Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32608
         (307 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.21 
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    26   0.28 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   0.49 
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   0.64 
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    24   1.1  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   1.1  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   2.0  
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    23   2.0  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   2.6  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           22   6.0  
AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.           22   6.0  
AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.           22   6.0  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    21   7.9  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    21   7.9  
AM085517-1|CAJ30215.1|  339|Anopheles gambiae putative angiotens...    21   7.9  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 19/69 (27%), Positives = 41/69 (59%)
 Frame = +1

Query: 94  QAMKLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQAN 273
           + MKLE+++   +    E++AR+A   A +  E+ REL+++  + + +    K + E+  
Sbjct: 439 ERMKLEEEHRAARLRE-EERAREAREAAIE-REKERELREQREREQRE----KEQREKEQ 492

Query: 274 KDLEEKEKQ 300
           ++ EE+E+Q
Sbjct: 493 REKEERERQ 501


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = +1

Query: 103 KLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDL-ILNKNKLEQANKD 279
           K + +  +      E+Q +   L+ E  NE+++E Q++  +  ED  +      E+  K+
Sbjct: 79  KADNETTVGIVKRLEEQIQLLRLQMEASNEQLKEAQREAREAREDARVREAEHREELRKE 138

Query: 280 LE 285
            E
Sbjct: 139 KE 140


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 186 KRGSPRTPEEARPGGGRPDP 245
           + G+P  P+  RPGG  P P
Sbjct: 202 RTGTPTQPQPPRPGGMYPQP 221



 Score = 24.2 bits (50), Expect = 1.1
 Identities = 15/44 (34%), Positives = 18/44 (40%)
 Frame = +3

Query: 162 RQPPC*EGKRGSPRTPEEARPGGGRPDPEQEQTGAGQQGP*REG 293
           R PP     + +P   + ARP  G P   Q     G  GP R G
Sbjct: 163 RPPPI--AHQQAPFAMDPARPNPGMPPGPQMMRPPGNVGPPRTG 204



 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 165 QPPC*EGKRGSPRTPEEARPGGGRPDPEQ 251
           QPP   G+  +P       PGGGR + ++
Sbjct: 494 QPPP-GGRPNAPNPSSAVTPGGGRAEGDK 521


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.0 bits (52), Expect = 0.64
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
 Frame = -1

Query: 292 PSLQGPCWPAPVCSCSGSGLPPP--GRASSGVRGLPRLPSQHG 170
           P L+GP  P       G G P P   +   G+ G+  LP  +G
Sbjct: 331 PGLEGPSGPKGDAGVPGYGRPGPQGEKGDIGLTGVNGLPGLNG 373


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/45 (26%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = +1

Query: 157 RDANLRAEKVNEEVRELQKKLAQVEEDL--ILNKNKLEQANKDLE 285
           R++  + EK++E +R ++ +L  +EE+   +    K ++A + LE
Sbjct: 180 RESEGKLEKISEYLRTIEDRLKTLEEEKEELSEYQKWDKARRTLE 224



 Score = 22.6 bits (46), Expect = 3.4
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = +1

Query: 160  DANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQANKDLEEKEK 297
            DA+ +   +    +EL+K    +++   +NK  L+Q     E+KEK
Sbjct: 953  DASYQKMSLKSLFKELEKANQHLKKYNHVNKKALDQFLSFSEQKEK 998


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 15/66 (22%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
 Frame = +1

Query: 103 KLEKDNAMDKADTCEQQARDANLRAEKVNEEVRELQKKLAQVEEDLILNKNKLEQAN--- 273
           +L++ + M   +    + R A    ++  EE+ EL KK+  +++ ++  +    Q +   
Sbjct: 712 QLKEQHDMLNYELNNLKQRLAQTSFQQTKEEIEELNKKIETLQKTIVEARETQTQCSAKV 771

Query: 274 KDLEEK 291
           KDL+ K
Sbjct: 772 KDLQAK 777


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +3

Query: 195 SPRTPEEARPGGG 233
           SP+ PEEA  GGG
Sbjct: 901 SPKDPEEAAVGGG 913


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/25 (32%), Positives = 18/25 (72%)
 Frame = +1

Query: 160 DANLRAEKVNEEVRELQKKLAQVEE 234
           +AN R E++NEE+ +++  + + +E
Sbjct: 14  EANARNERINEELTQMRILMTKQQE 38


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
 Frame = +1

Query: 151 QARDANLRA--EKVNEEVRELQKKLAQVEEDL-ILNKNKLEQA--NKDLEEKEK 297
           QA+ A +       +E V  +QK   Q+E+DL   N++ L Q    K   E EK
Sbjct: 395 QAKQAAIERGMRNASERVTRIQKDARQIEQDLQERNRDGLSQVEQRKQAVETEK 448


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 195 SPRTPEEARPGGGRPDPEQEQ 257
           +P T      GGG P P+Q+Q
Sbjct: 213 TPLTVNGTVNGGGVPHPQQQQ 233


>AY344835-1|AAR05806.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 268 PAPVCSCSGSGLPPP 224
           PAP  + + S LPPP
Sbjct: 199 PAPTTTTTWSDLPPP 213


>AY344834-1|AAR05805.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 268 PAPVCSCSGSGLPPP 224
           PAP  + + S LPPP
Sbjct: 199 PAPTTTTTWSDLPPP 213


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 207 PEEARPGGGRPDPEQEQTGAGQQGP*REG 293
           P    P   RP P QE + +G+Q P R G
Sbjct: 427 PVRPTPSVPRPLPSQEASPSGEQ-PGRMG 454


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 226 PGRASSGVRGLPRLPSQHG 170
           PG A  G  G P LP + G
Sbjct: 535 PGDAKEGRPGAPGLPGRDG 553


>AM085517-1|CAJ30215.1|  339|Anopheles gambiae putative angiotensin
           converting enzymeprecursor protein.
          Length = 339

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 228 GGRPDPEQEQTGAGQQGP 281
           GGR  P+    G GQ+ P
Sbjct: 214 GGRNPPDPNYRGPGQRDP 231


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.130    0.341 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 250,349
Number of Sequences: 2352
Number of extensions: 4829
Number of successful extensions: 32
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 19992474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)