Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32597
(300 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical pr... 38 0.001
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 29 0.47
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 29 0.47
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 29 0.47
AC024201-2|AAK82924.1| 556|Caenorhabditis elegans Abnormal cell... 27 1.9
Z99286-1|CAH60792.1| 311|Caenorhabditis elegans Hypothetical pr... 27 3.3
X59156-7|CAB56745.1| 104|Caenorhabditis elegans transposase pro... 27 3.3
Z78420-5|CAI79244.1| 295|Caenorhabditis elegans Hypothetical pr... 26 4.4
Z78420-4|CAB01709.1| 298|Caenorhabditis elegans Hypothetical pr... 26 4.4
Z70683-2|CAA94592.2| 717|Caenorhabditis elegans Hypothetical pr... 26 4.4
U50135-4|AAA93455.3| 1487|Caenorhabditis elegans Hypothetical pr... 26 4.4
AF067214-6|AAC17005.2| 457|Caenorhabditis elegans Hypothetical ... 26 4.4
AF016676-8|AAG24105.1| 502|Caenorhabditis elegans Hypothetical ... 26 4.4
AC006608-3|AAF39757.1| 404|Caenorhabditis elegans Pyrophosphory... 26 4.4
U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr... 26 5.8
U88180-4|ABI18143.1| 114|Caenorhabditis elegans Hypothetical pr... 25 7.6
U41015-5|AAA82310.1| 166|Caenorhabditis elegans Hypothetical pr... 25 7.6
>Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical
protein F23B12.5 protein.
Length = 507
Score = 38.3 bits (85), Expect = 0.001
Identities = 19/30 (63%), Positives = 23/30 (76%), Gaps = 2/30 (6%)
Frame = +3
Query: 213 QMRYYSS--LPSHIKVNLPALSPTMESGSI 296
Q+R YSS LP H +V LPALSPTME G++
Sbjct: 65 QVRLYSSGNLPKHNRVALPALSPTMELGTV 94
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 29.5 bits (63), Expect = 0.47
Identities = 19/74 (25%), Positives = 33/74 (44%)
Frame = +3
Query: 75 SDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQMRYYSSLPSHIKV 254
SDG +R ++ E+ + + N+LL HA+++ TPQ TV Y
Sbjct: 23 SDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEE--KTPQRTVFREYNQEFLLPRGT 80
Query: 255 NLPALSPTMESGSI 296
N +S T+ + +
Sbjct: 81 NPEQISSTLSTDGV 94
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 29.5 bits (63), Expect = 0.47
Identities = 19/74 (25%), Positives = 33/74 (44%)
Frame = +3
Query: 75 SDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQMRYYSSLPSHIKV 254
SDG +R ++ E+ + + N+LL HA+++ TPQ TV Y
Sbjct: 120 SDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEE--KTPQRTVFREYNQEFLLPRGT 177
Query: 255 NLPALSPTMESGSI 296
N +S T+ + +
Sbjct: 178 NPEQISSTLSTDGV 191
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 29.5 bits (63), Expect = 0.47
Identities = 19/74 (25%), Positives = 33/74 (44%)
Frame = +3
Query: 75 SDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQMRYYSSLPSHIKV 254
SDG +R ++ E+ + + N+LL HA+++ TPQ TV Y
Sbjct: 134 SDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEE--KTPQRTVFREYNQEFLLPRGT 191
Query: 255 NLPALSPTMESGSI 296
N +S T+ + +
Sbjct: 192 NPEQISSTLSTDGV 205
>AC024201-2|AAK82924.1| 556|Caenorhabditis elegans Abnormal cell
lineage protein 17,isoform b protein.
Length = 556
Score = 27.5 bits (58), Expect = 1.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 152 RNFPFCQFCTNAPRNVRPYSFLKT 81
+NF FC C++AP V+P + T
Sbjct: 503 KNFIFCGMCSSAPVKVKPNRAINT 526
>Z99286-1|CAH60792.1| 311|Caenorhabditis elegans Hypothetical
protein Y7A9C.7 protein.
Length = 311
Score = 26.6 bits (56), Expect = 3.3
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = -3
Query: 193 DRTVWFCACSNNLFVTFLFASSVLMHLVMFDRIAFLRPSLKI*FRNTIVRNIINIFY 23
D T WF N+ F +F SS+LM +V+F A++ + + T++ +N FY
Sbjct: 15 DLTDWF---QNSYFA--VFTSSILMSVVLFPLYAYVFKMNRKHDQETLLFPAVNHFY 66
>X59156-7|CAB56745.1| 104|Caenorhabditis elegans transposase
protein.
Length = 104
Score = 26.6 bits (56), Expect = 3.3
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 30 ILIMLRTIVLRNQILSDGLKKAIRSNITRCISTELAKRKVTNKLLEHA 173
IL++ + +++D L K IR +T C S+ + T++LLE A
Sbjct: 50 ILVLESHFFHKKNVINDFLGKFIRLFLTSCSSSSCTEVVPTHELLEPA 97
>Z78420-5|CAI79244.1| 295|Caenorhabditis elegans Hypothetical
protein F45H11.1b protein.
Length = 295
Score = 26.2 bits (55), Expect = 4.4
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = +3
Query: 54 VLRNQILSDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQMRYYSS 233
V +N + S L + S+++ S A + L +Q +T+ + Q T M SS
Sbjct: 131 VYQNYLASSQLGGLLSSSVSAVASQLPAGINAQSALNITSQQRTIAKSFQHTKPMASSSS 190
Query: 234 LPSHIKVNLPALSPTMESGS 293
+PS + + + + + SGS
Sbjct: 191 IPSVLTASNSSANSLVSSGS 210
>Z78420-4|CAB01709.1| 298|Caenorhabditis elegans Hypothetical
protein F45H11.1a protein.
Length = 298
Score = 26.2 bits (55), Expect = 4.4
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = +3
Query: 54 VLRNQILSDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTVLSTPQWTVQMRYYSS 233
V +N + S L + S+++ S A + L +Q +T+ + Q T M SS
Sbjct: 131 VYQNYLASSQLGGLLSSSVSAVASQLPAGINAQSALNITSQQRTIAKSFQHTKPMASSSS 190
Query: 234 LPSHIKVNLPALSPTMESGS 293
+PS + + + + + SGS
Sbjct: 191 IPSVLTASNSSANSLVSSGS 210
>Z70683-2|CAA94592.2| 717|Caenorhabditis elegans Hypothetical
protein F13B12.3 protein.
Length = 717
Score = 26.2 bits (55), Expect = 4.4
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 111 TRCISTELAKRKVTNKLLEHAQNQTVLST 197
+RC S +++ R++ NKL E Q + + T
Sbjct: 32 SRCTSVDMSSREIINKLNEMEQEEKLFIT 60
>U50135-4|AAA93455.3| 1487|Caenorhabditis elegans Hypothetical
protein C52E12.4 protein.
Length = 1487
Score = 26.2 bits (55), Expect = 4.4
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 32 IDNVANNCVTESNLKRWS*ESYTVEHYEVH*YRTGKKESYE 154
+D NN + E L R+ Y+ EH+ + +ESYE
Sbjct: 532 VDAKVNNAIRECVLNRFVEMFYSYEHFVIGGQGCDDRESYE 572
>AF067214-6|AAC17005.2| 457|Caenorhabditis elegans Hypothetical
protein F56C3.2 protein.
Length = 457
Score = 26.2 bits (55), Expect = 4.4
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +3
Query: 27 KILIMLRTIVLRNQILSDGLKKAIRSNITRCISTELAKRKVTNKLLEHAQNQTV 188
K+L +TI+ +I DGL++ + + C+ ++ V K + +NQT+
Sbjct: 280 KVLKSRKTILCVKEISIDGLEECQMAEMLSCVKPRTLEKIVLQK--NYDENQTI 331
>AF016676-8|AAG24105.1| 502|Caenorhabditis elegans Hypothetical
protein F41B5.9 protein.
Length = 502
Score = 26.2 bits (55), Expect = 4.4
Identities = 8/27 (29%), Positives = 19/27 (70%)
Frame = +3
Query: 180 QTVLSTPQWTVQMRYYSSLPSHIKVNL 260
Q +LST +W + ++SLP+++++ +
Sbjct: 222 QEMLSTAEWLTNFQEFNSLPTNVQLEV 248
>AC006608-3|AAF39757.1| 404|Caenorhabditis elegans
Pyrophosphorylase family protein 1 protein.
Length = 404
Score = 26.2 bits (55), Expect = 4.4
Identities = 13/46 (28%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Frame = +3
Query: 57 LRNQILSDGLKKAIRSNITRCISTE----LAKRKVTNKLLEHAQNQ 182
+ N I+ DG++ +++T CI + AK KV N+++E +++
Sbjct: 354 ISNSIICDGVEIGENADVTNCIVAKDQKVPAKGKVQNEVVEDGEDE 399
>U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical
protein F54D11.2 protein.
Length = 1145
Score = 25.8 bits (54), Expect = 5.8
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 23 VKNIDNVANNCVTESNLKRWS*ESYTVEHYEVH 121
+KN+ +ANNC TE + W+ + +E+ EVH
Sbjct: 655 LKNLYTIANNC-TEDAI-TWT-HQFMIENLEVH 684
>U88180-4|ABI18143.1| 114|Caenorhabditis elegans Hypothetical
protein T27A3.8 protein.
Length = 114
Score = 25.4 bits (53), Expect = 7.6
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = -3
Query: 157 LFVTFLFASSVLMHLVMFDRIAFLRPSLKI*FRNTI 50
+ ++ + ++ VL+H+ + + P LKI FRN++
Sbjct: 68 IIISIVISTKVLLHIFSYGTLFQNIPILKIIFRNSL 103
>U41015-5|AAA82310.1| 166|Caenorhabditis elegans Hypothetical
protein F20B6.1 protein.
Length = 166
Score = 25.4 bits (53), Expect = 7.6
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 169 CSNNLFVTFLFASSVLMHLVMFDRIAFL 86
C L V +FAS V +HL D + F+
Sbjct: 7 CGCGLLVVVIFASRVQLHLNSRDNVGFV 34
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,878,381
Number of Sequences: 27780
Number of extensions: 131184
Number of successful extensions: 334
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 334
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 313072342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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