Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32516
         (455 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68217-1|CAA92465.1|  461|Caenorhabditis elegans Hypothetical pr...    35   0.032
U88308-19|AAB42328.1| 1927|Caenorhabditis elegans Hypothetical p...    29   1.2  
Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical p...    28   3.7  
Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical pr...    28   3.7  
U70855-1|AAB09161.1|  390|Caenorhabditis elegans Hypothetical pr...    28   3.7  
U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myos...    28   3.7  
Z81077-12|CAH19097.1|  316|Caenorhabditis elegans Hypothetical p...    27   4.9  
AF016440-9|AAK68353.2|  287|Caenorhabditis elegans Hypothetical ...    27   4.9  
Z27079-10|CAD90180.1|  658|Caenorhabditis elegans Hypothetical p...    27   6.5  
Z27079-9|CAA81596.2|  660|Caenorhabditis elegans Hypothetical pr...    27   6.5  
U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical pr...    27   6.5  

>Z68217-1|CAA92465.1|  461|Caenorhabditis elegans Hypothetical
           protein F58G6.1 protein.
          Length = 461

 Score = 34.7 bits (76), Expect = 0.032
 Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
 Frame = +3

Query: 264 KSLQGALGDANGKAKEALEQSRQNIXRTAEELRKAHPDVEKNATALREKLQAAVQ--NTV 437
           K L+G +G A     E  +Q   N+ + ++   K H DV+  ++ALR  L A  Q  +T+
Sbjct: 19  KLLEG-IGKAKATQDEVFDQHAANLNKQSKSCEKLHKDVKNYSSALRTLLSAEKQLRDTI 77

Query: 438 QESXE 452
           +++ E
Sbjct: 78  RDAYE 82


>U88308-19|AAB42328.1| 1927|Caenorhabditis elegans Hypothetical
           protein C32E8.11 protein.
          Length = 1927

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 20/80 (25%), Positives = 35/80 (43%)
 Frame = +3

Query: 168 FNSLTKSKDAQDFIKAWKDGSXSVLQQLNAFXKSLQGALGDANGKAKEALEQSRQNIXRT 347
           FN L + KDA   I  W + +  V  +L      L   +     K++E  +     +   
Sbjct: 558 FNILLRLKDAISMIIGWAETNEEVHNRLMIMCLELMNRMPPVYTKSEE--DTYELTVTIN 615

Query: 348 AEELRKAHPDVEKNATALRE 407
            E  R +H DV K++T++ +
Sbjct: 616 GESCRISHFDVLKSSTSVHQ 635


>Z75550-15|CAA99931.2| 2003|Caenorhabditis elegans Hypothetical
            protein F20G4.3 protein.
          Length = 2003

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 15/79 (18%), Positives = 35/79 (44%)
 Frame = +3

Query: 219  KDGSXSVLQQLNAFXKSLQGALGDANGKAKEALEQSRQNIXRTAEELRKAHPDVEKNATA 398
            +D +    +++    K ++  L +A  K  E   +  + + +  E+   A  +    A  
Sbjct: 1362 RDDALDAQEKIEKEVKEVKSLLAEARKKLDEENREVMEELRKKKEKELSAEKERADMAEQ 1421

Query: 399  LREKLQAAVQNTVQESXEV 455
             R+K + A +  +QE+ +V
Sbjct: 1422 ARDKAERAKKKAIQEAEDV 1440


>Z75538-4|CAA99841.2| 2003|Caenorhabditis elegans Hypothetical protein
            F20G4.3 protein.
          Length = 2003

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 15/79 (18%), Positives = 35/79 (44%)
 Frame = +3

Query: 219  KDGSXSVLQQLNAFXKSLQGALGDANGKAKEALEQSRQNIXRTAEELRKAHPDVEKNATA 398
            +D +    +++    K ++  L +A  K  E   +  + + +  E+   A  +    A  
Sbjct: 1362 RDDALDAQEKIEKEVKEVKSLLAEARKKLDEENREVMEELRKKKEKELSAEKERADMAEQ 1421

Query: 399  LREKLQAAVQNTVQESXEV 455
             R+K + A +  +QE+ +V
Sbjct: 1422 ARDKAERAKKKAIQEAEDV 1440


>U70855-1|AAB09161.1|  390|Caenorhabditis elegans Hypothetical
           protein K08F11.3 protein.
          Length = 390

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = -2

Query: 265 LXKALSCCSTXSEPSFQALMKSCASFDLVSELNC 164
           L K  S   T  E  F+AL+  CA   L+ EL C
Sbjct: 117 LYKGYSNFHTVQEKIFKALVDMCAEARLIGELEC 150


>U49263-1|AAC47238.1| 2003|Caenorhabditis elegans non-muscle myosin
            heavy chain II protein.
          Length = 2003

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 15/79 (18%), Positives = 35/79 (44%)
 Frame = +3

Query: 219  KDGSXSVLQQLNAFXKSLQGALGDANGKAKEALEQSRQNIXRTAEELRKAHPDVEKNATA 398
            +D +    +++    K ++  L +A  K  E   +  + + +  E+   A  +    A  
Sbjct: 1362 RDDALDAQEKIEKEVKEVKSLLAEARKKLDEENREVMEELRKKKEKELSAEKERADMAEQ 1421

Query: 399  LREKLQAAVQNTVQESXEV 455
             R+K + A +  +QE+ +V
Sbjct: 1422 ARDKAERAKKKAIQEAEDV 1440


>Z81077-12|CAH19097.1|  316|Caenorhabditis elegans Hypothetical
           protein F36A2.14 protein.
          Length = 316

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 13/47 (27%), Positives = 26/47 (55%)
 Frame = +3

Query: 300 KAKEALEQSRQNIXRTAEELRKAHPDVEKNATALREKLQAAVQNTVQ 440
           K+K+    SR+N  +TAE++ ++  D  K A   ++ + +  Q  V+
Sbjct: 94  KSKDESGSSRKNSKKTAEDMDQSSDDTTKPAEETKKTVSSKKQKKVK 140


>AF016440-9|AAK68353.2|  287|Caenorhabditis elegans Hypothetical
           protein F29G9.7 protein.
          Length = 287

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 168 FNSLTKSKDAQDFIKAWKDG 227
           +NS+   +D  +FIK W DG
Sbjct: 166 YNSMLTERDVNEFIKLWLDG 185


>Z27079-10|CAD90180.1|  658|Caenorhabditis elegans Hypothetical
           protein T05G5.9b protein.
          Length = 658

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 14/52 (26%), Positives = 29/52 (55%)
 Frame = +3

Query: 285 GDANGKAKEALEQSRQNIXRTAEELRKAHPDVEKNATALREKLQAAVQNTVQ 440
           G ++G  K+     ++++ + A++      +++KN TAL EKL+A +    Q
Sbjct: 15  GSSSGGGKKLDSLPKEDLVKFAKKQVAHVAEMKKNQTALMEKLKAKMSELEQ 66


>Z27079-9|CAA81596.2|  660|Caenorhabditis elegans Hypothetical
           protein T05G5.9a protein.
          Length = 660

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 14/52 (26%), Positives = 29/52 (55%)
 Frame = +3

Query: 285 GDANGKAKEALEQSRQNIXRTAEELRKAHPDVEKNATALREKLQAAVQNTVQ 440
           G ++G  K+     ++++ + A++      +++KN TAL EKL+A +    Q
Sbjct: 15  GSSSGGGKKLDSLPKEDLVKFAKKQVAHVAEMKKNQTALMEKLKAKMSELEQ 66


>U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical protein
            R07G3.3c protein.
          Length = 1316

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
 Frame = +3

Query: 165  QFNSLTKSKDAQDF---IKAWKDGSXSVLQQLNAFXKSLQGALGDANGKAKEALEQSRQN 335
            Q+ SL+ +   Q+    +K   DGS S ++ L +  + ++ +  +A  +A  A  + R+ 
Sbjct: 1111 QYESLSANLTNQNTTMEVKVNTDGSSSTVENLQSLLQFVRQSKDEATSRAMTAEVEMRRL 1170

Query: 336  IXRTAEELRKAHPDVEKNATALREKL---QAAVQNTVQESXE 452
               TAE  R  +  + K      EK+    A V+  V+E+ +
Sbjct: 1171 RAETAEYERGRNELLRKIRDLETEKIATTAALVEKAVEEAED 1212


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,300,600
Number of Sequences: 27780
Number of extensions: 88422
Number of successful extensions: 453
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 453
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)