Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32597
         (300 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y00978-1|CAA68787.1|  615|Homo sapiens PDC-E2 precursor (AA -54 ...    38   0.004
J03866-1|AAA62253.1|  613|Homo sapiens dihydrolipoamide acetyltr...    38   0.004
BC039084-1|AAH39084.1|  647|Homo sapiens dihydrolipoamide S-acet...    38   0.004
AK223596-1|BAD97316.1|  647|Homo sapiens dihydrolipoamide S-acet...    38   0.004
Z48500-1|CAA88400.1|  273|Homo sapiens human mammary dihydrolipo...    36   0.031
AF317200-1|AAG31658.1|  103|Homo sapiens pyruvate dehydrogenase ...    33   0.22 
AF399629-1|AAK95114.1|  215|Homo sapiens olfactory receptor prot...    30   1.2  
AB065676-1|BAC05901.1|  311|Homo sapiens seven transmembrane hel...    30   1.2  
Y13145-1|CAA73606.1|  501|Homo sapiens protein X protein.              28   4.7  
U82328-1|AAC39661.1|  501|Homo sapiens pyruvate dehydrogenase co...    28   4.7  
BC010389-1|AAH10389.1|  501|Homo sapiens pyruvate dehydrogenase ...    28   4.7  
AJ298105-1|CAC18649.1|  501|Homo sapiens lipoyl-containing compo...    28   4.7  
AF001437-1|AAB66315.1|  501|Homo sapiens dihydrolipoamide dehydr...    28   4.7  

>Y00978-1|CAA68787.1|  615|Homo sapiens PDC-E2 precursor (AA -54 to
           561) protein.
          Length = 615

 Score = 38.3 bits (85), Expect = 0.004
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = +3

Query: 219 RYYSSLPSHIKVNLPALSPTMESGSI 296
           RYYS LP H KV LP+LSPTM++G+I
Sbjct: 52  RYYS-LPPHQKVPLPSLSPTMQAGTI 76



 Score = 33.1 bits (72), Expect = 0.16
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = +3

Query: 228 SSLPSHIKVNLPALSPTMESGSI 296
           SS P H++V LPALSPTM  G++
Sbjct: 181 SSYPPHMQVLLPALSPTMTMGTV 203


>J03866-1|AAA62253.1|  613|Homo sapiens dihydrolipoamide
           acetyltransferase protein.
          Length = 613

 Score = 38.3 bits (85), Expect = 0.004
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = +3

Query: 219 RYYSSLPSHIKVNLPALSPTMESGSI 296
           RYYS LP H KV LP+LSPTM++G+I
Sbjct: 51  RYYS-LPPHQKVPLPSLSPTMQAGTI 75



 Score = 33.1 bits (72), Expect = 0.16
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = +3

Query: 228 SSLPSHIKVNLPALSPTMESGSI 296
           SS P H++V LPALSPTM  G++
Sbjct: 180 SSYPPHMQVLLPALSPTMTMGTV 202


>BC039084-1|AAH39084.1|  647|Homo sapiens dihydrolipoamide
           S-acetyltransferase (E2 component of pyruvate
           dehydrogenase co protein.
          Length = 647

 Score = 38.3 bits (85), Expect = 0.004
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = +3

Query: 219 RYYSSLPSHIKVNLPALSPTMESGSI 296
           RYYS LP H KV LP+LSPTM++G+I
Sbjct: 84  RYYS-LPPHQKVPLPSLSPTMQAGTI 108



 Score = 33.1 bits (72), Expect = 0.16
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = +3

Query: 228 SSLPSHIKVNLPALSPTMESGSI 296
           SS P H++V LPALSPTM  G++
Sbjct: 213 SSYPPHMQVLLPALSPTMTMGTV 235


>AK223596-1|BAD97316.1|  647|Homo sapiens dihydrolipoamide
           S-acetyltransferase (E2 component of pyruvate
           dehydrogenase co protein.
          Length = 647

 Score = 38.3 bits (85), Expect = 0.004
 Identities = 18/26 (69%), Positives = 22/26 (84%)
 Frame = +3

Query: 219 RYYSSLPSHIKVNLPALSPTMESGSI 296
           RYYS LP H KV LP+LSPTM++G+I
Sbjct: 84  RYYS-LPPHQKVPLPSLSPTMQAGTI 108



 Score = 33.1 bits (72), Expect = 0.16
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = +3

Query: 228 SSLPSHIKVNLPALSPTMESGSI 296
           SS P H++V LPALSPTM  G++
Sbjct: 213 SSYPPHMQVLLPALSPTMTMGTV 235


>Z48500-1|CAA88400.1|  273|Homo sapiens human mammary
           dihydrolipoamide acetyltransferase,r protein.
          Length = 273

 Score = 35.5 bits (78), Expect = 0.031
 Identities = 17/26 (65%), Positives = 21/26 (80%)
 Frame = +3

Query: 219 RYYSSLPSHIKVNLPALSPTMESGSI 296
           RYYS LP H K  LP+LSPTM++G+I
Sbjct: 29  RYYS-LPPHQKGPLPSLSPTMQAGTI 53



 Score = 33.1 bits (72), Expect = 0.16
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = +3

Query: 228 SSLPSHIKVNLPALSPTMESGSI 296
           SS P H++V LPALSPTM  G++
Sbjct: 158 SSYPPHMQVLLPALSPTMTMGTV 180


>AF317200-1|AAG31658.1|  103|Homo sapiens pyruvate dehydrogenase
           complex component E2 precursor protein.
          Length = 103

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = +3

Query: 219 RYYSSLPSHIKVNLPALSPTM 281
           RYYS LP H KV LP+LSPTM
Sbjct: 84  RYYS-LPPHQKVPLPSLSPTM 103


>AF399629-1|AAK95114.1|  215|Homo sapiens olfactory receptor
           protein.
          Length = 215

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = -3

Query: 202 CGVDRTVWFCACSNNLFVTFLFASS--VLMHLVMFDRIA 92
           CGVDRT+    C   LF+     S+  VL+ ++ FDR A
Sbjct: 19  CGVDRTITRGGCVAQLFIYLALGSTECVLLVVMAFDRYA 57


>AB065676-1|BAC05901.1|  311|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 311

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
 Frame = -3

Query: 202 CGVDRTVWFCACSNNLFVTFLFASS--VLMHLVMFDRIA 92
           CGVDRT+    C   LF+     S+  VL+ ++ FDR A
Sbjct: 86  CGVDRTITRGGCVAQLFIYLALGSTECVLLVVMAFDRYA 124


>Y13145-1|CAA73606.1|  501|Homo sapiens protein X protein.
          Length = 501

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +3

Query: 246 IKVNLPALSPTMESGSI 296
           IK+ +P+LSPTME G+I
Sbjct: 57  IKILMPSLSPTMEEGNI 73


>U82328-1|AAC39661.1|  501|Homo sapiens pyruvate dehydrogenase
           complex protein X subunit precursor protein.
          Length = 501

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +3

Query: 246 IKVNLPALSPTMESGSI 296
           IK+ +P+LSPTME G+I
Sbjct: 57  IKILMPSLSPTMEEGNI 73


>BC010389-1|AAH10389.1|  501|Homo sapiens pyruvate dehydrogenase
           complex, component X protein.
          Length = 501

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +3

Query: 246 IKVNLPALSPTMESGSI 296
           IK+ +P+LSPTME G+I
Sbjct: 57  IKILMPSLSPTMEEGNI 73


>AJ298105-1|CAC18649.1|  501|Homo sapiens lipoyl-containing
           component X protein.
          Length = 501

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +3

Query: 246 IKVNLPALSPTMESGSI 296
           IK+ +P+LSPTME G+I
Sbjct: 57  IKILMPSLSPTMEEGNI 73


>AF001437-1|AAB66315.1|  501|Homo sapiens dihydrolipoamide
           dehydrogenase-binding protein protein.
          Length = 501

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +3

Query: 246 IKVNLPALSPTMESGSI 296
           IK+ +P+LSPTME G+I
Sbjct: 57  IKILMPSLSPTMEEGNI 73


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,771,084
Number of Sequences: 237096
Number of extensions: 715120
Number of successful extensions: 1551
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1551
length of database: 76,859,062
effective HSP length: 76
effective length of database: 58,839,766
effective search space used: 1353314618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)