Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32597
         (300 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023873-1|AAZ86794.1|  512|Drosophila melanogaster AT21758p pro...    49   1e-06
AE014134-1274|AAF52514.1|  512|Drosophila melanogaster CG5261-PB...    49   1e-06
L35770-1|AAA64525.1|  412|Drosophila melanogaster fringe protein...    29   1.4  
AY070927-1|AAL48549.1|  412|Drosophila melanogaster RE03010p pro...    29   1.4  
AE014296-3445|AAF51658.2|  412|Drosophila melanogaster CG10580-P...    29   1.4  

>BT023873-1|AAZ86794.1|  512|Drosophila melanogaster AT21758p
           protein.
          Length = 512

 Score = 49.2 bits (112), Expect = 1e-06
 Identities = 29/86 (33%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
 Frame = +3

Query: 42  LRTIVLRNQILSDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQM- 218
           LR+++LR+   +  ++++  + + R +S++L   +    +   ++  T  S   W+    
Sbjct: 15  LRSVLLRSNNATY-VRRSTGNVVVRALSSQLINSRKLQSI--RSKLNTSQSPVTWSYNFA 71

Query: 219 RYYSSLPSHIKVNLPALSPTMESGSI 296
           R Y++LP HI+V LPALSPTME GSI
Sbjct: 72  RAYANLPEHIRVPLPALSPTMERGSI 97


>AE014134-1274|AAF52514.1|  512|Drosophila melanogaster CG5261-PB,
           isoform B protein.
          Length = 512

 Score = 49.2 bits (112), Expect = 1e-06
 Identities = 29/86 (33%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
 Frame = +3

Query: 42  LRTIVLRNQILSDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQM- 218
           LR+++LR+   +  ++++  + + R +S++L   +    +   ++  T  S   W+    
Sbjct: 15  LRSVLLRSNNATY-VRRSTGNVVVRALSSQLINSRKLQSI--RSKLNTSQSPVTWSYNFA 71

Query: 219 RYYSSLPSHIKVNLPALSPTMESGSI 296
           R Y++LP HI+V LPALSPTME GSI
Sbjct: 72  RAYANLPEHIRVPLPALSPTMERGSI 97


>L35770-1|AAA64525.1|  412|Drosophila melanogaster fringe protein
           protein.
          Length = 412

 Score = 28.7 bits (61), Expect = 1.4
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +3

Query: 48  TIVLRNQILSDGLKKA-IRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQ 203
           T+++R  I S       +    T  + TELA+R    +LL     + V +TPQ
Sbjct: 89  TVIIRKDIRSFNFSDIEVSERPTATLLTELARRSRNGELLRDLSQRAVTATPQ 141


>AY070927-1|AAL48549.1|  412|Drosophila melanogaster RE03010p
           protein.
          Length = 412

 Score = 28.7 bits (61), Expect = 1.4
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +3

Query: 48  TIVLRNQILSDGLKKA-IRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQ 203
           T+++R  I S       +    T  + TELA+R    +LL     + V +TPQ
Sbjct: 89  TVIIRKDIRSFNFSDIEVSERPTATLLTELARRSRNGELLRDLSQRAVTATPQ 141


>AE014296-3445|AAF51658.2|  412|Drosophila melanogaster CG10580-PA
           protein.
          Length = 412

 Score = 28.7 bits (61), Expect = 1.4
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +3

Query: 48  TIVLRNQILSDGLKKA-IRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQ 203
           T+++R  I S       +    T  + TELA+R    +LL     + V +TPQ
Sbjct: 89  TVIIRKDIRSFNFSDIEVSERPTATLLTELARRSRNGELLRDLSQRAVTATPQ 141


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,031,038
Number of Sequences: 53049
Number of extensions: 239187
Number of successful extensions: 526
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 526
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 549010566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)