Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32530
(331 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1509 - 34074206-34074398,34074506-34074777,34075411-340756... 29 0.89
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 28 1.5
03_05_0432 - 24231984-24233048,24233391-24235160,24235261-242365... 27 2.7
03_02_0834 - 11630288-11630500,11630531-11630623,11630844-116310... 27 2.7
02_03_0317 - 17659356-17659634,17660028-17660552,17660587-176606... 27 3.6
12_02_0768 - 22988119-22988223,22988337-22988558,22988645-229888... 26 6.2
09_02_0177 - 5390594-5390692,5391924-5391998,5392843-5392942,539... 26 6.2
05_02_0140 - 7046100-7046460,7047072-7047262 26 6.2
05_04_0220 - 19167485-19169290 26 8.3
05_03_0012 - 7355493-7355645,7356309-7356370,7356885-7356972,735... 26 8.3
01_06_0343 + 28566513-28566644,28566791-28568494,28569178-285692... 26 8.3
01_06_0030 + 25756294-25756575,25756977-25757101,25757276-257573... 26 8.3
>04_04_1509 -
34074206-34074398,34074506-34074777,34075411-34075608,
34076092-34076187,34076318-34076500,34076597-34076799,
34076887-34077013,34077098-34077292,34077400-34077540,
34077669-34077812,34077876-34078040,34078776-34078976,
34079049-34079195,34079275-34079427,34079731-34079833,
34079954-34080069,34080168-34080349,34080442-34080541,
34081200-34081527,34081605-34081834,34081979-34082110,
34082787-34082859,34083274-34083338
Length = 1248
Score = 29.1 bits (62), Expect = 0.89
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = -2
Query: 270 LQKEVDRLXDELVAEKEKYKDIGDDLD 190
+QKE++ L D L +E++ K++ +DLD
Sbjct: 625 MQKELEGLRDTLQSERQSIKEVTNDLD 651
>01_06_0124 -
26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = -2
Query: 321 LKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
+KE+ + + LQKE L EL + +K++G+DL+ F ++
Sbjct: 707 VKELESTNGDLNDKIAVLQKEGSSLASELQQLEASFKNLGNDLEQKFEQI 756
>03_05_0432 - 24231984-24233048,24233391-24235160,24235261-24236582,
24236668-24237013
Length = 1500
Score = 27.5 bits (58), Expect = 2.7
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVELILKE*ASVI 145
+L E+ + + L +E L DEL +EK + DD E++ K+ SV+
Sbjct: 830 QLSELQGSRRSLQSEIIKLIQENSMLSDELCDSREKERVFEDDFSILISEVMSKDILSVV 889
Query: 144 QR 139
R
Sbjct: 890 FR 891
>03_02_0834 -
11630288-11630500,11630531-11630623,11630844-11631050,
11631301-11633089,11633817-11634145
Length = 876
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/53 (26%), Positives = 29/53 (54%)
Frame = -2
Query: 318 KEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVELILKE 160
KE+ A + + L+K + L +++ + K+K K + +D+ E++LKE
Sbjct: 795 KELTALRCTLKTETKQLRKTISALQNDVASLKQKMKSLDEDILLKEGEILLKE 847
>02_03_0317 -
17659356-17659634,17660028-17660552,17660587-17660661,
17661699-17662496
Length = 558
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 5 FENKYHHVCMDFHNLKVRNTKY 70
FENK + D N+K RN KY
Sbjct: 336 FENKLENATKDASNMKFRNPKY 357
>12_02_0768 -
22988119-22988223,22988337-22988558,22988645-22988810,
22989176-22989181,22989281-22989453,22989737-22989928,
22990034-22990211,22990302-22990444,22990666-22990755,
22990869-22990991,22991391-22991568,22992213-22992442,
22992557-22992616,22992731-22992798,22992908-22992953
Length = 659
Score = 26.2 bits (55), Expect = 6.2
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +2
Query: 8 ENKYHHVCMDFHNLKVRNTKYKLESMFEY 94
E KY ++ D N K+R + +L+ +F Y
Sbjct: 31 EPKYLNILQDVANRKIRAVQIELDDLFHY 59
>09_02_0177 -
5390594-5390692,5391924-5391998,5392843-5392942,
5393143-5393244,5393335-5393444,5393896-5393968,
5394976-5395043,5395382-5395475,5396804-5397165
Length = 360
Score = 26.2 bits (55), Expect = 6.2
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = -2
Query: 327 TRLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
T L+E+ ER+V E RL + A EKY+++ +DL VEL
Sbjct: 236 TALQEIEQPTNAKERNVA----EPLRLDEAAQANIEKYRNLQEDLTDEIVEL 283
>05_02_0140 - 7046100-7046460,7047072-7047262
Length = 183
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGD 199
R ++ ARA+ AE + ++E D +ELV K + I D
Sbjct: 124 RRRDAEARADDAEARLLAAEEEKDARAEELVLAAAKRRQIRD 165
>05_04_0220 - 19167485-19169290
Length = 601
Score = 25.8 bits (54), Expect = 8.3
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +3
Query: 243 LXAYRPPFAVSARNARRTRHVLXPPSN 323
+ A+ PP ++A +AR+ H+ P N
Sbjct: 1 MSAHHPPHGIAAGDARKAHHLGGDPKN 27
>05_03_0012 -
7355493-7355645,7356309-7356370,7356885-7356972,
7357677-7357780,7357931-7358010,7359127-7359183,
7359924-7360036
Length = 218
Score = 25.8 bits (54), Expect = 8.3
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Frame = -2
Query: 318 KEVXARAEFAERSVQTLQK----EVDRLXDELVAEKEKYKDI 205
+E + AE AER VQ K E++R+ E AE YK++
Sbjct: 150 REAVSAAEKAERKVQLRDKKRREEMERVEKEKQAEIRSYKNL 191
>01_06_0343 +
28566513-28566644,28566791-28568494,28569178-28569240,
28569241-28569310,28570438-28570715,28571886-28571963,
28573017-28573715,28573811-28573913,28574096-28574196,
28574272-28574446,28574843-28575013,28575534-28575634,
28575706-28575771
Length = 1246
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 318 KEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDL 193
KE ARAE AER V+ ++ ++ E + K++ +L
Sbjct: 514 KEAAARAEAAEREVREMEARAAQVAAEAEKTAAEQKELEQEL 555
>01_06_0030 +
25756294-25756575,25756977-25757101,25757276-25757313,
25757501-25757611,25757703-25757782,25758264-25758318,
25758465-25758851,25759080-25759223,25759630-25759671,
25759755-25759837
Length = 448
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -3
Query: 308 KHVPSSPSVPCRHCKRRSIGXKTN 237
+H + P+ PCR C RR G N
Sbjct: 298 QHEDARPAPPCRLCHRRHSGEPRN 321
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,347,967
Number of Sequences: 37544
Number of extensions: 114546
Number of successful extensions: 332
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 332
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 447336660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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