212-PA,
isoform A protein.
Length = 1894
Score = 28.7 bits (61), Expect = 2.6
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +3
Query: 45 PRRVC--AGF*RHTCTKN**RTGGQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKR 218
P VC A RH T N G + Y V T A C +L+ + G+ +E VKR
Sbjct: 747 PYAVCDKAALVRHMRTHN----GDRPYECAVCNYAFTTKANCERHLRNRHGKTSREEVKR 802
Query: 219 LI 224
I
Sbjct: 803 AI 804
>BT015273-1|AAT94502.1| 2064|Drosophila melanogaster LD20667p protein.
Length = 2064
Score = 27.9 bits (59), Expect = 4.5
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -2
Query: 217 RLTASLITSPFFSFRYSEHLA---IAVSYSPMTTLIYSCPPVRHQ 92
R +L+TS RYSE A +A Y P+ +++ C P HQ
Sbjct: 1166 RCIRNLMTSHDLDARYSETDARARVAALYIPLLSIVMDCIPQLHQ 1210
>AY119123-1|AAM50983.1| 514|Drosophila melanogaster RE25285p
protein.
Length = 514
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -1
Query: 143 VFTNDDTHIQLSASTSSVL-GASVALEASAH 54
V T + TH+ LSAS S ++ GAS AS +
Sbjct: 127 VLTTESTHVNLSASGSGIVSGASANASASGY 157
>AE014134-2380|AAN10839.1| 514|Drosophila melanogaster CG18507-PA,
isoform A protein.
Length = 514
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -1
Query: 143 VFTNDDTHIQLSASTSSVL-GASVALEASAH 54
V T + TH+ LSAS S ++ GAS AS +
Sbjct: 127 VLTTESTHVNLSASGSGIVSGASANASASGY 157
>AE014134-2379|AAF53321.2| 513|Drosophila melanogaster CG18507-PB,
isoform B protein.
Length = 513
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = -1
Query: 143 VFTNDDTHIQLSASTSSVL-GASVALEASAH 54
V T + TH+ LSAS S ++ GAS AS +
Sbjct: 127 VLTTESTHVNLSASGSGIVSGASANASASGY 157
>AE014134-16|AAF51561.2| 2064|Drosophila melanogaster CG11376-PA
protein.
Length = 2064
Score = 27.9 bits (59), Expect = 4.5
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -2
Query: 217 RLTASLITSPFFSFRYSEHLA---IAVSYSPMTTLIYSCPPVRHQ 92
R +L+TS RYSE A +A Y P+ +++ C P HQ
Sbjct: 1166 RCIRNLMTSHDLDARYSETDARARVAALYIPLLSIVMDCIPQLHQ 1210
>BT021450-1|AAX33598.1| 728|Drosophila melanogaster AT31458p
protein.
Length = 728
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 135 GEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDF 254
G ET + KC EYLK +I E ++ L+ + DF
Sbjct: 417 GFSETFLHKCHEYLKYNVERLIPEKLQTLLAETLHKSNDF 456
>AE014296-1293|AAF50536.2| 728|Drosophila melanogaster CG7716-PA
protein.
Length = 728
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 135 GEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDF 254
G ET + KC EYLK +I E ++ L+ + DF
Sbjct: 417 GFSETFLHKCHEYLKYNVERLIPEKLQTLLAETLHKSNDF 456
>BT023932-1|ABB36436.1| 836|Drosophila melanogaster RE53394p
protein.
Length = 836
Score = 27.1 bits (57), Expect = 7.9
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 297 DLTISFPSFVHNWXGSP 247
DL +SFPSFV + G+P
Sbjct: 153 DLRVSFPSFVQEFVGTP 169
>AE014296-193|AAF47454.1| 836|Drosophila melanogaster CG13913-PA
protein.
Length = 836
Score = 27.1 bits (57), Expect = 7.9
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 297 DLTISFPSFVHNWXGSP 247
DL +SFPSFV + G+P
Sbjct: 153 DLRVSFPSFVQEFVGTP 169
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,052,315
Number of Sequences: 53049
Number of extensions: 304111
Number of successful extensions: 790
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 984962268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -