Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32608
(307 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 31 0.038
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 29 0.12
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 28 0.27
SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protei... 28 0.36
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 27 0.47
SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Ma... 27 0.47
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 27 0.47
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 26 1.4
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 25 1.9
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 25 1.9
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 25 1.9
SPAC9.11 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Ma... 25 1.9
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 25 1.9
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 25 2.5
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 25 2.5
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 25 2.5
SPBC2A9.08c |sec22||SNARE Sec22|Schizosaccharomyces pombe|chr 2|... 25 2.5
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 25 2.5
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 25 3.3
SPCC126.14 |prp18||U5 snRNP-associated protein Prp18|Schizosacch... 25 3.3
SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|ch... 25 3.3
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 25 3.3
SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual 24 4.4
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 24 4.4
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 24 4.4
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 24 5.8
SPCC1672.02c |sap1||switch-activating protein Sap1|Schizosacchar... 24 5.8
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 24 5.8
SPAC27F1.04c |nuf2||spindle pole body protein Nuf2|Schizosacchar... 24 5.8
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 24 5.8
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 23 7.7
SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr... 23 7.7
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo... 23 7.7
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 23 7.7
SPAC6B12.05c |||chromatin remodeling complex subunit |Schizosacc... 23 7.7
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 31.1 bits (67), Expect = 0.038
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +1
Query: 115 DNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKE 294
D +K + + +A RAE +++E++ +L+ E++ K E A LEE E
Sbjct: 2 DKLREKINAARAETDEAVARAEAAEAKLKEVELQLSLKEQEYESLSRKSEAAESQLEELE 61
Query: 295 KQ 300
++
Sbjct: 62 EE 63
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.5 bits (63), Expect = 0.12
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 106 LEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKK 216
LEKD K + QQ ++NLR + + E+ E++K+
Sbjct: 243 LEKDALQRKVSSLSQQFTESNLRYQNIVAELSEMRKQ 279
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 28.3 bits (60), Expect = 0.27
Identities = 17/60 (28%), Positives = 34/60 (56%)
Frame = +1
Query: 121 AMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQ 300
A +KA ++ R A A+ E+ +E QK Q E+D + +KN++++ K +E +++
Sbjct: 251 AREKAREARRR-RSAQNSAKLEKEKAKEKQKDKDQ-EQDTVSDKNQIDEIEKGQKEVDEE 308
>SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1462
Score = 27.9 bits (59), Expect = 0.36
Identities = 14/58 (24%), Positives = 27/58 (46%)
Frame = +1
Query: 94 QAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQ 267
Q LEK+N + + E + +L +++ + ++ LAQ E L+ N L +
Sbjct: 900 QGTSLEKENEEEGKNPVESNCSEESLDDHNIDQTLVNKKETLAQDSESLLQKNNALNE 957
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.5 bits (58), Expect = 0.47
Identities = 17/66 (25%), Positives = 34/66 (51%)
Frame = +1
Query: 94 QAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQAN 273
+A K ++ + + +QQ + R EK ++ +E +KKL + +++ K EQ
Sbjct: 636 EARKKREEQRLKREQEKKQQELERQKREEK--QKQKEREKKLKKQQQEADREKMAREQRL 693
Query: 274 KDLEEK 291
++ EEK
Sbjct: 694 REEEEK 699
>SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 358
Score = 27.5 bits (58), Expect = 0.47
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = +2
Query: 35 STGTVTTKSRHHGTXXXXXXXXXXXXXTMPWTRPTPANSRLETPTSVLRR*TRKSANSRR 214
S T++T S T T+P T P P S T +S+L T S++S
Sbjct: 87 SNSTISTSSSTPITASVPTSSSILSNSTIPTTSPVPTTSSTPTSSSILSNSTIPSSSSIS 146
Query: 215 SS 220
+S
Sbjct: 147 AS 148
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 27.5 bits (58), Expect = 0.47
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +1
Query: 91 MQAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRE---LQKKLAQVEEDLILNKNKL 261
++ KLE+ + K D + L+ K+N +V E L+K + + ED L K KL
Sbjct: 837 IERTKLEETSFKKKIDDAVLANNEQKLKLTKLNFQVNELEQLEKDINKSSEDCDLQKKKL 896
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 25.8 bits (54), Expect = 1.4
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 199 RELQKKLAQVEEDLILNKNKLEQANKDLE-EKEKQ 300
RE++ L + + DLI +KN+L QA E EK K+
Sbjct: 431 REMKAALEKQKADLIDHKNRLMQAKAAAENEKSKR 465
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 25.4 bits (53), Expect = 1.9
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +1
Query: 136 DTCEQQARDANLRAEKVNEEV 198
D C++ +DANL+ ++NE +
Sbjct: 361 DPCKRALKDANLQTSEINEVI 381
Score = 24.2 bits (50), Expect = 4.4
Identities = 14/63 (22%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +1
Query: 94 QAMKLEKDNAMDKADTCEQ-QARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQA 270
QA++ + D +T + A D + +E + +++ E+Q+ +V E + N+N+ ++
Sbjct: 603 QAVEDLRSKITDLRETVAKVNAGDEGITSEDMKKKIDEIQQLSLKVFESVYKNQNQGNES 662
Query: 271 NKD 279
+ D
Sbjct: 663 SGD 665
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 25.4 bits (53), Expect = 1.9
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +1
Query: 178 EKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQ 300
EK E + ++ A++E + + EQA ++ EEK K+
Sbjct: 539 EKAEAEAKRKAEEKARLEAEENAKREAEEQAKREAEEKAKR 579
Score = 24.6 bits (51), Expect = 3.3
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 134 PTPANSRLETPTSVLRR*TRKSANSRRSS 220
P+ NSR ETPT+ + + + A+ R+ +
Sbjct: 500 PSETNSRAETPTAAPPQISEEEASQRKDA 528
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 25.4 bits (53), Expect = 1.9
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +1
Query: 112 KDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEK 291
KD+ + + + +NLRA E +KKL E + N+ L AN L E
Sbjct: 280 KDDTFNDYSSASMELNTSNLRARASFSNFMENEKKL---YEKVNTNRTLLRNANLTLNEA 336
Query: 292 EK 297
++
Sbjct: 337 QQ 338
Score = 23.8 bits (49), Expect = 5.8
Identities = 11/48 (22%), Positives = 27/48 (56%)
Frame = +1
Query: 124 MDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQ 267
M++ D +++ + + ++ V ELQ ++ ++ED + +KLE+
Sbjct: 856 MEQYDARKKEIEELESKMSDFDQSVEELQDEMNSIKEDWV---SKLEE 900
>SPAC9.11 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 328
Score = 25.4 bits (53), Expect = 1.9
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +1
Query: 178 EKVNEEVRELQKKLAQVEEDLILNKNKLEQA 270
E + +E++E + LAQ EE++ K+KL+ A
Sbjct: 295 EPLKKELQETKTLLAQKEEEISNLKDKLQNA 325
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 25.4 bits (53), Expect = 1.9
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +1
Query: 139 TCEQQARDANLRAEKVNEEVRELQKK---LAQVEEDLILNKNKLEQANKDLEEKEK 297
T +Q +D + + +++ E ++K L+ DL KLE++NK L +K++
Sbjct: 627 TITKQLKDTSSKLQQLQLERANFEQKESTLSDENNDLRTKLLKLEESNKSLIKKQE 682
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 25.0 bits (52), Expect = 2.5
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 178 EKVNEEVRELQKKLAQVEEDLILNK 252
EK+N+ E K++ QVE D++LNK
Sbjct: 528 EKINQLTSE--KQILQVELDMLLNK 550
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 25.0 bits (52), Expect = 2.5
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Frame = +1
Query: 124 MDKADTCEQQARD--ANLRAEKVNEEVRELQKKLAQVEEDLILN---KNKLEQAN 273
M+ T ++ D +NL+ E+ N+E+ L KKL + E L N K+++E+ N
Sbjct: 710 MESVTTSKESLADYLSNLK-ERHNDELDSLNKKLREFEGILSSNSSLKSEIEERN 763
Score = 24.6 bits (51), Expect = 3.3
Identities = 16/72 (22%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Frame = +1
Query: 97 AMKLEKDNAMDKADTCEQQARDA----NLRAEKVNEEVRELQKKLAQVEEDLILNKNKLE 264
A+ K NA+ +A++ + + D+ ++ ++ + E+ L K+L +EED ++E
Sbjct: 468 ALNSGKMNAIVEAESSKNELWDSMMVSRMKTQEQSIELTRLYKQLQDIEEDYENKLMRME 527
Query: 265 QA-NKDLEEKEK 297
Q +D+++ ++
Sbjct: 528 QQWREDVDQLQE 539
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 25.0 bits (52), Expect = 2.5
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +1
Query: 202 ELQKKLAQVEEDLILNKNKLEQANKDLEEKEK 297
+L KK Q E+D+ +NKL + ++K K
Sbjct: 517 QLAKKARQQEKDMAKLQNKLNMTGSEQQKKAK 548
Score = 23.8 bits (49), Expect = 5.8
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +1
Query: 100 MKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKD 279
+K+ + + A QQ +D K+N E QKK + + K +Q+ K
Sbjct: 508 LKVRAERDVQLAKKARQQEKDMAKLQNKLNMTGSEQQKKAKAKVKAMNKKLEKDKQSGKV 567
Query: 280 LEEK 291
L+E+
Sbjct: 568 LDEE 571
>SPBC2A9.08c |sec22||SNARE Sec22|Schizosaccharomyces pombe|chr
2|||Manual
Length = 209
Score = 25.0 bits (52), Expect = 2.5
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +1
Query: 115 DNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQ 267
D M K+ R AN +K+N E++++ + + + EDL+ + LE+
Sbjct: 109 DTFMQKSKRVYNTPR-ANDNLDKLNTELKDVTRVMTKNIEDLLYRGDSLEK 158
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.0 bits (52), Expect = 2.5
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = -1
Query: 295 SPSLQGPCWPAPVCSCSGSGLPPPGRASSGVRGLP 191
+P + P AP SG+PP + ++GV +P
Sbjct: 1158 APPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVP 1192
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 24.6 bits (51), Expect = 3.3
Identities = 16/67 (23%), Positives = 37/67 (55%)
Frame = +1
Query: 100 MKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKD 279
MK +D +K +T Q + E+++EE+R L+++ + N+N+ +++++
Sbjct: 500 MKKLQDENSEKTETIAQLEQII----EELHEELRSLEEESIKESSATQQNENQHKRSSRK 555
Query: 280 LEEKEKQ 300
L ++KQ
Sbjct: 556 LLYEDKQ 562
>SPCC126.14 |prp18||U5 snRNP-associated protein
Prp18|Schizosaccharomyces pombe|chr 3|||Manual
Length = 343
Score = 24.6 bits (51), Expect = 3.3
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +1
Query: 139 TCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKE 294
T E + A R + E ++ ++ Q +E L K KLE+ EEK+
Sbjct: 18 TSELPVKKAFRRGDWEKEREKKYLQEKQQKDEQRELKKRKLEEERLKYEEKK 69
>SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 299
Score = 24.6 bits (51), Expect = 3.3
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 190 EEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQ 300
EE++ +KKL + E++ K K + LEE +K+
Sbjct: 94 EEIQGCEKKLESLYEEVAKAKAKAVEDQLALEEADKE 130
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 24.6 bits (51), Expect = 3.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 295 SPSLQGPCWPAPVCSCSGSGLPPP 224
+P + GP P P +G+G PPP
Sbjct: 755 APIMGGPPPPPPPPGVAGAGPPPP 778
>SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 706
Score = 24.2 bits (50), Expect = 4.4
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 229 PPGRASSGVRGLPRLPSQHGG 167
P G S G GL R+P+QH G
Sbjct: 608 PMGTDSFGNIGLTRVPTQHTG 628
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 24.2 bits (50), Expect = 4.4
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +1
Query: 91 MQAMKLEKDN-AMDKADTCEQQARDANLRAEKVNEEVR-ELQKKLAQVEEDLILNKNKLE 264
++A K E D A+ K + + + + E N + L++K EE ++N
Sbjct: 374 VEAEKTETDEPAVGKGASDVSDTAEISEKTEAKNADSEANLEEKSDVGEEKESKDENNKA 433
Query: 265 QANKDLEEKEKQXT 306
+KD+EEK+ + T
Sbjct: 434 SLHKDVEEKDTKIT 447
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 24.2 bits (50), Expect = 4.4
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +1
Query: 100 MKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKD 279
M E+ + D A ++A+ + AEK+ E + ++ EDLI NK + KD
Sbjct: 633 MLTERFYSDDTARNALKEAKASRAMAEKMVIERDAMAAQVNLGAEDLIAKLNKEVEDQKD 692
Query: 280 LEEKEKQ 300
+ +K+
Sbjct: 693 VILSQKR 699
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 23.8 bits (49), Expect = 5.8
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 192 GSPRTPEEARPGGGRPDPEQE 254
G RTPEE R G P P+++
Sbjct: 93 GEKRTPEEPRKLPGVPAPQKQ 113
>SPCC1672.02c |sap1||switch-activating protein
Sap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 254
Score = 23.8 bits (49), Expect = 5.8
Identities = 10/38 (26%), Positives = 23/38 (60%)
Frame = +1
Query: 187 NEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEKQ 300
N+E+ E KKL + ++++ + K+ +K L + E++
Sbjct: 143 NDEINERLKKLTEEQQNVDMLVAKVNFLSKHLHDNEEK 180
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 23.8 bits (49), Expect = 5.8
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +1
Query: 148 QQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEK 297
++A + E+ + R +Q+K A+VEE L + ++E L ++K
Sbjct: 166 EEASGTRMFEERKEKAFRTMQRKEAKVEEINTLLREEIEPRLTKLRTEKK 215
>SPAC27F1.04c |nuf2||spindle pole body protein
Nuf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 23.8 bits (49), Expect = 5.8
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 163 ANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEK 291
A LR E++ + ++QK+ E L+ L+ KDLEEK
Sbjct: 124 AKLREERLQQFDDDIQKR-----ESLLETYTLLDAQRKDLEEK 161
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 23.8 bits (49), Expect = 5.8
Identities = 9/35 (25%), Positives = 24/35 (68%)
Frame = +1
Query: 181 KVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLE 285
++ ++V LQK++A+ + L LNK + ++++++
Sbjct: 413 ELRQKVSILQKRIAEESKQLALNKEVRKISSREIK 447
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 23.4 bits (48), Expect = 7.7
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +1
Query: 145 EQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEK 291
E D + + E ELQ+KLA+ E + +L K LEE+
Sbjct: 65 ENLKNDLKRKELEFEREQIELQRKLAEEHEQKNSLQLRLTLVEKQLEEQ 113
>SPCC1919.10c |myo52||myosin type V|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1516
Score = 23.4 bits (48), Expect = 7.7
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +1
Query: 109 EKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANK 276
EK+NA+ + +Q DAN +VN L+ +L + ++ ++L++ N+
Sbjct: 996 EKENALIMMEEEMRQVNDANTELLRVN---ATLKSQLKNYDMIIVEQTSQLKEKNR 1048
>SPBC11C11.02 |imp2||contractile ring protein
Imp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 670
Score = 23.4 bits (48), Expect = 7.7
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 184 VNEEVRELQKKLAQVEEDLILNKNKLEQ 267
+NEE+R + A +EED KL +
Sbjct: 43 INEELRSFYHERANIEEDYAKRMAKLSR 70
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 23.4 bits (48), Expect = 7.7
Identities = 9/37 (24%), Positives = 19/37 (51%)
Frame = +1
Query: 172 RAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDL 282
+ + ++E REL+K ++ + L + N+DL
Sbjct: 637 KMKSIDESTRELEKNYEVYRNEMTAIQESLSKRNQDL 673
>SPAC6B12.05c |||chromatin remodeling complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 295
Score = 23.4 bits (48), Expect = 7.7
Identities = 11/38 (28%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 190 EEVRE-LQKKLAQVEEDLILNKNKLEQANKDLEEKEKQ 300
+E+ E L++ EED+I ++ + ++LEE+E++
Sbjct: 51 QEIEEALEEDDTNYEEDIIDDEESAQVDEEELEEEEEE 88
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.130 0.341
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 939,661
Number of Sequences: 5004
Number of extensions: 15567
Number of successful extensions: 112
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 112
length of database: 2,362,478
effective HSP length: 63
effective length of database: 2,047,226
effective search space used: 77794588
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -