Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32598
         (337 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79755-1|CAB02111.2|  358|Caenorhabditis elegans Hypothetical pr...   118   1e-27
Z81046-1|CAB02822.1|  379|Caenorhabditis elegans Hypothetical pr...    49   7e-07
Z46242-1|CAA86325.2|  396|Caenorhabditis elegans Hypothetical pr...    48   1e-06
AC006610-5|AAK85453.1|  373|Caenorhabditis elegans Hypothetical ...    45   2e-05
Z73102-2|CAB63428.1|  341|Caenorhabditis elegans Hypothetical pr...    27   3.3  
Z73102-1|CAA97419.1|  298|Caenorhabditis elegans Hypothetical pr...    27   3.3  
AF100672-2|AAP40518.1|  156|Caenorhabditis elegans Groundhog (he...    27   4.4  
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr...    26   5.8  
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr...    26   5.8  
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr...    26   5.8  
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr...    26   5.8  
U64849-5|AAC48055.1|  174|Caenorhabditis elegans Saposin-like pr...    26   5.8  
U39851-7|AAM81115.1|  668|Caenorhabditis elegans Proteasome regu...    26   5.8  
U39851-6|AAM81116.1|  965|Caenorhabditis elegans Proteasome regu...    26   5.8  
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr...    26   5.8  
AF045643-2|AAC02596.2|  663|Caenorhabditis elegans Hypothetical ...    26   5.8  
AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical ...    26   5.8  
X59156-8|CAB56746.1|  103|Caenorhabditis elegans transposase pro...    26   7.7  
U58760-9|AAK31465.1|  654|Caenorhabditis elegans Dishevelled rel...    26   7.7  

>Z79755-1|CAB02111.2|  358|Caenorhabditis elegans Hypothetical
           protein F43G9.1 protein.
          Length = 358

 Score =  118 bits (284), Expect = 1e-27
 Identities = 58/101 (57%), Positives = 75/101 (74%), Gaps = 1/101 (0%)
 Frame = +1

Query: 37  MAARIIRKIVPATRAGAAQYSTG-VRKVTLIPGHGIGPEITVAVQKIFEAAKVPIEWEEV 213
           M  + I+K   +T   + +YS+G VR+VTLIPG GIGPEI+ +VQKIFEAA  PI W+ V
Sbjct: 1   MLGKCIKK-ASSTVGQSIRYSSGDVRRVTLIPGDGIGPEISASVQKIFEAADAPIAWDPV 59

Query: 214 DVTAVRGPDGKFGIPQKAIDSVNANKIGLKGPLMTPXGKGY 336
           DVT V+G DG F IP + I+ ++ANK+GLKGPL TP GKG+
Sbjct: 60  DVTPVKGRDGVFRIPSRCIELMHANKVGLKGPLETPIGKGH 100


>Z81046-1|CAB02822.1|  379|Caenorhabditis elegans Hypothetical
           protein C37E2.1 protein.
          Length = 379

 Score = 49.2 bits (112), Expect = 7e-07
 Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
 Frame = +1

Query: 112 KVTLIPGHGIGPEITVAVQKIFEAAKVPIEWEEVDVTAVRGPDGKFGIPQKAIDSVNA-N 288
           KVT+IPG G+GPE+   VQ I +   +PIE+EE+ ++ V     +    + A++S+   N
Sbjct: 44  KVTIIPGDGVGPELIYTVQDIVKQTGIPIEFEEIFLSEVHYT--RSSSIENAVESIGRNN 101

Query: 289 KIGLKGPL 312
            + LKG +
Sbjct: 102 NVALKGAI 109


>Z46242-1|CAA86325.2|  396|Caenorhabditis elegans Hypothetical
           protein F35G12.2 protein.
          Length = 396

 Score = 48.4 bits (110), Expect = 1e-06
 Identities = 26/77 (33%), Positives = 44/77 (57%)
 Frame = +1

Query: 88  AQYSTGVRKVTLIPGHGIGPEITVAVQKIFEAAKVPIEWEEVDVTAVRGPDGKFGIPQKA 267
           A+Y  G   VT++PG GIGPE+   V++I  A + P+++E V++T+            +A
Sbjct: 46  ARYG-GRHNVTVLPGDGIGPEMLHHVERILSAVQAPVDFEVVNLTSKEDASEDLA---EA 101

Query: 268 IDSVNANKIGLKGPLMT 318
           I ++  N + LKG + T
Sbjct: 102 ITAIKRNGVALKGNIET 118


>AC006610-5|AAK85453.1|  373|Caenorhabditis elegans Hypothetical
           protein C30F12.7 protein.
          Length = 373

 Score = 44.8 bits (101), Expect = 2e-05
 Identities = 28/85 (32%), Positives = 42/85 (49%)
 Frame = +1

Query: 64  VPATRAGAAQYSTGVRKVTLIPGHGIGPEITVAVQKIFEAAKVPIEWEEVDVTAVRGPDG 243
           +P  R   A+Y  G   V  +PG GIGPE+   ++ IF     P+ +EEV V++    DG
Sbjct: 22  IPGHRLPLAKYG-GRHTVCALPGDGIGPEMIAHIRNIFSFCHAPVNFEEVQVSSSL-LDG 79

Query: 244 KFGIPQKAIDSVNANKIGLKGPLMT 318
                  AI+    N + +KG + T
Sbjct: 80  DMDAAMLAIE---RNGVAIKGNIET 101


>Z73102-2|CAB63428.1|  341|Caenorhabditis elegans Hypothetical
           protein B0035.1b protein.
          Length = 341

 Score = 27.1 bits (57), Expect = 3.3
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 308 GPFKPILLAFTESIAFWGIPNLPSGP 231
           GP  P  + F +   F G+P +PSGP
Sbjct: 108 GPPMPTPMPFPQHFPFPGMPPMPSGP 133


>Z73102-1|CAA97419.1|  298|Caenorhabditis elegans Hypothetical
           protein B0035.1a protein.
          Length = 298

 Score = 27.1 bits (57), Expect = 3.3
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 308 GPFKPILLAFTESIAFWGIPNLPSGP 231
           GP  P  + F +   F G+P +PSGP
Sbjct: 108 GPPMPTPMPFPQHFPFPGMPPMPSGP 133


>AF100672-2|AAP40518.1|  156|Caenorhabditis elegans Groundhog
           (hedgehog-like family)protein 13 protein.
          Length = 156

 Score = 26.6 bits (56), Expect = 4.4
 Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
 Frame = -2

Query: 312 QGTLQANFIGIYRVNRFLGNTEFAIW-TPNSCNIHFLPFDRYFSCFEDFLNGDRDLGPNT 136
           + TL+ NF G    +       + ++ TP   NI+    + YF  F +F    +      
Sbjct: 89  EATLKTNFNGTICRHASTDGFHYIVYPTPGQYNINNAAVEEYFEKFAEFAALGKSANIAD 148

Query: 135 MSRDERNL 112
           + +D RN+
Sbjct: 149 LPKDPRNV 156


>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical
           protein F15G9.4b protein.
          Length = 5198

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -1

Query: 319 ESSGDPSSQFYWHLQSQSLFGEYR 248
           E+ GDP  + +W+ + + L  +Y+
Sbjct: 633 EAMGDPKPEVHWYFKGRHLLNDYK 656


>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical
           protein F15G9.4a protein.
          Length = 5175

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -1

Query: 319 ESSGDPSSQFYWHLQSQSLFGEYR 248
           E+ GDP  + +W+ + + L  +Y+
Sbjct: 633 EAMGDPKPEVHWYFKGRHLLNDYK 656


>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical
           protein F15G9.4b protein.
          Length = 5198

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -1

Query: 319 ESSGDPSSQFYWHLQSQSLFGEYR 248
           E+ GDP  + +W+ + + L  +Y+
Sbjct: 633 EAMGDPKPEVHWYFKGRHLLNDYK 656


>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical
           protein F15G9.4a protein.
          Length = 5175

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -1

Query: 319 ESSGDPSSQFYWHLQSQSLFGEYR 248
           E+ GDP  + +W+ + + L  +Y+
Sbjct: 633 EAMGDPKPEVHWYFKGRHLLNDYK 656


>U64849-5|AAC48055.1|  174|Caenorhabditis elegans Saposin-like
           protein family protein19 protein.
          Length = 174

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -2

Query: 207 LPFDRYFSCFEDFLNGDRDLGPNTMSR 127
           LP +   +C  DF NG  +  PNT SR
Sbjct: 34  LPGEIKCTCSRDFCNGSFENDPNTSSR 60


>U39851-7|AAM81115.1|  668|Caenorhabditis elegans Proteasome
           regulatory particle,non-atpase-like protein 2, isoform a
           protein.
          Length = 668

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +1

Query: 1   YRSSSQFAKILEMAARIIRKIVPATRAGAAQYSTGVRKV 117
           Y    Q+ + LE A R    +VPATR G    +  V K+
Sbjct: 85  YFCLEQYERALEFALRGDFNVVPATRTGLGNDAEYVNKI 123


>U39851-6|AAM81116.1|  965|Caenorhabditis elegans Proteasome
           regulatory particle,non-atpase-like protein 2, isoform b
           protein.
          Length = 965

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +1

Query: 1   YRSSSQFAKILEMAARIIRKIVPATRAGAAQYSTGVRKV 117
           Y    Q+ + LE A R    +VPATR G    +  V K+
Sbjct: 85  YFCLEQYERALEFALRGDFNVVPATRTGLGNDAEYVNKI 123


>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
           precursor protein.
          Length = 5198

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -1

Query: 319 ESSGDPSSQFYWHLQSQSLFGEYR 248
           E+ GDP  + +W+ + + L  +Y+
Sbjct: 633 EAMGDPKPEVHWYFKGRHLLNDYK 656


>AF045643-2|AAC02596.2|  663|Caenorhabditis elegans Hypothetical
           protein F58H7.7 protein.
          Length = 663

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -2

Query: 117 NLAHASAVLSSAGSGRWHNFPDYSCSHFKNFRKLRRRAV 1
           NL     V+ S G   + N   +  +  +NF KLRR+ V
Sbjct: 617 NLRDEDPVVESTGVLIFKNISSFDNNELENFNKLRRKRV 655


>AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical
           protein F52G3.1 protein.
          Length = 1172

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = -2

Query: 231 PNSCNIHFLPFDRYFSCFEDFLN-GDRDL 148
           PN+ N+   PF  ++S F+   N GD  L
Sbjct: 844 PNNNNVSLAPFSNHYSSFQPLFNTGDAPL 872


>X59156-8|CAB56746.1|  103|Caenorhabditis elegans transposase
           protein.
          Length = 103

 Score = 25.8 bits (54), Expect = 7.7
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -2

Query: 234 TPNSCNIHFLPFDRYFSCFED 172
           T N+C IHF  F+  F C  D
Sbjct: 10  TGNNCCIHFQIFEHSFCCITD 30


>U58760-9|AAK31465.1|  654|Caenorhabditis elegans Dishevelled
           related protein 2 protein.
          Length = 654

 Score = 25.8 bits (54), Expect = 7.7
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 205 EEVDVTAVRGPDGKFGIPQKAIDSVNAN 288
           E  D T +RGPDG +  PQ    S + +
Sbjct: 563 ECADYTQLRGPDGGYKYPQSHASSASGH 590


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.317    0.136    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,757,812
Number of Sequences: 27780
Number of extensions: 150788
Number of successful extensions: 608
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 608
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 418861482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)