BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32513
(415 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p pro... 217 6e-57
AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-P... 217 6e-57
AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-P... 217 6e-57
D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal prot... 211 3e-55
BT023919-1|ABB36423.1| 1124|Drosophila melanogaster RH42017p pro... 28 5.6
AL031765-7|CAA21125.1| 1398|Drosophila melanogaster EG:22E5.8 pr... 28 5.6
AE014298-317|AAF45711.1| 1398|Drosophila melanogaster CG4290-PA ... 28 5.6
AE013599-1564|AAM68647.1| 737|Drosophila melanogaster CG8772-PB... 28 5.6
BT024246-1|ABC86308.1| 205|Drosophila melanogaster IP15948p pro... 27 7.4
BT021421-1|AAX33569.1| 1098|Drosophila melanogaster LD02690p pro... 27 7.4
AY051840-1|AAK93264.1| 561|Drosophila melanogaster LD34444p pro... 27 7.4
AE014298-256|AAN09058.1| 205|Drosophila melanogaster CG32806-PA... 27 7.4
AE013599-2039|AAF58149.3| 1098|Drosophila melanogaster CG8155-PA... 27 7.4
>BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p
protein.
Length = 261
Score = 217 bits (529), Expect = 6e-57
Identities = 99/129 (76%), Positives = 110/129 (85%)
Frame = +3
Query: 27 PKHGMLDKLGGVYAPRPSTGPHKLRECLPLVIFLXNRLKYALTGNEVLKIVKQRLIKVDG 206
PK MLDKLGGV+APRPSTGPHKLRE LPL+IFL NRLKYAL G EV KIV QRL+KVDG
Sbjct: 15 PKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDG 74
Query: 207 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRXTPEEAKYKLCKVKRVATGPX 386
KVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHR + EEAKYKLCKVK+ G
Sbjct: 75 KVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAK 134
Query: 387 NVPYLVTHD 413
VP+LVTHD
Sbjct: 135 GVPFLVTHD 143
>AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-PB,
isoform B protein.
Length = 261
Score = 217 bits (529), Expect = 6e-57
Identities = 99/129 (76%), Positives = 110/129 (85%)
Frame = +3
Query: 27 PKHGMLDKLGGVYAPRPSTGPHKLRECLPLVIFLXNRLKYALTGNEVLKIVKQRLIKVDG 206
PK MLDKLGGV+APRPSTGPHKLRE LPL+IFL NRLKYAL G EV KIV QRL+KVDG
Sbjct: 15 PKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDG 74
Query: 207 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRXTPEEAKYKLCKVKRVATGPX 386
KVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHR + EEAKYKLCKVK+ G
Sbjct: 75 KVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAK 134
Query: 387 NVPYLVTHD 413
VP+LVTHD
Sbjct: 135 GVPFLVTHD 143
>AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-PA,
isoform A protein.
Length = 261
Score = 217 bits (529), Expect = 6e-57
Identities = 99/129 (76%), Positives = 110/129 (85%)
Frame = +3
Query: 27 PKHGMLDKLGGVYAPRPSTGPHKLRECLPLVIFLXNRLKYALTGNEVLKIVKQRLIKVDG 206
PK MLDKLGGV+APRPSTGPHKLRE LPL+IFL NRLKYAL G EV KIV QRL+KVDG
Sbjct: 15 PKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVMQRLVKVDG 74
Query: 207 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRXTPEEAKYKLCKVKRVATGPX 386
KVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHR + EEAKYKLCKVK+ G
Sbjct: 75 KVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAK 134
Query: 387 NVPYLVTHD 413
VP+LVTHD
Sbjct: 135 GVPFLVTHD 143
>D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal protein
S4 protein.
Length = 261
Score = 211 bits (515), Expect = 3e-55
Identities = 97/129 (75%), Positives = 108/129 (83%)
Frame = +3
Query: 27 PKHGMLDKLGGVYAPRPSTGPHKLRECLPLVIFLXNRLKYALTGNEVLKIVKQRLIKVDG 206
PK MLDKLGGV+APRPSTGPHKLRE LPL+ FL NRLKYAL G EV KIV QRL+KV G
Sbjct: 15 PKAWMLDKLGGVFAPRPSTGPHKLRESLPLLTFLRNRLKYALNGAEVTKIVMQRLVKVYG 74
Query: 207 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRXTPEEAKYKLCKVKRVATGPX 386
KVRTDPTYPAG+MDV+++EKT E FRL+YDVKGRF IHR + EEAKYKLCKVK+ G
Sbjct: 75 KVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAK 134
Query: 387 NVPYLVTHD 413
VP+LVTHD
Sbjct: 135 GVPFLVTHD 143
>BT023919-1|ABB36423.1| 1124|Drosophila melanogaster RH42017p
protein.
Length = 1124
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -1
Query: 148 AYFRRFXRKITRGKHSRNLWGPVDGLGAYTPPSLSNIP-CFGS 23
+Y + + ++RG N GP D L P ++P C GS
Sbjct: 630 SYSKSLSQNLSRGSSKSNCSGPYDSLDFALPSGKGSLPSCMGS 672
>AL031765-7|CAA21125.1| 1398|Drosophila melanogaster EG:22E5.8
protein.
Length = 1398
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -1
Query: 148 AYFRRFXRKITRGKHSRNLWGPVDGLGAYTPPSLSNIP-CFGS 23
+Y + + ++RG N GP D L P ++P C GS
Sbjct: 904 SYSKSLSQNLSRGSSKSNCSGPYDSLDFALPSGKGSLPSCMGS 946
>AE014298-317|AAF45711.1| 1398|Drosophila melanogaster CG4290-PA
protein.
Length = 1398
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -1
Query: 148 AYFRRFXRKITRGKHSRNLWGPVDGLGAYTPPSLSNIP-CFGS 23
+Y + + ++RG N GP D L P ++P C GS
Sbjct: 904 SYSKSLSQNLSRGSSKSNCSGPYDSLDFALPSGKGSLPSCMGS 946
>AE013599-1564|AAM68647.1| 737|Drosophila melanogaster CG8772-PB,
isoform B protein.
Length = 737
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +3
Query: 147 ALTGNEVLKIVKQRLIKV-DGKVRTDPTYP 233
++TG E++++VKQ KV + KV PT P
Sbjct: 45 SMTGEELIELVKQNAAKVEEEKVEIPPTEP 74
>BT024246-1|ABC86308.1| 205|Drosophila melanogaster IP15948p
protein.
Length = 205
Score = 27.5 bits (58), Expect = 7.4
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 38 DVGQTWRCVCTETVNRSPQVARVLAPGDFPXESSEV 145
D+ Q R VC E ++R ARV AP + P + EV
Sbjct: 140 DLLQPRRSVCDEMISRDALPARV-APSEMPTKPQEV 174
>BT021421-1|AAX33569.1| 1098|Drosophila melanogaster LD02690p
protein.
Length = 1098
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 80 NRSPQVARVLAPGDFPXESSEVCFDRKRSPENCETTPHK 196
NR+ ++ + L+ G+ E +V FDRK SP ET P K
Sbjct: 575 NRNVKLEQNLSAGE-ETEDDDV-FDRKESPSFLETNPFK 611
>AY051840-1|AAK93264.1| 561|Drosophila melanogaster LD34444p
protein.
Length = 561
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 80 NRSPQVARVLAPGDFPXESSEVCFDRKRSPENCETTPHK 196
NR+ ++ + L+ G+ E +V FDRK SP ET P K
Sbjct: 38 NRNVKLEQNLSAGE-ETEDDDV-FDRKESPSFLETNPFK 74
>AE014298-256|AAN09058.1| 205|Drosophila melanogaster CG32806-PA,
isoform A protein.
Length = 205
Score = 27.5 bits (58), Expect = 7.4
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 38 DVGQTWRCVCTETVNRSPQVARVLAPGDFPXESSEV 145
D+ Q R VC E ++R ARV AP + P + EV
Sbjct: 140 DLLQPRRSVCDEMISRDALPARV-APSEMPTKPQEV 174
>AE013599-2039|AAF58149.3| 1098|Drosophila melanogaster CG8155-PA
protein.
Length = 1098
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 80 NRSPQVARVLAPGDFPXESSEVCFDRKRSPENCETTPHK 196
NR+ ++ + L+ G+ E +V FDRK SP ET P K
Sbjct: 575 NRNVKLEQNLSAGE-ETEDDDV-FDRKESPSFLETNPFK 611
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,690,197
Number of Sequences: 53049
Number of extensions: 383094
Number of successful extensions: 1041
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1230182214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -