Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32530
(331 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X04201-1|CAA27798.1| 285|Homo sapiens protein ( Human skeletal ... 60 2e-09
BC062740-1|AAH62740.1| 158|Homo sapiens TPM3 protein protein. 60 2e-09
BC008425-1|AAH08425.1| 285|Homo sapiens tropomyosin 3 protein. 60 2e-09
BC008407-1|AAH08407.1| 285|Homo sapiens tropomyosin 3 protein. 60 2e-09
AL590431-12|CAH71269.1| 284|Homo sapiens tropomyosin 3 protein. 60 2e-09
AL590431-11|CAH71270.1| 242|Homo sapiens tropomyosin 3 protein. 60 2e-09
AL590431-7|CAH71266.1| 248|Homo sapiens tropomyosin 3 protein. 60 2e-09
AL590431-4|CAH71262.1| 158|Homo sapiens tropomyosin 3 protein. 60 2e-09
AK092690-1|BAC03946.1| 243|Homo sapiens protein ( Homo sapiens ... 60 2e-09
AF474157-1|AAL84570.1| 247|Homo sapiens TPMsk3 protein. 60 2e-09
M19714-1|AAA61226.1| 264|Homo sapiens TPM1 protein. 58 5e-09
M19713-1|AAA61225.1| 284|Homo sapiens TPM1 protein. 58 5e-09
BC007433-1|AAH07433.1| 284|Homo sapiens tropomyosin 1 (alpha) p... 58 5e-09
AY640415-1|AAT68295.1| 284|Homo sapiens tropomyosin alpha stria... 58 5e-09
AY640414-1|AAT68294.1| 284|Homo sapiens sarcomeric tropomyosin ... 58 5e-09
AK129882-1|BAC85248.1| 217|Homo sapiens protein ( Homo sapiens ... 58 5e-09
X06825-1|CAA29971.1| 284|Homo sapiens protein ( Human mRNA for ... 57 1e-08
M12126-1|AAA61229.1| 131|Homo sapiens TPM2 protein. 57 1e-08
AL133410-4|CAI10977.1| 284|Homo sapiens tropomyosin 2 (beta) pr... 57 1e-08
AF474156-1|AAL84569.1| 203|Homo sapiens TPMsk1 protein. 52 4e-07
M75165-1|AAB59509.1| 284|Homo sapiens tropomyosin protein. 48 7e-06
M74817-1|AAA61230.1| 284|Homo sapiens tropomyosin-1 protein. 48 7e-06
M12125-1|AAA36773.1| 284|Homo sapiens protein ( Human fibroblas... 48 7e-06
BC011776-1|AAH11776.1| 284|Homo sapiens tropomyosin 2 (beta) pr... 48 7e-06
AL133410-2|CAI10974.1| 284|Homo sapiens tropomyosin 2 (beta) pr... 48 7e-06
AL133410-1|CAI10975.1| 284|Homo sapiens tropomyosin 2 (beta) pr... 48 7e-06
AK223258-1|BAD96978.1| 284|Homo sapiens tropomyosin 2 (beta) is... 48 7e-06
X04588-1|CAB37185.1| 248|Homo sapiens protein ( Human 2.5 kb mR... 46 4e-05
BC072428-1|AAH72428.1| 248|Homo sapiens tropomyosin 3 protein. 46 4e-05
BC015403-1|AAH15403.1| 248|Homo sapiens tropomyosin 3 protein. 46 4e-05
BC000771-1|AAH00771.1| 248|Homo sapiens tropomyosin 3 protein. 46 4e-05
AL590431-9|CAH71267.1| 248|Homo sapiens tropomyosin 3 protein. 46 4e-05
AL590431-8|CAH71264.1| 248|Homo sapiens tropomyosin 3 protein. 46 4e-05
AL590431-6|CAH71265.1| 232|Homo sapiens tropomyosin 3 protein. 46 4e-05
AL590431-5|CAH71263.1| 224|Homo sapiens tropomyosin 3 protein. 46 4e-05
AL590431-3|CAH71261.1| 158|Homo sapiens tropomyosin 3 protein. 46 4e-05
AL590431-2|CAH71260.1| 233|Homo sapiens tropomyosin 3 protein. 46 4e-05
AK092712-1|BAC03956.1| 183|Homo sapiens protein ( Homo sapiens ... 46 4e-05
AB062125-1|BAB93457.1| 92|Homo sapiens cytoskeletal tropomyosi... 46 4e-05
BC053545-1|AAH53545.1| 245|Homo sapiens tropomyosin 1 (alpha) p... 45 6e-05
BC050473-1|AAH50473.1| 287|Homo sapiens TPM1 protein protein. 45 6e-05
AB209041-1|BAD92278.1| 303|Homo sapiens TPM1 protein variant pr... 45 6e-05
X12369-1|CAA30930.1| 227|Homo sapiens tropomyosin (227 AA) prot... 44 1e-04
M19715-1|AAA61227.1| 229|Homo sapiens TPM1 protein. 44 1e-04
M19267-1|AAA36771.1| 284|Homo sapiens protein ( Human tropomyos... 44 1e-04
AK131384-1|BAD18535.1| 326|Homo sapiens protein ( Homo sapiens ... 44 1e-04
AY004867-1|AAF87083.1| 247|Homo sapiens tropomyosin isoform pro... 44 2e-04
AL590431-10|CAH71268.1| 247|Homo sapiens tropomyosin 3 protein. 44 2e-04
X05276-1|CAA28888.1| 248|Homo sapiens protein ( Human mRNA for ... 43 2e-04
M12127-1|AAA36774.1| 131|Homo sapiens protein ( Human cytoskele... 43 2e-04
BT019634-1|AAV38440.1| 248|Homo sapiens tropomyosin 4 protein. 43 2e-04
BC067225-1|AAH67225.1| 248|Homo sapiens tropomyosin 4 protein. 43 2e-04
BC037576-1|AAH37576.1| 248|Homo sapiens tropomyosin 4 protein. 43 2e-04
BC002827-1|AAH02827.1| 248|Homo sapiens tropomyosin 4 protein. 43 2e-04
AK023385-1|BAB14554.1| 284|Homo sapiens protein ( Homo sapiens ... 43 2e-04
DQ424903-1|ABD83668.1| 245|Homo sapiens tropomyosin 1 alpha var... 42 3e-04
Z24727-1|CAA80853.1| 243|Homo sapiens tropomyosin isoform protein. 40 0.001
BC061910-1|AAH61910.1| 92|Homo sapiens tropomyosin 3 pseudogen... 40 0.001
DQ120714-1|ABC40673.1| 247|Homo sapiens rcTPM3 protein. 40 0.002
X03541-1|CAA27243.1| 641|Homo sapiens protein ( Human mRNA of t... 38 0.006
AJ001055-1|CAA04505.1| 48|Homo sapiens alpha-tropomyosin protein. 38 0.007
AJ000147-1|CAA03930.1| 48|Homo sapiens alpha-tropomyosin protein. 38 0.007
M12128-1|AAA36775.1| 96|Homo sapiens protein ( Human cytoskele... 36 0.023
AL133410-3|CAI10976.1| 322|Homo sapiens tropomyosin 2 (beta) pr... 35 0.053
AF362886-1|AAK51963.1| 103|Homo sapiens tropomyosin 4-anaplasti... 35 0.053
AF209746-1|AAF17621.1| 257|Homo sapiens beta tropomyosin protein. 35 0.069
AF362887-1|AAK51964.1| 142|Homo sapiens tropomyosin 4-anaplasti... 33 0.16
AF310722-1|AAK17926.1| 320|Homo sapiens tropomyosin 4-anaplasti... 33 0.16
AF186110-1|AAG17015.1| 227|Homo sapiens TPM4-ALK fusion oncopro... 33 0.16
AF186109-1|AAG17014.1| 237|Homo sapiens TPM4-ALK fusion oncopro... 33 0.16
Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)... 31 1.1
U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain pro... 31 1.1
AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (meros... 31 1.1
AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (meros... 31 1.1
AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (meros... 31 1.1
AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (meros... 31 1.1
AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (meros... 31 1.1
AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (meros... 31 1.1
AB208922-1|BAD92159.1| 1853|Homo sapiens laminin alpha 2 subunit... 31 1.1
AL096857-1|CAB51071.1| 2701|Homo sapiens hypothetical protein pr... 29 2.6
AF488829-1|AAO49478.1| 2701|Homo sapiens HBxAg transactivated pr... 29 2.6
AB029019-1|BAA83048.2| 1919|Homo sapiens KIAA1096 protein protein. 29 2.6
AL627308-5|CAH71337.1| 1719|Homo sapiens CDC42 binding protein k... 29 4.6
AL627308-3|CAH71336.1| 1732|Homo sapiens CDC42 binding protein k... 29 4.6
AL451047-3|CAH71183.1| 1719|Homo sapiens CDC42 binding protein k... 29 4.6
AL451047-1|CAH71185.1| 1732|Homo sapiens CDC42 binding protein k... 29 4.6
AL353689-9|CAI19108.1| 1719|Homo sapiens CDC42 binding protein k... 29 4.6
AL353689-7|CAI19109.1| 1732|Homo sapiens CDC42 binding protein k... 29 4.6
AJ518975-1|CAD57745.1| 1719|Homo sapiens CDC42 binding protein k... 29 4.6
AB208968-1|BAD92205.1| 1702|Homo sapiens CDC42 binding protein k... 29 4.6
AL080251-3|CAI23419.1| 356|Homo sapiens novel protein protein. 28 8.0
>X04201-1|CAA27798.1| 285|Homo sapiens protein ( Human skeletal
muscle 1.3 kb mRNA for tropomyosin. ).
Length = 285
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/53 (54%), Positives = 37/53 (69%)
Frame = -2
Query: 330 TTRLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
T +LKE RAEFAERSV L+K +D L DEL A+K KYK I ++LD A ++
Sbjct: 230 TDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDM 282
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -2
Query: 303 RAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLD 190
RAE AE + ++ +L DEL A ++K K D+LD
Sbjct: 22 RAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELD 59
>BC062740-1|AAH62740.1| 158|Homo sapiens TPM3 protein protein.
Length = 158
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/53 (54%), Positives = 37/53 (69%)
Frame = -2
Query: 330 TTRLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
T +LKE RAEFAERSV L+K +D L DEL A+K KYK I ++LD A ++
Sbjct: 103 TDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDM 155
>BC008425-1|AAH08425.1| 285|Homo sapiens tropomyosin 3 protein.
Length = 285
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/53 (54%), Positives = 37/53 (69%)
Frame = -2
Query: 330 TTRLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
T +LKE RAEFAERSV L+K +D L DEL A+K KYK I ++LD A ++
Sbjct: 230 TDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDM 282
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -2
Query: 303 RAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLD 190
RAE AE + ++ +L DEL A ++K K D+LD
Sbjct: 22 RAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELD 59
>BC008407-1|AAH08407.1| 285|Homo sapiens tropomyosin 3 protein.
Length = 285
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/53 (54%), Positives = 37/53 (69%)
Frame = -2
Query: 330 TTRLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
T +LKE RAEFAERSV L+K +D L DEL A+K KYK I ++LD A ++
Sbjct: 230 TDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDM 282
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -2
Query: 303 RAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLD 190
RAE AE + ++ +L DEL A ++K K D+LD
Sbjct: 22 RAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELD 59
>AL590431-12|CAH71269.1| 284|Homo sapiens tropomyosin 3 protein.
Length = 284
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/53 (54%), Positives = 37/53 (69%)
Frame = -2
Query: 330 TTRLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
T +LKE RAEFAERSV L+K +D L DEL A+K KYK I ++LD A ++
Sbjct: 229 TDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDM 281
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -2
Query: 303 RAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLD 190
RAE AE + ++ +L DEL A ++K K D+LD
Sbjct: 21 RAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELD 58
>AL590431-11|CAH71270.1| 242|Homo sapiens tropomyosin 3 protein.
Length = 242
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/53 (54%), Positives = 37/53 (69%)
Frame = -2
Query: 330 TTRLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
T +LKE RAEFAERSV L+K +D L DEL A+K KYK I ++LD A ++
Sbjct: 187 TDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDM 239
Score = 31.5 bits (68), Expect = 0.65
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = -2
Query: 303 RAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVELILKE*ASVIQRLE 133
RAE AE + ++ +L DEL A ++K K D+LD A L A+ +Q+LE
Sbjct: 21 RAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDRAQERL-----ATALQKLE 72
>AL590431-7|CAH71266.1| 248|Homo sapiens tropomyosin 3 protein.
Length = 248
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/53 (54%), Positives = 37/53 (69%)
Frame = -2
Query: 330 TTRLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
T +LKE RAEFAERSV L+K +D L DEL A+K KYK I ++LD A ++
Sbjct: 193 TDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDM 245
>AL590431-4|CAH71262.1| 158|Homo sapiens tropomyosin 3 protein.
Length = 158
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/53 (54%), Positives = 37/53 (69%)
Frame = -2
Query: 330 TTRLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
T +LKE RAEFAERSV L+K +D L DEL A+K KYK I ++LD A ++
Sbjct: 103 TDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDM 155
>AK092690-1|BAC03946.1| 243|Homo sapiens protein ( Homo sapiens
cDNA FLJ35371 fis, clone SKMUS2001740, highly similar to
TROPOMYOSIN ALPHA CHAIN, SKELETAL MUSCLE TYPE. ).
Length = 243
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/53 (54%), Positives = 37/53 (69%)
Frame = -2
Query: 330 TTRLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
T +LKE RAEFAERSV L+K +D L DEL A+K KYK I ++LD A ++
Sbjct: 188 TDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDM 240
Score = 31.5 bits (68), Expect = 0.65
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = -2
Query: 303 RAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVELILKE*ASVIQRLE 133
RAE AE + ++ +L DEL A ++K K D+LD A L A+ +Q+LE
Sbjct: 22 RAEQAEAEQKQAEERSKQLEDELAAMQKKLKGTEDELDRAQERL-----ATALQKLE 73
>AF474157-1|AAL84570.1| 247|Homo sapiens TPMsk3 protein.
Length = 247
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/53 (54%), Positives = 37/53 (69%)
Frame = -2
Query: 330 TTRLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
T +LKE RAEFAERSV L+K +D L DEL A+K KYK I ++LD A ++
Sbjct: 193 TDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDM 245
>M19714-1|AAA61226.1| 264|Homo sapiens TPM1 protein.
Length = 264
Score = 58.4 bits (135), Expect = 5e-09
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
+LKE RAEFAERSV L+K +D L DEL A+K KYK I ++LD A ++
Sbjct: 211 KLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDM 261
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -2
Query: 303 RAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLD 190
RAE AE + + +L DELV+ ++K K D+LD
Sbjct: 1 RAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELD 38
>M19713-1|AAA61225.1| 284|Homo sapiens TPM1 protein.
Length = 284
Score = 58.4 bits (135), Expect = 5e-09
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
+LKE RAEFAERSV L+K +D L DEL A+K KYK I ++LD A ++
Sbjct: 231 KLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDM 281
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -2
Query: 303 RAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLD 190
RAE AE + + +L DELV+ ++K K D+LD
Sbjct: 21 RAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELD 58
>BC007433-1|AAH07433.1| 284|Homo sapiens tropomyosin 1 (alpha)
protein.
Length = 284
Score = 58.4 bits (135), Expect = 5e-09
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
+LKE RAEFAERSV L+K +D L DEL A+K KYK I ++LD A ++
Sbjct: 231 KLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDM 281
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -2
Query: 303 RAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLD 190
RAE AE + + +L DELV+ ++K K D+LD
Sbjct: 21 RAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELD 58
>AY640415-1|AAT68295.1| 284|Homo sapiens tropomyosin alpha striated
muscle isoform protein.
Length = 284
Score = 58.4 bits (135), Expect = 5e-09
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
+LKE RAEFAERSV L+K +D L DEL A+K KYK I ++LD A ++
Sbjct: 231 KLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDM 281
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -2
Query: 303 RAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLD 190
RAE AE + + +L DELV+ ++K K D+LD
Sbjct: 21 RAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELD 58
>AY640414-1|AAT68294.1| 284|Homo sapiens sarcomeric tropomyosin
kappa protein.
Length = 284
Score = 58.4 bits (135), Expect = 5e-09
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
+LKE RAEFAERSV L+K +D L DEL A+K KYK I ++LD A ++
Sbjct: 231 KLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDM 281
>AK129882-1|BAC85248.1| 217|Homo sapiens protein ( Homo sapiens
cDNA FLJ26372 fis, clone HRT06233. ).
Length = 217
Score = 58.4 bits (135), Expect = 5e-09
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
+LKE RAEFAERSV L+K +D L DEL A+K KYK I ++LD A ++
Sbjct: 164 KLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDM 214
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -2
Query: 303 RAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLD 190
RAE AE + + +L DELV+ ++K K D+LD
Sbjct: 21 RAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELD 58
>X06825-1|CAA29971.1| 284|Homo sapiens protein ( Human mRNA for
skeletal beta-tropomyosin. ).
Length = 284
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
+LKE RAEFAERSV L+K +D L DE+ A+K KYK I ++LD A ++
Sbjct: 231 KLKEAETRAEFAERSVAKLEKTIDDLEDEVYAQKMKYKAISEELDNALNDI 281
>M12126-1|AAA61229.1| 131|Homo sapiens TPM2 protein.
Length = 131
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
+LKE RAEFAERSV L+K +D L DE+ A+K KYK I ++LD A ++
Sbjct: 78 KLKEAETRAEFAERSVAKLEKTIDDLEDEVYAQKMKYKAISEELDNALNDI 128
>AL133410-4|CAI10977.1| 284|Homo sapiens tropomyosin 2 (beta)
protein.
Length = 284
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
+LKE RAEFAERSV L+K +D L DE+ A+K KYK I ++LD A ++
Sbjct: 231 KLKEAETRAEFAERSVAKLEKTIDDLEDEVYAQKMKYKAISEELDNALNDI 281
>AF474156-1|AAL84569.1| 203|Homo sapiens TPMsk1 protein.
Length = 203
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/42 (59%), Positives = 30/42 (71%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGD 199
+LKE RAEFAERSV L+K +D L DEL A+K KYK I +
Sbjct: 162 KLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISE 203
>M75165-1|AAB59509.1| 284|Homo sapiens tropomyosin protein.
Length = 284
Score = 48.0 bits (109), Expect = 7e-06
Identities = 24/51 (47%), Positives = 32/51 (62%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
+LKE RAEFAERSV L+K +D L + L + KE+ +I LD +EL
Sbjct: 231 KLKEAETRAEFAERSVAKLEKTIDDLEETLASAKEENVEIHQTLDQTLLEL 281
>M74817-1|AAA61230.1| 284|Homo sapiens tropomyosin-1 protein.
Length = 284
Score = 48.0 bits (109), Expect = 7e-06
Identities = 24/51 (47%), Positives = 32/51 (62%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
+LKE RAEFAERSV L+K +D L + L + KE+ +I LD +EL
Sbjct: 231 KLKEAETRAEFAERSVAKLEKTIDDLEETLASAKEENVEIHQTLDQTLLEL 281
>M12125-1|AAA36773.1| 284|Homo sapiens protein ( Human fibroblast
muscle-type tropomyosin mRNA, complete cds. ).
Length = 284
Score = 48.0 bits (109), Expect = 7e-06
Identities = 24/51 (47%), Positives = 32/51 (62%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
+LKE RAEFAERSV L+K +D L + L + KE+ +I LD +EL
Sbjct: 231 KLKEAETRAEFAERSVAKLEKTIDDLEETLASAKEENVEIHQTLDQTLLEL 281
>BC011776-1|AAH11776.1| 284|Homo sapiens tropomyosin 2 (beta)
protein.
Length = 284
Score = 48.0 bits (109), Expect = 7e-06
Identities = 24/51 (47%), Positives = 32/51 (62%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
+LKE RAEFAERSV L+K +D L + L + KE+ +I LD +EL
Sbjct: 231 KLKEAETRAEFAERSVAKLEKTIDDLEETLASAKEENVEIHQTLDQTLLEL 281
>AL133410-2|CAI10974.1| 284|Homo sapiens tropomyosin 2 (beta)
protein.
Length = 284
Score = 48.0 bits (109), Expect = 7e-06
Identities = 24/51 (47%), Positives = 32/51 (62%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
+LKE RAEFAERSV L+K +D L + L + KE+ +I LD +EL
Sbjct: 231 KLKEAETRAEFAERSVAKLEKTIDDLEETLASAKEENVEIHQTLDQTLLEL 281
>AL133410-1|CAI10975.1| 284|Homo sapiens tropomyosin 2 (beta)
protein.
Length = 284
Score = 48.0 bits (109), Expect = 7e-06
Identities = 24/51 (47%), Positives = 32/51 (62%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
+LKE RAEFAERSV L+K +D L + L + KE+ +I LD +EL
Sbjct: 231 KLKEAETRAEFAERSVAKLEKTIDDLEETLASAKEENVEIHQTLDQTLLEL 281
>AK223258-1|BAD96978.1| 284|Homo sapiens tropomyosin 2 (beta)
isoform 2 variant protein.
Length = 284
Score = 48.0 bits (109), Expect = 7e-06
Identities = 24/51 (47%), Positives = 32/51 (62%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
+LKE RAEFAERSV L+K +D L + L + KE+ +I LD +EL
Sbjct: 231 KLKEAETRAEFAERSVAKLEKTIDDLEETLASAKEENVEIHQTLDQTLLEL 281
>X04588-1|CAB37185.1| 248|Homo sapiens protein ( Human 2.5 kb mRNA
for cytoskeletal tropomyosin TM30(nm). ).
Length = 248
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = -2
Query: 330 TTRLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
T +LKE RAEFAERSV L+K +D L D+L KE++ LD ++L
Sbjct: 193 TDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQTLLDL 245
>BC072428-1|AAH72428.1| 248|Homo sapiens tropomyosin 3 protein.
Length = 248
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = -2
Query: 330 TTRLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
T +LKE RAEFAERSV L+K +D L D+L KE++ LD ++L
Sbjct: 193 TDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQTLLDL 245
>BC015403-1|AAH15403.1| 248|Homo sapiens tropomyosin 3 protein.
Length = 248
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = -2
Query: 330 TTRLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
T +LKE RAEFAERSV L+K +D L D+L KE++ LD ++L
Sbjct: 193 TDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQTLLDL 245
>BC000771-1|AAH00771.1| 248|Homo sapiens tropomyosin 3 protein.
Length = 248
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = -2
Query: 330 TTRLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
T +LKE RAEFAERSV L+K +D L D+L KE++ LD ++L
Sbjct: 193 TDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQTLLDL 245
>AL590431-9|CAH71267.1| 248|Homo sapiens tropomyosin 3 protein.
Length = 248
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = -2
Query: 330 TTRLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
T +LKE RAEFAERSV L+K +D L D+L KE++ LD ++L
Sbjct: 193 TDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQTLLDL 245
>AL590431-8|CAH71264.1| 248|Homo sapiens tropomyosin 3 protein.
Length = 248
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = -2
Query: 330 TTRLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
T +LKE RAEFAERSV L+K +D L D+L KE++ LD ++L
Sbjct: 193 TDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQTLLDL 245
>AL590431-6|CAH71265.1| 232|Homo sapiens tropomyosin 3 protein.
Length = 232
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = -2
Query: 330 TTRLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
T +LKE RAEFAERSV L+K +D L D+L KE++ LD ++L
Sbjct: 177 TDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQTLLDL 229
>AL590431-5|CAH71263.1| 224|Homo sapiens tropomyosin 3 protein.
Length = 224
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = -2
Query: 330 TTRLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
T +LKE RAEFAERSV L+K +D L D+L KE++ LD ++L
Sbjct: 169 TDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQTLLDL 221
>AL590431-3|CAH71261.1| 158|Homo sapiens tropomyosin 3 protein.
Length = 158
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = -2
Query: 330 TTRLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
T +LKE RAEFAERSV L+K +D L D+L KE++ LD ++L
Sbjct: 103 TDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQTLLDL 155
>AL590431-2|CAH71260.1| 233|Homo sapiens tropomyosin 3 protein.
Length = 233
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = -2
Query: 330 TTRLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
T +LKE RAEFAERSV L+K +D L D+L KE++ LD ++L
Sbjct: 178 TDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQTLLDL 230
>AK092712-1|BAC03956.1| 183|Homo sapiens protein ( Homo sapiens
cDNA FLJ35393 fis, clone SKNSH2000971, highly similar to
TROPOMYOSIN, CYTOSKELETAL TYPE. ).
Length = 183
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = -2
Query: 330 TTRLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
T +LKE RAEFAERSV L+K +D L D+L KE++ LD ++L
Sbjct: 128 TDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQTLLDL 180
>AB062125-1|BAB93457.1| 92|Homo sapiens cytoskeletal tropomyosin
TM30 protein.
Length = 92
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/53 (45%), Positives = 32/53 (60%)
Frame = -2
Query: 330 TTRLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
T +LKE RAEFAERSV L+K +D L D+L KE++ LD ++L
Sbjct: 37 TDKLKEAETRAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQTLLDL 89
>BC053545-1|AAH53545.1| 245|Homo sapiens tropomyosin 1 (alpha)
protein.
Length = 245
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/50 (44%), Positives = 32/50 (64%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVE 175
+LKE RAEFAERSV L+K +D L D+L + E+ + + ++L A E
Sbjct: 195 KLKEAETRAEFAERSVTKLEKSIDDLEDQLYQQLEQNRRLTNELKLALNE 244
>BC050473-1|AAH50473.1| 287|Homo sapiens TPM1 protein protein.
Length = 287
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/50 (44%), Positives = 32/50 (64%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVE 175
+LKE RAEFAERSV L+K +D L D+L + E+ + + ++L A E
Sbjct: 237 KLKEAETRAEFAERSVTKLEKSIDDLEDQLYQQLEQNRRLTNELKLALNE 286
>AB209041-1|BAD92278.1| 303|Homo sapiens TPM1 protein variant
protein.
Length = 303
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/50 (44%), Positives = 32/50 (64%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVE 175
+LKE RAEFAERSV L+K +D L D+L + E+ + + ++L A E
Sbjct: 253 KLKEAETRAEFAERSVTKLEKSIDDLEDQLYQQLEQNRRLTNELKLALNE 302
>X12369-1|CAA30930.1| 227|Homo sapiens tropomyosin (227 AA)
protein.
Length = 227
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/51 (43%), Positives = 31/51 (60%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
+LKE RAEFAERSV L+K +D L +++ KE+ + LD +EL
Sbjct: 174 KLKEAETRAEFAERSVTKLEKSIDDLEEKVAHAKEENLSMHQMLDQTLLEL 224
>M19715-1|AAA61227.1| 229|Homo sapiens TPM1 protein.
Length = 229
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/51 (43%), Positives = 31/51 (60%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
+LKE RAEFAERSV L+K +D L +++ KE+ + LD +EL
Sbjct: 176 KLKEAETRAEFAERSVTKLEKSIDDLEEKVAHAKEENLSMHQMLDQTLLEL 226
>M19267-1|AAA36771.1| 284|Homo sapiens protein ( Human tropomyosin
mRNA, complete cds. ).
Length = 284
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/51 (43%), Positives = 31/51 (60%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
+LKE RAEFAERSV L+K +D L +++ KE+ + LD +EL
Sbjct: 231 KLKEAETRAEFAERSVTKLEKSIDDLEEKVAHAKEENLSMHQMLDQTLLEL 281
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -2
Query: 303 RAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLD 190
RAE AE + + +L DELV+ ++K K D+LD
Sbjct: 21 RAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELD 58
>AK131384-1|BAD18535.1| 326|Homo sapiens protein ( Homo sapiens
cDNA FLJ16459 fis, clone BRCAN2002473, moderately
similar to Tropomyosin, fibroblast isoform 2. ).
Length = 326
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/51 (43%), Positives = 31/51 (60%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
+LKE RAEFAERSV L+K +D L +++ KE+ + LD +EL
Sbjct: 273 KLKEAETRAEFAERSVTKLEKSIDDLEEKVAHAKEENLSMHQMLDQTLLEL 323
>AY004867-1|AAF87083.1| 247|Homo sapiens tropomyosin isoform
protein.
Length = 247
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = -2
Query: 330 TTRLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
T +LKE RAEFAERSV L+K +D L + L ++ E+ + + ++L +L
Sbjct: 193 TDKLKEAETRAEFAERSVAKLEKTIDDLEERLYSQLERNRLLSNELKLTLHDL 245
>AL590431-10|CAH71268.1| 247|Homo sapiens tropomyosin 3 protein.
Length = 247
Score = 43.6 bits (98), Expect = 2e-04
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = -2
Query: 330 TTRLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
T +LKE RAEFAERSV L+K +D L + L ++ E+ + + ++L +L
Sbjct: 193 TDKLKEAETRAEFAERSVAKLEKTIDDLEERLYSQLERNRLLSNELKLTLHDL 245
>X05276-1|CAA28888.1| 248|Homo sapiens protein ( Human mRNA for
fibroblast tropomyosin TM30 (pl). ).
Length = 248
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/51 (43%), Positives = 30/51 (58%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
+LKE RAEFAER+V L+K +D L ++L KE+ + LD EL
Sbjct: 195 KLKEAETRAEFAERTVAKLEKTIDDLEEKLAQAKEENVGLHQTLDQTLNEL 245
>M12127-1|AAA36774.1| 131|Homo sapiens protein ( Human cytoskeletal
tropomyosin isoform (3.0 kb) mRNA, 3' end. ).
Length = 131
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/51 (43%), Positives = 30/51 (58%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
+LKE RAEFAER+V L+K +D L ++L KE+ + LD EL
Sbjct: 78 KLKEAETRAEFAERTVAKLEKTIDDLEEKLAQAKEENVGLHQTLDQTLNEL 128
>BT019634-1|AAV38440.1| 248|Homo sapiens tropomyosin 4 protein.
Length = 248
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/51 (43%), Positives = 30/51 (58%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
+LKE RAEFAER+V L+K +D L ++L KE+ + LD EL
Sbjct: 195 KLKEAETRAEFAERTVAKLEKTIDDLEEKLAQAKEENVGLHQTLDQTLNEL 245
>BC067225-1|AAH67225.1| 248|Homo sapiens tropomyosin 4 protein.
Length = 248
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/51 (43%), Positives = 30/51 (58%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
+LKE RAEFAER+V L+K +D L ++L KE+ + LD EL
Sbjct: 195 KLKEAETRAEFAERTVAKLEKTIDDLEEKLAQAKEENVGLHQTLDQTLNEL 245
>BC037576-1|AAH37576.1| 248|Homo sapiens tropomyosin 4 protein.
Length = 248
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/51 (43%), Positives = 30/51 (58%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
+LKE RAEFAER+V L+K +D L ++L KE+ + LD EL
Sbjct: 195 KLKEAETRAEFAERTVAKLEKTIDDLEEKLAQAKEENVGLHQTLDQTLNEL 245
>BC002827-1|AAH02827.1| 248|Homo sapiens tropomyosin 4 protein.
Length = 248
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/51 (43%), Positives = 30/51 (58%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
+LKE RAEFAER+V L+K +D L ++L KE+ + LD EL
Sbjct: 195 KLKEAETRAEFAERTVAKLEKTIDDLEEKLAQAKEENVGLHQTLDQTLNEL 245
>AK023385-1|BAB14554.1| 284|Homo sapiens protein ( Homo sapiens
cDNA FLJ13323 fis, clone OVARC1001731, highly similar to
TROPOMYOSIN ALPHA CHAIN, FIBROBLAST ISOFORM F2. ).
Length = 284
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/51 (43%), Positives = 30/51 (58%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
+LKE RAEFAER+V L+K +D L ++L KE+ + LD EL
Sbjct: 231 KLKEAETRAEFAERTVAKLEKTIDDLEEKLAQAKEENVGLHQTLDQTLNEL 281
>DQ424903-1|ABD83668.1| 245|Homo sapiens tropomyosin 1 alpha
variant 6 protein.
Length = 245
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = -2
Query: 318 KEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVE 175
KE RAEFAERSV L+K +D L D+L + E+ + + ++L A E
Sbjct: 197 KEAETRAEFAERSVTKLEKSIDDLEDQLYQQLEQNRRLTNELKLALNE 244
>Z24727-1|CAA80853.1| 243|Homo sapiens tropomyosin isoform protein.
Length = 243
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEK 217
+LKE RAEFAERSV L+K +D L ++++ K+K
Sbjct: 194 KLKEAETRAEFAERSVTKLEKSIDDLEEKVLMPKKK 229
>BC061910-1|AAH61910.1| 92|Homo sapiens tropomyosin 3 pseudogene
protein.
Length = 92
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/53 (41%), Positives = 29/53 (54%)
Frame = -2
Query: 330 TTRLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
T LKE AE AERSV L+K +D L D+L KE++ LD ++L
Sbjct: 37 TDNLKEAETHAELAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQTLLDL 89
>DQ120714-1|ABC40673.1| 247|Homo sapiens rcTPM3 protein.
Length = 247
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = -2
Query: 330 TTRLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
T + KE AEFAERSV L+K +D L D+L KE++ LD ++L
Sbjct: 192 TDKPKEAETCAEFAERSVAKLEKTIDDLEDKLKCTKEEHLCTQRMLDQTLLDL 244
>X03541-1|CAA27243.1| 641|Homo sapiens protein ( Human mRNA of trk
oncogene. ).
Length = 641
Score = 38.3 bits (85), Expect = 0.006
Identities = 18/30 (60%), Positives = 21/30 (70%)
Frame = -2
Query: 330 TTRLKEVXARAEFAERSVQTLQKEVDRLXD 241
T +LKE RAEFAERSV L+K +D L D
Sbjct: 193 TDKLKEAETRAEFAERSVAKLEKTIDDLED 222
>AJ001055-1|CAA04505.1| 48|Homo sapiens alpha-tropomyosin protein.
Length = 48
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = -2
Query: 303 RAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
RAEFAERSV L+K +D L +++ KE+ + LD +EL
Sbjct: 2 RAEFAERSVTKLEKSIDDLEEKVAHAKEENLSMHQMLDQTLLEL 45
>AJ000147-1|CAA03930.1| 48|Homo sapiens alpha-tropomyosin protein.
Length = 48
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = -2
Query: 303 RAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVEL 172
RAEFAERSV L+K +D L +++ KE+ + LD +EL
Sbjct: 2 RAEFAERSVTKLEKSIDDLEEKVAHAKEENLSMHQMLDQTLLEL 45
>M12128-1|AAA36775.1| 96|Homo sapiens protein ( Human cytoskeletal
tropomyosin isoform (2.5 kb) mRNA, 3' end. ).
Length = 96
Score = 36.3 bits (80), Expect = 0.023
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = -2
Query: 330 TTRLKEVXARAEFAERSVQTLQKEVDRL 247
T +LKE RAEFAERSV L+K +D L
Sbjct: 69 TDKLKEAETRAEFAERSVAKLEKTIDDL 96
>AL133410-3|CAI10976.1| 322|Homo sapiens tropomyosin 2 (beta)
protein.
Length = 322
Score = 35.1 bits (77), Expect = 0.053
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRLXD 241
+LKE RAEFAERSV L+K +D L +
Sbjct: 231 KLKEAETRAEFAERSVAKLEKTIDDLEE 258
>AF362886-1|AAK51963.1| 103|Homo sapiens tropomyosin 4-anaplastic
lymphoma kinase fusion protein major isoform protein.
Length = 103
Score = 35.1 bits (77), Expect = 0.053
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = -2
Query: 330 TTRLKEVXARAEFAERSVQTLQKEVDRL 247
T +LKE RAEFAER+V L+K +D L
Sbjct: 45 TDKLKEAETRAEFAERTVAKLEKTIDDL 72
>AF209746-1|AAF17621.1| 257|Homo sapiens beta tropomyosin protein.
Length = 257
Score = 34.7 bits (76), Expect = 0.069
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRL 247
+LKE RAEFAERSV L+K +D L
Sbjct: 231 KLKEAETRAEFAERSVAKLEKTIDDL 256
>AF362887-1|AAK51964.1| 142|Homo sapiens tropomyosin 4-anaplastic
lymphoma kinase fusion protein minor isoform protein.
Length = 142
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRL 247
+LKE RAEFAER+V L+K +D L
Sbjct: 86 KLKEAETRAEFAERTVAKLEKTIDDL 111
>AF310722-1|AAK17926.1| 320|Homo sapiens tropomyosin 4-anaplastic
lymphoma kinase fusion protein protein.
Length = 320
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRL 247
+LKE RAEFAER+V L+K +D L
Sbjct: 195 KLKEAETRAEFAERTVAKLEKTIDDL 220
>AF186110-1|AAG17015.1| 227|Homo sapiens TPM4-ALK fusion
oncoprotein type 1 protein.
Length = 227
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRL 247
+LKE RAEFAER+V L+K +D L
Sbjct: 105 KLKEAETRAEFAERTVAKLEKTIDDL 130
>AF186109-1|AAG17014.1| 237|Homo sapiens TPM4-ALK fusion
oncoprotein type 2 protein.
Length = 237
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = -2
Query: 324 RLKEVXARAEFAERSVQTLQKEVDRL 247
+LKE RAEFAER+V L+K +D L
Sbjct: 195 KLKEAETRAEFAERTVAKLEKTIDDL 220
>Z26653-1|CAA81394.1| 3110|Homo sapiens laminin M chain (merosin)
protein.
Length = 3110
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = -2
Query: 303 RAEFAERSVQTLQKEVDRLXDELVAEK-EKYKDIGDDLDXAFVELILKE 160
R E ER+++ LQKE+D++ EL + E K+I +D + E +LK+
Sbjct: 1706 RDEAFERNLEGLQKEIDQMIKELRRKNLETQKEIAED-ELVAAEALLKK 1753
>U66796-1|AAB18388.1| 3110|Homo sapiens laminin alpha 2 chain protein.
Length = 3110
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = -2
Query: 303 RAEFAERSVQTLQKEVDRLXDELVAEK-EKYKDIGDDLDXAFVELILKE 160
R E ER+++ LQKE+D++ EL + E K+I +D + E +LK+
Sbjct: 1706 RDEAFERNLEGLQKEIDQMIKELRRKNLETQKEIAED-ELVAAEALLKK 1753
>AL669984-2|CAI16682.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = -2
Query: 303 RAEFAERSVQTLQKEVDRLXDELVAEK-EKYKDIGDDLDXAFVELILKE 160
R E ER+++ LQKE+D++ EL + E K+I +D + E +LK+
Sbjct: 1706 RDEAFERNLEGLQKEIDQMIKELRRKNLETQKEIAED-ELVAAEALLKK 1753
>AL590613-1|CAH70771.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = -2
Query: 303 RAEFAERSVQTLQKEVDRLXDELVAEK-EKYKDIGDDLDXAFVELILKE 160
R E ER+++ LQKE+D++ EL + E K+I +D + E +LK+
Sbjct: 1706 RDEAFERNLEGLQKEIDQMIKELRRKNLETQKEIAED-ELVAAEALLKK 1753
>AL583853-1|CAH70492.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = -2
Query: 303 RAEFAERSVQTLQKEVDRLXDELVAEK-EKYKDIGDDLDXAFVELILKE 160
R E ER+++ LQKE+D++ EL + E K+I +D + E +LK+
Sbjct: 1706 RDEAFERNLEGLQKEIDQMIKELRRKNLETQKEIAED-ELVAAEALLKK 1753
>AL513527-1|CAI15185.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = -2
Query: 303 RAEFAERSVQTLQKEVDRLXDELVAEK-EKYKDIGDDLDXAFVELILKE 160
R E ER+++ LQKE+D++ EL + E K+I +D + E +LK+
Sbjct: 1706 RDEAFERNLEGLQKEIDQMIKELRRKNLETQKEIAED-ELVAAEALLKK 1753
>AL445439-1|CAH72952.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = -2
Query: 303 RAEFAERSVQTLQKEVDRLXDELVAEK-EKYKDIGDDLDXAFVELILKE 160
R E ER+++ LQKE+D++ EL + E K+I +D + E +LK+
Sbjct: 1706 RDEAFERNLEGLQKEIDQMIKELRRKNLETQKEIAED-ELVAAEALLKK 1753
>AL356124-1|CAI22470.1| 3122|Homo sapiens laminin, alpha 2 (merosin,
congenital muscular dystrophy) protein.
Length = 3122
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = -2
Query: 303 RAEFAERSVQTLQKEVDRLXDELVAEK-EKYKDIGDDLDXAFVELILKE 160
R E ER+++ LQKE+D++ EL + E K+I +D + E +LK+
Sbjct: 1706 RDEAFERNLEGLQKEIDQMIKELRRKNLETQKEIAED-ELVAAEALLKK 1753
>AB208922-1|BAD92159.1| 1853|Homo sapiens laminin alpha 2 subunit
precursor variant protein.
Length = 1853
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = -2
Query: 303 RAEFAERSVQTLQKEVDRLXDELVAEK-EKYKDIGDDLDXAFVELILKE 160
R E ER+++ LQKE+D++ EL + E K+I +D + E +LK+
Sbjct: 441 RDEAFERNLEGLQKEIDQMIKELRRKNLETQKEIAED-ELVAAEALLKK 488
>AL096857-1|CAB51071.1| 2701|Homo sapiens hypothetical protein
protein.
Length = 2701
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -3
Query: 314 RXKHVPSSPSVPCRHCKRRSIGXKTNLSPKRRNTRTSET 198
R +H+PS P + RS + PKRR R SET
Sbjct: 1227 RAEHIPSGPLRQREESETRSESSDFEVVPKRRRQRGSET 1265
>AF488829-1|AAO49478.1| 2701|Homo sapiens HBxAg transactivated protein
2 protein.
Length = 2701
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -3
Query: 314 RXKHVPSSPSVPCRHCKRRSIGXKTNLSPKRRNTRTSET 198
R +H+PS P + RS + PKRR R SET
Sbjct: 1227 RAEHIPSGPLRQREESETRSESSDFEVVPKRRRQRGSET 1265
>AB029019-1|BAA83048.2| 1919|Homo sapiens KIAA1096 protein protein.
Length = 1919
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -3
Query: 314 RXKHVPSSPSVPCRHCKRRSIGXKTNLSPKRRNTRTSET 198
R +H+PS P + RS + PKRR R SET
Sbjct: 297 RAEHIPSGPLRQREESETRSESSDFEVVPKRRRQRGSET 335
>AL627308-5|CAH71337.1| 1719|Homo sapiens CDC42 binding protein
kinase alpha (DMPK-like) protein.
Length = 1719
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -2
Query: 288 ERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVE--LILKE*ASVIQRL 136
E+ ++TLQ+E + L ELV E+ K+ +L A + L ++E + +RL
Sbjct: 534 EKQIKTLQQEREDLNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERL 586
>AL627308-3|CAH71336.1| 1732|Homo sapiens CDC42 binding protein
kinase alpha (DMPK-like) protein.
Length = 1732
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -2
Query: 288 ERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVE--LILKE*ASVIQRL 136
E+ ++TLQ+E + L ELV E+ K+ +L A + L ++E + +RL
Sbjct: 534 EKQIKTLQQEREDLNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERL 586
>AL451047-3|CAH71183.1| 1719|Homo sapiens CDC42 binding protein
kinase alpha (DMPK-like) protein.
Length = 1719
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -2
Query: 288 ERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVE--LILKE*ASVIQRL 136
E+ ++TLQ+E + L ELV E+ K+ +L A + L ++E + +RL
Sbjct: 534 EKQIKTLQQEREDLNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERL 586
>AL451047-1|CAH71185.1| 1732|Homo sapiens CDC42 binding protein
kinase alpha (DMPK-like) protein.
Length = 1732
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -2
Query: 288 ERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVE--LILKE*ASVIQRL 136
E+ ++TLQ+E + L ELV E+ K+ +L A + L ++E + +RL
Sbjct: 534 EKQIKTLQQEREDLNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERL 586
>AL353689-9|CAI19108.1| 1719|Homo sapiens CDC42 binding protein
kinase alpha (DMPK-like) protein.
Length = 1719
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -2
Query: 288 ERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVE--LILKE*ASVIQRL 136
E+ ++TLQ+E + L ELV E+ K+ +L A + L ++E + +RL
Sbjct: 534 EKQIKTLQQEREDLNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERL 586
>AL353689-7|CAI19109.1| 1732|Homo sapiens CDC42 binding protein
kinase alpha (DMPK-like) protein.
Length = 1732
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -2
Query: 288 ERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVE--LILKE*ASVIQRL 136
E+ ++TLQ+E + L ELV E+ K+ +L A + L ++E + +RL
Sbjct: 534 EKQIKTLQQEREDLNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERL 586
>AJ518975-1|CAD57745.1| 1719|Homo sapiens CDC42 binding protein
kinase alpha (DMPK-like) protein.
Length = 1719
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -2
Query: 288 ERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVE--LILKE*ASVIQRL 136
E+ ++TLQ+E + L ELV E+ K+ +L A + L ++E + +RL
Sbjct: 534 EKQIKTLQQEREDLNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERL 586
>AB208968-1|BAD92205.1| 1702|Homo sapiens CDC42 binding protein
kinase alpha variant protein.
Length = 1702
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -2
Query: 288 ERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVE--LILKE*ASVIQRL 136
E+ ++TLQ+E + L ELV E+ K+ +L A + L ++E + +RL
Sbjct: 545 EKQIKTLQQEREDLNKELVQASERLKNQSKELKDAHCQRKLAMQEFMEINERL 597
>AL080251-3|CAI23419.1| 356|Homo sapiens novel protein protein.
Length = 356
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/66 (24%), Positives = 32/66 (48%)
Frame = -2
Query: 327 TRLKEVXARAEFAERSVQTLQKEVDRLXDELVAEKEKYKDIGDDLDXAFVELILKE*ASV 148
T + + A+ A+ + + ++++RL ELV K D DLD E +K +
Sbjct: 74 TMVDTLQEAAQEADAIQEEMNEKIERLKAELVVFKGLMSDPMTDLDTKIQEKAMKVDMDI 133
Query: 147 IQRLEV 130
+R+++
Sbjct: 134 CRRIDI 139
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,420,778
Number of Sequences: 237096
Number of extensions: 620222
Number of successful extensions: 1930
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 1848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1930
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1743854340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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