Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32507
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    23   1.9  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    23   1.9  
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              23   2.5  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    21   7.5  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   10.0 
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   10.0 
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    21   10.0 

>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 9   YEYSFKNTLTNDNKYIKK 62
           Y+Y++ N   N+N Y KK
Sbjct: 94  YKYNYNNNNYNNNNYNKK 111


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 9   YEYSFKNTLTNDNKYIKK 62
           Y+Y++ N   N+N Y KK
Sbjct: 94  YKYNYNNNNYNNNNYNKK 111


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -3

Query: 442 SNVNLWLKLEKSFILFKSLYLYHSIRY 362
           SNV+   K EKSF+  K +Y  + I +
Sbjct: 114 SNVDSSDKCEKSFMFMKCMYEVNPIAF 140


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 6/27 (22%), Positives = 17/27 (62%)
 Frame = +2

Query: 422 EPKVNITEQK*MAFLVCTLHMIFKELH 502
           E  VN+ + +   ++   LH++++++H
Sbjct: 33  EANVNLLKNRTGRYMFTYLHLLYQDVH 59


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/28 (25%), Positives = 15/28 (53%)
 Frame = -1

Query: 441 VMLTFGSNWRNHLYCLNLSIYIIALDIF 358
           ++++ G  WRNH   +  + ++  L  F
Sbjct: 126 LLISTGQKWRNHRKLIAPTFHLNVLKSF 153


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +3

Query: 9   YEYSFKNTLTNDNKYIKKKN 68
           Y+Y++ N   N+N Y    N
Sbjct: 329 YKYNYNNNNYNNNNYNNNYN 348


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 119 FPALKNLVNFSFATFEIKHIFNGSYKN 199
           F  +KN  NF   + + + IFNG + N
Sbjct: 103 FIVVKNDDNFRNISEKYQEIFNGYFLN 129


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,607
Number of Sequences: 438
Number of extensions: 2277
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)