Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV32494
(516 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 36 0.003
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 33 0.019
SPAP27G11.04c |||tRNA specific adenosine deaminase subunit Tad3 ... 29 0.31
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 28 0.95
SPCC4G3.19 |alp16||gamma tubulin complex subunit Alp16 |Schizosa... 27 1.3
SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|c... 27 2.2
SPBC16E9.08 |mcp4|mug101|sequence orphan|Schizosaccharomyces pom... 27 2.2
SPAC1952.01 ||SPAC1B3.19|Pig-U|Schizosaccharomyces pombe|chr 1||... 26 3.8
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 26 3.8
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 26 3.8
SPCC1442.13c |||RNA-binding protein, G-pathc type|Schizosaccharo... 25 5.1
SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces pomb... 25 5.1
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 25 6.7
SPCC31H12.06 |mug111||sequence orphan|Schizosaccharomyces pombe|... 25 6.7
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 25 6.7
SPAC29A4.15 |||serine-tRNA ligase|Schizosaccharomyces pombe|chr ... 25 8.9
SPCPJ732.02c |||xylulose kinase |Schizosaccharomyces pombe|chr 3... 25 8.9
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 36.3 bits (80), Expect = 0.003
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +2
Query: 296 HITSEDFVRKYLGLFSEDDFNKESVQLIAGIVDMDKDGYISFSEFQAFEGLLCVPDALYK 475
H+ +F + Y F D + + + D DK+GYI F EF + + K
Sbjct: 42 HLNKSEFQKIYKQFFPFGD-PSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDK 100
Query: 476 T--AFQLFDTNGNGL 514
AFQL+D + NGL
Sbjct: 101 LIWAFQLYDLDNNGL 115
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 33.5 bits (73), Expect = 0.019
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +2
Query: 266 YATVEKNGEKHITSEDFVRKYLGLFSEDDFNKESVQLIAGIVDMDKDGYISFSE 427
++ V+++G + ++F+ L +FS +E ++ I D+D+DGYIS E
Sbjct: 62 FSVVDEDGGGDVDFQEFINS-LSVFSVHGNKEEKLKFAFKIYDIDRDGYISNGE 114
Score = 25.8 bits (54), Expect = 3.8
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 284 NGEKHITSEDFVRKYLGLFSEDDFNKESVQLIAGIVDMDKDGYISFSEFQ 433
NGE ++ ++ +G +D ++ V VD D+DG ISF EF+
Sbjct: 112 NGELYLV----LKMMVGTNLREDQLQQIVDKTIMEVDKDRDGKISFEEFK 157
>SPAP27G11.04c |||tRNA specific adenosine deaminase subunit Tad3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 315
Score = 29.5 bits (63), Expect = 0.31
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -1
Query: 393 STIPAMSWTDSLLKSSSENNPRYFLTKSSLVICFSPFFST--VAYFKKISCSFSES 232
+T+P + W L+KS E R T++ + CF P +++ Y K+I ES
Sbjct: 14 ATVPELDWPFKLIKSHLET--RKLETENVWIACFEPKYASKVTQYVKQIRSKQKES 67
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 27.9 bits (59), Expect = 0.95
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 389 VDMDKDGYISFSEFQAFEGLLCVPDALYKTAFQLFDTNGNG 511
VD GY+S SE +F +P+ + + L DTN NG
Sbjct: 270 VDKAHKGYVSGSEAYSFFLASKLPEDVLAQIWDLSDTNSNG 310
>SPCC4G3.19 |alp16||gamma tubulin complex subunit Alp16
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 759
Score = 27.5 bits (58), Expect = 1.3
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -1
Query: 348 SSENNPRYFLTKSSLVICFSPFFSTVAYFKKISCSF 241
S +N Y + L+ C +P+F + K+SC++
Sbjct: 330 SCQNTISYPIALQCLIYCSNPYFKRLELALKVSCAY 365
>SPAC824.02 |||GPI inositol deacylase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1142
Score = 26.6 bits (56), Expect = 2.2
Identities = 15/56 (26%), Positives = 31/56 (55%)
Frame = -1
Query: 465 ASGTHSRPSNAWNSENDM*PSLSMSTIPAMSWTDSLLKSSSENNPRYFLTKSSLVI 298
+SG + R +NA + ND P+L + IP+++ + S SS ++K ++++
Sbjct: 22 SSGFYKR-NNANTASNDEKPNLEQNDIPSVTSSGSSTPSSISIEKEIKISKGNVIV 76
>SPBC16E9.08 |mcp4|mug101|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 26.6 bits (56), Expect = 2.2
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Frame = +2
Query: 164 KSLFGSLLTQASCQEGAGYLKRADSEKLHEIFLKYAT--VEKNGEKHITSEDFVRKYLGL 337
K+L G T+ + +E Y D +E+ AT VE N +K + +YL
Sbjct: 243 KALKGRRTTKRNDKENYNY---PDFSNDNELLFSLATLIVENNPKKENIIPKYYLRYLQR 299
Query: 338 FSEDDFNKESVQL 376
S + NKE +++
Sbjct: 300 LSRTEINKEIIEI 312
>SPAC1952.01 ||SPAC1B3.19|Pig-U|Schizosaccharomyces pombe|chr
1|||Manual
Length = 408
Score = 25.8 bits (54), Expect = 3.8
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 322 SYKIFACDMLLTVLLNGGVL 263
SY I+AC M LTV +N L
Sbjct: 166 SYAIYACCMALTVFINPNAL 185
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 25.8 bits (54), Expect = 3.8
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Frame = +2
Query: 239 EKLHEIFLKYATVEKNGEKHITSEDF--VRKYLGLFSEDDFNKESVQLIAGIVDMDKDGY 412
E++ E ++ +++ + +ITS + V + LG +Q + VD D +G
Sbjct: 9 EQIAEFREAFSLFDRDQDGNITSNELGVVMRSLG----QSPTAAELQDMINEVDADGNGT 64
Query: 413 ISFSEFQAFEGLLCVP---DALYKTAFQLFDTNGNG 511
I F+EF + + AF++FD +GNG
Sbjct: 65 IDFTEFLTMMARKMKDTDNEEEVREAFKVFDKDGNG 100
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 25.8 bits (54), Expect = 3.8
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 233 DSEKLHEIFLKYATVEKNGEKHITSEDFVRKYLGL 337
D+E LH LKY ++ N + S DFV L L
Sbjct: 2376 DTEMLHNNLLKYGIIDFNQNSMLVS-DFVLPVLSL 2409
>SPCC1442.13c |||RNA-binding protein, G-pathc
type|Schizosaccharomyces pombe|chr 3|||Manual
Length = 207
Score = 25.4 bits (53), Expect = 5.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 263 KYATVEKNGEKHITSEDFVRKYLGLFSE 346
K +K KH+++ED + KY LF E
Sbjct: 31 KIVQPKKKPSKHLSNEDALEKYEMLFGE 58
>SPAP8A3.08 |cdc4||myosin II light chain|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 141
Score = 25.4 bits (53), Expect = 5.1
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 461 DALYKTAFQLFDTNGNG 511
D+ YK AF LFD +G G
Sbjct: 5 DSPYKQAFSLFDRHGTG 21
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 25.0 bits (52), Expect = 6.7
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 269 ATVEKNGEKH-ITSEDFVRKYLGLFSEDDFNKESVQLIAGIVDMDKD 406
+TV +N H ++ F+R+ D+F K S L G + +D+D
Sbjct: 1103 STVIRNNSSHELSLVAFIREMAMPVPNDEFKKISTILARGYLALDED 1149
>SPCC31H12.06 |mug111||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 468
Score = 25.0 bits (52), Expect = 6.7
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -1
Query: 327 YFLTKSSLVICFSPFFSTVAYFKKISCSF 241
YF S+L I + F T AYF S SF
Sbjct: 101 YFFFASTLSILYMDDFPTCAYFVIFSISF 129
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 25.0 bits (52), Expect = 6.7
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 392 DMDKDGYISFSEFQAFEGLL 451
D D G +SF EFQ F LL
Sbjct: 343 DADHSGKLSFEEFQHFVSLL 362
>SPAC29A4.15 |||serine-tRNA ligase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 450
Score = 24.6 bits (51), Expect = 8.9
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -3
Query: 478 SFVQSVRHAQQTFKRLELGERYVTVL 401
+F + + HA+ +K LEL R V ++
Sbjct: 307 AFTEMINHAEDFYKSLELPYRIVAIV 332
>SPCPJ732.02c |||xylulose kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 555
Score = 24.6 bits (51), Expect = 8.9
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +2
Query: 230 ADSEKLHEIFLKYATVEKNGEKHI--TSEDFVRKY 328
A + K ++ K TVE NG KH+ + FV+KY
Sbjct: 226 AGNSKGPDLANKLGTVEINGAKHLGPIGKYFVKKY 260
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,049,744
Number of Sequences: 5004
Number of extensions: 40443
Number of successful extensions: 118
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 117
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 208287218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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