Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32515
(353 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 231 1e-61
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 229 3e-61
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 229 3e-61
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 229 3e-61
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 229 3e-61
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 229 3e-61
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 229 3e-61
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 229 3e-61
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 220 3e-58
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 190 2e-49
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 188 1e-48
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 186 3e-48
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 186 3e-48
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 182 5e-47
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 136 4e-33
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 119 5e-28
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 89 6e-19
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 73 6e-14
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 47 4e-06
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 47 4e-06
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 46 8e-06
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.18
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 30 0.53
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 0.71
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 2.2
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 28 2.2
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 27 2.8
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 27 2.8
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 27 2.8
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 27 2.8
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 27 2.8
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 3.8
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 3.8
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 26 6.6
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 26 6.6
AF125960-3|AAD14737.1| 446|Caenorhabditis elegans Hypothetical ... 26 8.7
AF077541-9|AAC64633.1| 909|Caenorhabditis elegans Cysteinyl trn... 26 8.7
AF077541-8|AAK68426.1| 908|Caenorhabditis elegans Cysteinyl trn... 26 8.7
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 26 8.7
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 231 bits (565), Expect = 1e-61
Identities = 103/105 (98%), Positives = 104/105 (99%)
Frame = +1
Query: 37 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 216
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 217 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPXEHPVL 351
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAP EHPVL
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 105
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 229 bits (561), Expect = 3e-61
Identities = 102/105 (97%), Positives = 104/105 (99%)
Frame = +1
Query: 37 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 216
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 217 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPXEHPVL 351
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAP EHPVL
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 105
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 229 bits (561), Expect = 3e-61
Identities = 102/105 (97%), Positives = 104/105 (99%)
Frame = +1
Query: 37 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 216
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 217 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPXEHPVL 351
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAP EHPVL
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 105
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 229 bits (561), Expect = 3e-61
Identities = 102/105 (97%), Positives = 104/105 (99%)
Frame = +1
Query: 37 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 216
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 217 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPXEHPVL 351
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAP EHPVL
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 105
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 229 bits (561), Expect = 3e-61
Identities = 102/105 (97%), Positives = 104/105 (99%)
Frame = +1
Query: 37 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 216
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 217 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPXEHPVL 351
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAP EHPVL
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 105
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 229 bits (561), Expect = 3e-61
Identities = 101/105 (96%), Positives = 104/105 (99%)
Frame = +1
Query: 37 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 216
MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 217 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPXEHPVL 351
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAP EHPVL
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 105
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 229 bits (561), Expect = 3e-61
Identities = 102/105 (97%), Positives = 104/105 (99%)
Frame = +1
Query: 37 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 216
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 217 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPXEHPVL 351
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAP EHPVL
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 105
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 229 bits (561), Expect = 3e-61
Identities = 102/105 (97%), Positives = 104/105 (99%)
Frame = +1
Query: 37 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 216
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 217 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPXEHPVL 351
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAP EHPVL
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL 105
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 220 bits (537), Expect = 3e-58
Identities = 96/103 (93%), Positives = 102/103 (99%)
Frame = +1
Query: 43 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 222
++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 223 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPXEHPVL 351
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELR+AP EHPVL
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVL 104
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 190 bits (464), Expect = 2e-49
Identities = 84/87 (96%), Positives = 86/87 (98%)
Frame = +1
Query: 91 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIIT 270
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+T
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 271 NWDDMEKIWHHTFYNELRVAPXEHPVL 351
NWDDMEKIWHHTFYNELRVAP EHPVL
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVL 91
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 188 bits (458), Expect = 1e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +1
Query: 37 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 216
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 217 SKRGILTLKYPIEHGIITNWDDMEKI 294
SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 3e-48
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +1
Query: 37 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 216
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 217 SKRGILTLKYPIEHGIITNWDDMEKI 294
SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 3e-48
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +1
Query: 37 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 216
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 217 SKRGILTLKYPIEHGIITNWDDMEKI 294
SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 182 bits (444), Expect = 5e-47
Identities = 82/83 (98%), Positives = 83/83 (100%)
Frame = +1
Query: 37 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 216
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 217 SKRGILTLKYPIEHGIITNWDDM 285
SKRGILTLKYPIEHGI+TNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 136 bits (329), Expect = 4e-33
Identities = 59/61 (96%), Positives = 60/61 (98%)
Frame = +1
Query: 169 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPXEHPV 348
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAP EHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 349 L 351
L
Sbjct: 61 L 61
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 119 bits (287), Expect = 5e-28
Identities = 53/107 (49%), Positives = 76/107 (71%), Gaps = 4/107 (3%)
Frame = +1
Query: 43 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 213
D DV A +V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKA 61
Query: 214 QSKRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPXEHPVL 351
+S RG+ +++YP+EHGI+ NW DMEKIW + F ++L++ P EHPVL
Sbjct: 62 ESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVL 108
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 89.4 bits (212), Expect = 6e-19
Identities = 45/100 (45%), Positives = 63/100 (63%), Gaps = 3/100 (3%)
Frame = +1
Query: 61 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 234
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 235 TLKYPIEHGIITNWDDMEKIWHHTFYNE-LRVAPXEHPVL 351
+ YP+++GI+ NWDDM +W HTF E L + P E +L
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLL 108
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 72.9 bits (171), Expect = 6e-14
Identities = 41/115 (35%), Positives = 57/115 (49%), Gaps = 13/115 (11%)
Frame = +1
Query: 37 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 180
M + A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 181 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPXEH 342
D ++GDEA S T+KYPI HGI+ +WD ME+ W + LR P +H
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 46.8 bits (106), Expect = 4e-06
Identities = 26/86 (30%), Positives = 43/86 (50%)
Frame = +1
Query: 52 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 231
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 232 LTLKYPIEHGIITNWDDMEKIWHHTF 309
++ PIE G + NWD ++IW TF
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 46.8 bits (106), Expect = 4e-06
Identities = 26/86 (30%), Positives = 43/86 (50%)
Frame = +1
Query: 52 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 231
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 232 LTLKYPIEHGIITNWDDMEKIWHHTF 309
++ PIE G + NWD ++IW TF
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF 82
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 46.0 bits (104), Expect = 8e-06
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Frame = +1
Query: 46 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QS 219
D+V+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 220 KR------GILTLKYP---------IEHGIITNWDDMEKIWHHTFYNELRVAPXEHPVL 351
KR G + P ++ G+I +W+ EKI H++ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVL 127
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.18
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 68 STMAPACARPVSPATTRPAPSSRP 139
+T AP PATTRPAP+S+P
Sbjct: 317 ATRAPPATTRAPPATTRPAPASQP 340
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 29.9 bits (64), Expect = 0.53
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +2
Query: 59 RL*STMAPACARPVSPATTRPAPSSRPSWVALATRA 166
RL S +AP A P S A TR APS + VA RA
Sbjct: 231 RLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 266
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 29.5 bits (63), Expect = 0.71
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -1
Query: 182 PIPTITPWWRGRPTMDGKTARGASSPAKPALHMPEPL 72
P T TP RGRP + ++ P P P+PL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 2.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 91 KAGFAGDDAPRAVFPSIVGRPRHQG 165
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 27.9 bits (59), Expect = 2.2
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +2
Query: 68 STMAPACARPVSPATTRPAPSSRPSWVALATRA 166
S +AP A P S A TR APS + VA RA
Sbjct: 238 SAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 270
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 232 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 149
GY GP P + GP P PG EG
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 414
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 232 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 149
GY GP P + GP P PG EG
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 413
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 232 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 149
GY GP P + GP P PG EG
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 413
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 232 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 149
GY GP P + GP P PG EG
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 414
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -2
Query: 232 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 149
GY GP P + GP P PG EG
Sbjct: 423 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 450
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 244 YPIEHGIITN-WDDMEKIWHHTFYNELRVAPXEHP 345
+P E+ I+++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 244 YPIEHGIITN-WDDMEKIWHHTFYNELRVAPXEHP 345
+P E+ I+++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +1
Query: 145 GRPRHQGVMVGMGQKDSYVGD----EAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTF 309
G PRH+ + G+ ++++V + EA + + K HG +WD++ K + TF
Sbjct: 629 GIPRHE-ISHGVSDEEAFVREASIIEAVKLKNLRNKKAGEFHGTTKSWDNITKSEYGTF 686
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +1
Query: 145 GRPRHQGVMVGMGQKDSYVGD----EAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTF 309
G PRH+ + G+ ++++V + EA + + K HG +WD++ K + TF
Sbjct: 629 GIPRHE-ISHGVSDEEAFVREASIIEAVKLKNLRNKKAGEFHGTTKSWDNITKSEYGTF 686
>AF125960-3|AAD14737.1| 446|Caenorhabditis elegans Hypothetical
protein T12B3.1 protein.
Length = 446
Score = 25.8 bits (54), Expect = 8.7
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 262 IITNWDDMEKIWHHTFY 312
++ NWD EK W TF+
Sbjct: 382 VLQNWDQTEKDWSPTFW 398
>AF077541-9|AAC64633.1| 909|Caenorhabditis elegans Cysteinyl trna
synthetase protein1, isoform a protein.
Length = 909
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 218 LWASSPT*ESFWPIPTITPWWRGRP 144
LW SS E FWP + W GRP
Sbjct: 484 LWKSSKDGEPFWP----SEWGNGRP 504
>AF077541-8|AAK68426.1| 908|Caenorhabditis elegans Cysteinyl trna
synthetase protein1, isoform b protein.
Length = 908
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 218 LWASSPT*ESFWPIPTITPWWRGRP 144
LW SS E FWP + W GRP
Sbjct: 483 LWKSSKDGEPFWP----SEWGNGRP 503
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 25.8 bits (54), Expect = 8.7
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 150 PSPPGRDGRYGPE 188
P PPG+DG GP+
Sbjct: 267 PGPPGKDGEAGPD 279
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,466,815
Number of Sequences: 27780
Number of extensions: 182915
Number of successful extensions: 896
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 471339352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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