BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32527
(469 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M19494-1|AAA28935.1| 140|Drosophila melanogaster protein ( D.me... 39 0.003
BT015958-1|AAV36843.1| 140|Drosophila melanogaster RH56553p pro... 39 0.003
AL133505-2|CAB65841.1| 140|Drosophila melanogaster EG:BACH59J11... 39 0.003
AL133505-1|CAB63528.1| 154|Drosophila melanogaster EG:BACH59J11... 39 0.003
AJ250320-1|CAB65721.1| 140|Drosophila melanogaster technical kn... 39 0.003
AE014298-399|AAF45781.1| 140|Drosophila melanogaster CG7925-PB ... 39 0.003
AE014298-2744|AAF48863.1| 1895|Drosophila melanogaster CG15040-P... 31 1.0
BT025201-1|ABF17892.1| 1486|Drosophila melanogaster FI01114p pro... 29 3.1
AY061438-1|AAL28986.1| 1486|Drosophila melanogaster LD36562p pro... 29 3.1
AF356082-1|AAK49526.1| 1486|Drosophila melanogaster C2H2 zinc fi... 29 3.1
AF285778-1|AAG45962.1| 1486|Drosophila melanogaster C2H2 zinc fi... 29 3.1
AE013599-177|AAM68380.1| 1486|Drosophila melanogaster CG9403-PC,... 29 3.1
AE013599-176|AAF57358.1| 1486|Drosophila melanogaster CG9403-PA,... 29 3.1
AE013599-175|AAS64777.1| 1582|Drosophila melanogaster CG9403-PD,... 29 3.1
AY094669-1|AAM11022.1| 1122|Drosophila melanogaster GH03394p pro... 29 4.1
AY075312-1|AAL68179.1| 919|Drosophila melanogaster GH01967p pro... 29 4.1
AE014298-1481|AAF46623.2| 1122|Drosophila melanogaster CG32676-P... 29 4.1
AE013599-1036|AAF58836.2| 919|Drosophila melanogaster CG30011-P... 29 4.1
AE013599-1035|AAF58837.2| 932|Drosophila melanogaster CG30011-P... 29 4.1
AE014298-590|AAN09115.1| 432|Drosophila melanogaster CG32790-PA... 28 7.2
>M19494-1|AAA28935.1| 140|Drosophila melanogaster protein (
D.melanogaster tko (technical knockout) locus mRNA
encoding tko gene product,complete cds. ).
Length = 140
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +1
Query: 4 PASGITCXEHNVVLVRVGRLKDCPGVETK 90
P G EHN+VL RVGRL+D PGV+ K
Sbjct: 96 PGIGHNLQEHNIVLCRVGRLQDVPGVKLK 124
Score = 31.9 bits (69), Expect = 0.44
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 71 VPAWKLKCVRGKHDLSHVIKQ 133
VP KLK VRG +DL+HV+K+
Sbjct: 118 VPGVKLKAVRGVYDLAHVVKK 138
>BT015958-1|AAV36843.1| 140|Drosophila melanogaster RH56553p
protein.
Length = 140
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +1
Query: 4 PASGITCXEHNVVLVRVGRLKDCPGVETK 90
P G EHN+VL RVGRL+D PGV+ K
Sbjct: 96 PGIGHNLQEHNIVLCRVGRLQDVPGVKLK 124
Score = 31.9 bits (69), Expect = 0.44
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 71 VPAWKLKCVRGKHDLSHVIKQ 133
VP KLK VRG +DL+HV+K+
Sbjct: 118 VPGVKLKAVRGVYDLAHVVKK 138
>AL133505-2|CAB65841.1| 140|Drosophila melanogaster
EG:BACH59J11.1,FBgn0003714;tko protein.
Length = 140
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +1
Query: 4 PASGITCXEHNVVLVRVGRLKDCPGVETK 90
P G EHN+VL RVGRL+D PGV+ K
Sbjct: 96 PGIGHNLQEHNIVLCRVGRLQDVPGVKLK 124
Score = 31.9 bits (69), Expect = 0.44
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 71 VPAWKLKCVRGKHDLSHVIKQ 133
VP KLK VRG +DL+HV+K+
Sbjct: 118 VPGVKLKAVRGVYDLAHVVKK 138
>AL133505-1|CAB63528.1| 154|Drosophila melanogaster
EG:BACH59J11.1,FBgn0003714;tko protein.
Length = 154
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +1
Query: 4 PASGITCXEHNVVLVRVGRLKDCPGVETK 90
P G EHN+VL RVGRL+D PGV+ K
Sbjct: 110 PGIGHNLQEHNIVLCRVGRLQDVPGVKLK 138
Score = 31.9 bits (69), Expect = 0.44
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 71 VPAWKLKCVRGKHDLSHVIKQ 133
VP KLK VRG +DL+HV+K+
Sbjct: 132 VPGVKLKAVRGVYDLAHVVKK 152
>AJ250320-1|CAB65721.1| 140|Drosophila melanogaster technical
knockout protein protein.
Length = 140
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +1
Query: 4 PASGITCXEHNVVLVRVGRLKDCPGVETK 90
P G EHN+VL RVGRL+D PGV+ K
Sbjct: 96 PGIGHNLQEHNIVLCRVGRLQDVPGVKLK 124
Score = 31.9 bits (69), Expect = 0.44
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 71 VPAWKLKCVRGKHDLSHVIKQ 133
VP KLK VRG +DL+HV+K+
Sbjct: 118 VPGVKLKAVRGVYDLAHVVKK 138
>AE014298-399|AAF45781.1| 140|Drosophila melanogaster CG7925-PB
protein.
Length = 140
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +1
Query: 4 PASGITCXEHNVVLVRVGRLKDCPGVETK 90
P G EHN+VL RVGRL+D PGV+ K
Sbjct: 96 PGIGHNLQEHNIVLCRVGRLQDVPGVKLK 124
Score = 31.9 bits (69), Expect = 0.44
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 71 VPAWKLKCVRGKHDLSHVIKQ 133
VP KLK VRG +DL+HV+K+
Sbjct: 118 VPGVKLKAVRGVYDLAHVVKK 138
>AE014298-2744|AAF48863.1| 1895|Drosophila melanogaster CG15040-PA
protein.
Length = 1895
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/54 (29%), Positives = 29/54 (53%)
Frame = +1
Query: 157 ARNDHNNATDSSIQIQNHLFQLRCQHNTLVECQNINKNVNSTTGSKKSHSPEKN 318
++N +NN ++IQ +N Q R Q+N + Q+ N+N N K+ + +N
Sbjct: 1730 SKNQNNN--QNTIQSRNQNMQSRNQNNNQINIQSKNQNNNQNNIQSKNQNNNQN 1781
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/67 (22%), Positives = 31/67 (46%)
Frame = +1
Query: 127 QTEXVGXEGHARNDHNNATDSSIQIQNHLFQLRCQHNTLVECQNINKNVNSTTGSKKSHS 306
Q++ E + ++ + N S Q + Q + Q+NT Q+ N+N N T ++ +
Sbjct: 1687 QSKNENNENNFQSKNQNNIQSKNQDNQYNIQSKNQNNTQNSIQSKNQNNNQNTIQSRNQN 1746
Query: 307 PEKNRRN 327
+ +N
Sbjct: 1747 MQSRNQN 1753
>BT025201-1|ABF17892.1| 1486|Drosophila melanogaster FI01114p
protein.
Length = 1486
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 229 QHNTLVECQNINKNVNSTTGSKKSHS 306
+H+ L +C N N N NS + S SHS
Sbjct: 864 KHDLLPDCTNSNSNSNSCSSSTYSHS 889
>AY061438-1|AAL28986.1| 1486|Drosophila melanogaster LD36562p
protein.
Length = 1486
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 229 QHNTLVECQNINKNVNSTTGSKKSHS 306
+H+ L +C N N N NS + S SHS
Sbjct: 864 KHDLLPDCTNSNSNSNSCSSSTYSHS 889
>AF356082-1|AAK49526.1| 1486|Drosophila melanogaster C2H2 zinc
finger transcriptionfactor JING protein.
Length = 1486
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 229 QHNTLVECQNINKNVNSTTGSKKSHS 306
+H+ L +C N N N NS + S SHS
Sbjct: 864 KHDLLPDCTNSNSNSNSCSSSTYSHS 889
>AF285778-1|AAG45962.1| 1486|Drosophila melanogaster C2H2 zinc
finger protein protein.
Length = 1486
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 229 QHNTLVECQNINKNVNSTTGSKKSHS 306
+H+ L +C N N N NS + S SHS
Sbjct: 864 KHDLLPDCTNSNSNSNSCSSSTYSHS 889
>AE013599-177|AAM68380.1| 1486|Drosophila melanogaster CG9403-PC,
isoform C protein.
Length = 1486
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 229 QHNTLVECQNINKNVNSTTGSKKSHS 306
+H+ L +C N N N NS + S SHS
Sbjct: 864 KHDLLPDCTNSNSNSNSCSSSTYSHS 889
>AE013599-176|AAF57358.1| 1486|Drosophila melanogaster CG9403-PA,
isoform A protein.
Length = 1486
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 229 QHNTLVECQNINKNVNSTTGSKKSHS 306
+H+ L +C N N N NS + S SHS
Sbjct: 864 KHDLLPDCTNSNSNSNSCSSSTYSHS 889
>AE013599-175|AAS64777.1| 1582|Drosophila melanogaster CG9403-PD,
isoform D protein.
Length = 1582
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 229 QHNTLVECQNINKNVNSTTGSKKSHS 306
+H+ L +C N N N NS + S SHS
Sbjct: 960 KHDLLPDCTNSNSNSNSCSSSTYSHS 985
>AY094669-1|AAM11022.1| 1122|Drosophila melanogaster GH03394p
protein.
Length = 1122
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = +1
Query: 100 RQARPVTRHQTEXVGXEGHARNDHNNATDSSIQIQNHLFQLRCQHN-TLVECQNINKNVN 276
R R RH GH ++++ SS +H F C N V + +
Sbjct: 591 RITRTKHRHYHGQGHGHGHGNGHSSSSSSSSSSSSSHFFNHACAGNQPSVNAAAFATSSS 650
Query: 277 STTGSKKSHSPEKNRRNKL 333
S++ S S S ++R KL
Sbjct: 651 SSSSSPSSSSSSPSKRRKL 669
>AY075312-1|AAL68179.1| 919|Drosophila melanogaster GH01967p
protein.
Length = 919
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +1
Query: 100 RQARPVTRHQTEXVGXEGHARNDHNNATDSSIQIQNHL-FQLRCQHNTLVECQNINKNVN 276
+QA + +HQ E N N N +Q +N++ QN N N N
Sbjct: 54 QQAEQIQQHQQERTLSTKFDLNLFNELDQMEFNNLNRSQYQNNNNNNSISNNQNSNNNTN 113
Query: 277 STTGSKKSHSPEKNRRNKLGGY 342
+T G ++ + +N R+ + GY
Sbjct: 114 TTNGISENLNQIQN-RHFISGY 134
>AE014298-1481|AAF46623.2| 1122|Drosophila melanogaster CG32676-PA
protein.
Length = 1122
Score = 28.7 bits (61), Expect = 4.1
Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 1/79 (1%)
Frame = +1
Query: 100 RQARPVTRHQTEXVGXEGHARNDHNNATDSSIQIQNHLFQLRCQHN-TLVECQNINKNVN 276
R R RH GH ++++ SS +H F C N V + +
Sbjct: 591 RITRTKHRHYHGQGHGHGHGNGHSSSSSSSSSSSSSHFFNHACAGNQPSVNAAAFATSSS 650
Query: 277 STTGSKKSHSPEKNRRNKL 333
S++ S S S ++R KL
Sbjct: 651 SSSSSPSSSSSSPSKRRKL 669
>AE013599-1036|AAF58836.2| 919|Drosophila melanogaster CG30011-PA,
isoform A protein.
Length = 919
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +1
Query: 100 RQARPVTRHQTEXVGXEGHARNDHNNATDSSIQIQNHL-FQLRCQHNTLVECQNINKNVN 276
+QA + +HQ E N N N +Q +N++ QN N N N
Sbjct: 54 QQAEQIQQHQQERTLSTKFDLNLFNELDQMEFNNLNRSQYQNNNNNNSISNNQNSNNNTN 113
Query: 277 STTGSKKSHSPEKNRRNKLGGY 342
+T G ++ + +N R+ + GY
Sbjct: 114 TTNGISENLNQIQN-RHFISGY 134
>AE013599-1035|AAF58837.2| 932|Drosophila melanogaster CG30011-PC,
isoform C protein.
Length = 932
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Frame = +1
Query: 100 RQARPVTRHQTEXVGXEGHARNDHNNATDSSIQIQNHL-FQLRCQHNTLVECQNINKNVN 276
+QA + +HQ E N N N +Q +N++ QN N N N
Sbjct: 54 QQAEQIQQHQQERTLSTKFDLNLFNELDQMEFNNLNRSQYQNNNNNNSISNNQNSNNNTN 113
Query: 277 STTGSKKSHSPEKNRRNKLGGY 342
+T G ++ + +N R+ + GY
Sbjct: 114 TTNGISENLNQIQN-RHFISGY 134
>AE014298-590|AAN09115.1| 432|Drosophila melanogaster CG32790-PA
protein.
Length = 432
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = +1
Query: 157 ARNDHNNATDSSIQIQNHLFQLRCQHNTLVECQNINKNVNSTTGSKKSHSPEKN---RRN 327
+ +H N D I+ R ++L+ N N N N+ + S+S N ++
Sbjct: 17 SNGNHTNGNDHETSIKRRKRCSRDDDSSLINNNNNNNNNNNNNNNNNSNSNNNNLPQKKR 76
Query: 328 KLGG 339
K GG
Sbjct: 77 KQGG 80
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,958,208
Number of Sequences: 53049
Number of extensions: 338215
Number of successful extensions: 1026
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1580609772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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