Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32555
         (374 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28737-8|ABA61869.1|  537|Caenorhabditis elegans Hypothetical pr...    28   1.9  
U28737-7|ABA61870.1|  501|Caenorhabditis elegans Hypothetical pr...    28   1.9  
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr...    27   4.4  
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr...    27   4.4  
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.      27   4.4  
AF022974-7|AAC48042.2|  293|Caenorhabditis elegans Serpentine re...    26   7.6  

>U28737-8|ABA61869.1|  537|Caenorhabditis elegans Hypothetical
           protein F14B8.5a protein.
          Length = 537

 Score = 28.3 bits (60), Expect = 1.9
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -3

Query: 156 HCNFGVSNGIL*CAYSFMRVLPCACSTQQY 67
           +CNF  SN    C +SF+ V+ CA  + QY
Sbjct: 172 NCNFVPSNHQNQCQFSFVLVISCADQSIQY 201


>U28737-7|ABA61870.1|  501|Caenorhabditis elegans Hypothetical
           protein F14B8.5b protein.
          Length = 501

 Score = 28.3 bits (60), Expect = 1.9
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -3

Query: 156 HCNFGVSNGIL*CAYSFMRVLPCACSTQQY 67
           +CNF  SN    C +SF+ V+ CA  + QY
Sbjct: 136 NCNFVPSNHQNQCQFSFVLVISCADQSIQY 165


>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 105 MRVLPCACSTQQY*IYNVSSQIQYRR 28
           ++V+PC  +  Q     VS+Q+QYRR
Sbjct: 3   LKVIPCTLTKNQEVFKCVSAQLQYRR 28


>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
           protein ZK520.3a protein.
          Length = 1383

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 105 MRVLPCACSTQQY*IYNVSSQIQYRR 28
           ++V+PC  +  Q     VS+Q+QYRR
Sbjct: 3   LKVIPCTLTKNQEVFKCVSAQLQYRR 28


>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
          Length = 1383

 Score = 27.1 bits (57), Expect = 4.4
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 105 MRVLPCACSTQQY*IYNVSSQIQYRR 28
           ++V+PC  +  Q     VS+Q+QYRR
Sbjct: 3   LKVIPCTLTKNQEVFKCVSAQLQYRR 28


>AF022974-7|AAC48042.2|  293|Caenorhabditis elegans Serpentine
           receptor, class sx protein9 protein.
          Length = 293

 Score = 26.2 bits (55), Expect = 7.6
 Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
 Frame = +1

Query: 7   TLSRAFVATILNLTADIIYLILLRTARARQHTH-----KTIRALQNTIT 138
           T+ + F+  I N+   ++Y+IL+RT   ++ T      KTI+ LQ +++
Sbjct: 164 TVYKLFIIFI-NIIVTVVYVILIRTFHLKKQTGNLTSLKTIKGLQFSVS 211


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,817,408
Number of Sequences: 27780
Number of extensions: 73686
Number of successful extensions: 190
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 546325158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)