Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32539
         (323 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY684169-1|AAT74627.1| 3052|Homo sapiens REV3-like, catalytic su...    29   2.4  
AL512325-1|CAI20998.1| 3130|Homo sapiens REV3-like, catalytic su...    29   2.4  
AL136310-2|CAI20509.1| 3130|Homo sapiens REV3-like, catalytic su...    29   2.4  
AL080317-2|CAI19192.1| 3130|Homo sapiens REV3-like, catalytic su...    29   2.4  
AF179429-1|AAG09403.1| 3052|Homo sapiens DNA polymerase zeta cat...    29   2.4  
AF179428-1|AAG09402.1| 3052|Homo sapiens DNA polymerase zeta cat...    29   2.4  
AF157476-1|AAD40184.1| 3130|Homo sapiens DNA polymerase zeta cat...    29   2.4  
AF078695-1|AAC28460.1| 3052|Homo sapiens DNA polymerase zeta cat...    29   2.4  
AF071798-1|AAC24009.1| 3130|Homo sapiens DNA polymerase zeta cat...    29   2.4  
AF058701-1|AAC24357.1| 3130|Homo sapiens DNA polymerase zeta cat...    29   2.4  
AF035537-1|AAB88486.1| 3052|Homo sapiens DNA polymerase zeta pro...    29   2.4  
AK093255-1|BAC04111.1|  623|Homo sapiens protein ( Homo sapiens ...    29   3.2  

>AY684169-1|AAT74627.1| 3052|Homo sapiens REV3-like, catalytic
           subunit of DNA polymerase zeta (yeast) protein.
          Length = 3052

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 17/57 (29%), Positives = 30/57 (52%)
 Frame = +2

Query: 38  PACAFTHNIKMLAKMAPSQDKLVHLHKTPTSLDINPSGLLFAFVELNHYNNECESQG 208
           P+  +T NI+ + K +P     +H+H+ P    +  +   F F +LNH  N+  S+G
Sbjct: 596 PSRKYT-NIRKIEKDSP----FIHMHRHPNENTLGKNS--FNFSDLNHSKNKVSSEG 645


>AL512325-1|CAI20998.1| 3130|Homo sapiens REV3-like, catalytic
           subunit of DNA polymerase zeta (yeast) protein.
          Length = 3130

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 17/57 (29%), Positives = 30/57 (52%)
 Frame = +2

Query: 38  PACAFTHNIKMLAKMAPSQDKLVHLHKTPTSLDINPSGLLFAFVELNHYNNECESQG 208
           P+  +T NI+ + K +P     +H+H+ P    +  +   F F +LNH  N+  S+G
Sbjct: 674 PSRKYT-NIRKIEKDSP----FIHMHRHPNENTLGKNS--FNFSDLNHSKNKVSSEG 723


>AL136310-2|CAI20509.1| 3130|Homo sapiens REV3-like, catalytic
           subunit of DNA polymerase zeta (yeast) protein.
          Length = 3130

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 17/57 (29%), Positives = 30/57 (52%)
 Frame = +2

Query: 38  PACAFTHNIKMLAKMAPSQDKLVHLHKTPTSLDINPSGLLFAFVELNHYNNECESQG 208
           P+  +T NI+ + K +P     +H+H+ P    +  +   F F +LNH  N+  S+G
Sbjct: 674 PSRKYT-NIRKIEKDSP----FIHMHRHPNENTLGKNS--FNFSDLNHSKNKVSSEG 723


>AL080317-2|CAI19192.1| 3130|Homo sapiens REV3-like, catalytic
           subunit of DNA polymerase zeta (yeast) protein.
          Length = 3130

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 17/57 (29%), Positives = 30/57 (52%)
 Frame = +2

Query: 38  PACAFTHNIKMLAKMAPSQDKLVHLHKTPTSLDINPSGLLFAFVELNHYNNECESQG 208
           P+  +T NI+ + K +P     +H+H+ P    +  +   F F +LNH  N+  S+G
Sbjct: 674 PSRKYT-NIRKIEKDSP----FIHMHRHPNENTLGKNS--FNFSDLNHSKNKVSSEG 723


>AF179429-1|AAG09403.1| 3052|Homo sapiens DNA polymerase zeta
           catalytic subunit variant 2 protein.
          Length = 3052

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 17/57 (29%), Positives = 30/57 (52%)
 Frame = +2

Query: 38  PACAFTHNIKMLAKMAPSQDKLVHLHKTPTSLDINPSGLLFAFVELNHYNNECESQG 208
           P+  +T NI+ + K +P     +H+H+ P    +  +   F F +LNH  N+  S+G
Sbjct: 596 PSRKYT-NIRKIEKDSP----FIHMHRHPNENTLGKNS--FNFSDLNHSKNKVSSEG 645


>AF179428-1|AAG09402.1| 3052|Homo sapiens DNA polymerase zeta
           catalytic subunit variant 1 protein.
          Length = 3052

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 17/57 (29%), Positives = 30/57 (52%)
 Frame = +2

Query: 38  PACAFTHNIKMLAKMAPSQDKLVHLHKTPTSLDINPSGLLFAFVELNHYNNECESQG 208
           P+  +T NI+ + K +P     +H+H+ P    +  +   F F +LNH  N+  S+G
Sbjct: 596 PSRKYT-NIRKIEKDSP----FIHMHRHPNENTLGKNS--FNFSDLNHSKNKVSSEG 645


>AF157476-1|AAD40184.1| 3130|Homo sapiens DNA polymerase zeta
           catalytic subunit protein.
          Length = 3130

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 17/57 (29%), Positives = 30/57 (52%)
 Frame = +2

Query: 38  PACAFTHNIKMLAKMAPSQDKLVHLHKTPTSLDINPSGLLFAFVELNHYNNECESQG 208
           P+  +T NI+ + K +P     +H+H+ P    +  +   F F +LNH  N+  S+G
Sbjct: 674 PSRKYT-NIRKIEKDSP----FIHMHRHPNENTLGKNS--FNFSDLNHSKNKVSSEG 723


>AF078695-1|AAC28460.1| 3052|Homo sapiens DNA polymerase zeta
           catalytic subunit protein.
          Length = 3052

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 17/57 (29%), Positives = 30/57 (52%)
 Frame = +2

Query: 38  PACAFTHNIKMLAKMAPSQDKLVHLHKTPTSLDINPSGLLFAFVELNHYNNECESQG 208
           P+  +T NI+ + K +P     +H+H+ P    +  +   F F +LNH  N+  S+G
Sbjct: 596 PSRKYT-NIRKIEKDSP----FIHMHRHPNENTLGKNS--FNFSDLNHSKNKVSSEG 645


>AF071798-1|AAC24009.1| 3130|Homo sapiens DNA polymerase zeta
           catalytic subunit protein.
          Length = 3130

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 17/57 (29%), Positives = 30/57 (52%)
 Frame = +2

Query: 38  PACAFTHNIKMLAKMAPSQDKLVHLHKTPTSLDINPSGLLFAFVELNHYNNECESQG 208
           P+  +T NI+ + K +P     +H+H+ P    +  +   F F +LNH  N+  S+G
Sbjct: 674 PSRKYT-NIRKIEKDSP----FIHMHRHPNENTLGKNS--FNFSDLNHSKNKVSSEG 723


>AF058701-1|AAC24357.1| 3130|Homo sapiens DNA polymerase zeta
           catalytic subunit protein.
          Length = 3130

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 17/57 (29%), Positives = 30/57 (52%)
 Frame = +2

Query: 38  PACAFTHNIKMLAKMAPSQDKLVHLHKTPTSLDINPSGLLFAFVELNHYNNECESQG 208
           P+  +T NI+ + K +P     +H+H+ P    +  +   F F +LNH  N+  S+G
Sbjct: 674 PSRKYT-NIRKIEKDSP----FIHMHRHPNENTLGKNS--FNFSDLNHSKNKVSSEG 723


>AF035537-1|AAB88486.1| 3052|Homo sapiens DNA polymerase zeta
           protein.
          Length = 3052

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 17/57 (29%), Positives = 30/57 (52%)
 Frame = +2

Query: 38  PACAFTHNIKMLAKMAPSQDKLVHLHKTPTSLDINPSGLLFAFVELNHYNNECESQG 208
           P+  +T NI+ + K +P     +H+H+ P    +  +   F F +LNH  N+  S+G
Sbjct: 596 PSRKYT-NIRKIEKDSP----FIHMHRHPNENTLGKNS--FNFSDLNHSKNKVSSEG 645


>AK093255-1|BAC04111.1|  623|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35936 fis, clone TESTI2011448, weakly similar to
           Human l(3)mbt protein homolog mRNA. ).
          Length = 623

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 19/56 (33%), Positives = 31/56 (55%)
 Frame = -1

Query: 317 ARKVFKQIXIIIQEILNFEQQTALIVSEQIDGRSP*LLVTRTHCCNDLVPRMRIKV 150
           AR    ++   +Q +L  E+       EQIDG++  LL+T+T    D+V  M+IK+
Sbjct: 541 ARWTVDEVAEFVQSLLGCEEHAKCFKKEQIDGKA-FLLLTQT----DIVKVMKIKL 591


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,942,834
Number of Sequences: 237096
Number of extensions: 893995
Number of successful extensions: 1411
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1410
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1627597384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)